Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0535.Seq
         (698 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U13642-8|AAG00040.1|  428|Caenorhabditis elegans Similar to tran...    29   2.4  
U13642-7|AAZ32791.1|  446|Caenorhabditis elegans Similar to tran...    29   2.4  

>U13642-8|AAG00040.1|  428|Caenorhabditis elegans Similar to
           transporter of divalentcations protein 1, isoform a
           protein.
          Length = 428

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 433 CS*VLTREVRFTVYPLATLLSFVTSRTSPPHV 528
           C  +L+  V  T+YPL+T    +  +T+PPH+
Sbjct: 229 CCLLLSVAVFSTMYPLSTYTGMILLQTTPPHL 260


>U13642-7|AAZ32791.1|  446|Caenorhabditis elegans Similar to
           transporter of divalentcations protein 1, isoform b
           protein.
          Length = 446

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 433 CS*VLTREVRFTVYPLATLLSFVTSRTSPPHV 528
           C  +L+  V  T+YPL+T    +  +T+PPH+
Sbjct: 247 CCLLLSVAVFSTMYPLSTYTGMILLQTTPPHL 278


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,008,687
Number of Sequences: 27780
Number of extensions: 172130
Number of successful extensions: 284
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 284
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)