Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0534.Seq
(645 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 63 3e-11
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 55 1e-08
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 44 1e-05
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 39 7e-04
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 38 0.001
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 28 1.3
SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomy... 27 2.3
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 5.3
SPAC3G6.03c |||Maf-like protein|Schizosaccharomyces pombe|chr 1|... 25 7.1
SPBC3B9.06c |apg3||autophagy associated protein Apg3 |Schizosacc... 25 9.3
SPCC1450.11c |cek1||serine/threonine protein kinase Cek1|Schizos... 25 9.3
SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity ... 25 9.3
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 63.3 bits (147), Expect = 3e-11
Identities = 32/87 (36%), Positives = 43/87 (49%)
Frame = +1
Query: 247 PMATMDASQRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQSEEEVYFSASVLRYYAGK 426
P ++QRG YLA +ETLD GK + + +V +A RYY G
Sbjct: 78 PWRKFSSAQRGRCLSRLADCIEQNLEYLASIETLDNGKSITLARGDVQAAADCFRYYGGW 137
Query: 427 ADKILGNTIPSDGEVLTFTMKEPVGVC 507
ADK G TI +D + +T EP+GVC
Sbjct: 138 ADKDYGQTIETDIKRFAYTRHEPIGVC 164
Score = 52.4 bits (120), Expect = 5e-08
Identities = 24/63 (38%), Positives = 37/63 (58%)
Frame = +2
Query: 65 KVDVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRY 244
K ++ LFINN+ VD+V +P E +I +VA+ D+ D+D+AV A+ AF
Sbjct: 17 KTYIQPVGLFINNQHVDSVHGGRVKVYSPSTEKLICEVADADEEDVDIAVKVARAAFQTD 76
Query: 245 SPW 253
+PW
Sbjct: 77 APW 79
Score = 48.0 bits (109), Expect = 1e-06
Identities = 23/44 (52%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = +3
Query: 462 RRSPYVHHE--GACRSVRQIIPWNYPIPMMSWKIAPALAAGCTV 587
+R Y HE G C QIIPWN+P M +WKIAPA+A G T+
Sbjct: 151 KRFAYTRHEPIGVCG---QIIPWNFPFLMCAWKIAPAVACGNTI 191
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 54.8 bits (126), Expect = 1e-08
Identities = 27/61 (44%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +1
Query: 328 LAELETLDCGKP-VKQSEEEVYFSASVLRYYAGKADKILGNTIPSDGEVLTFTMKEPVGV 504
LA +E +D GKP V + +V + ++LRY AG ADKI G IP+ E L + + P+GV
Sbjct: 98 LAAIEAMDSGKPLVSNARGDVDGTIALLRYCAGWADKIYGQVIPTGPEKLAYAKRTPIGV 157
Query: 505 C 507
C
Sbjct: 158 C 158
Score = 47.2 bits (107), Expect = 2e-06
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +3
Query: 510 QIIPWNYPIPMMSWKIAPALAAG 578
QI+PWNYP+ M WKIAPALAAG
Sbjct: 160 QIVPWNYPLNMAGWKIAPALAAG 182
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 44.4 bits (100), Expect = 1e-05
Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Frame = +1
Query: 328 LAELETLDCGKPVKQSEEEVYFSASVLRYYAGKADKILGNTIPSDGEVLTF--TMKEPVG 501
L ++ TL+ GKP+ Q+E EV + L++YA +A + G+ PS + F ++K+PVG
Sbjct: 97 LVKMLTLENGKPLSQAEMEVTTCSGYLKWYAAEAVRTFGDVAPSSLQSQNFLISIKQPVG 156
Query: 502 V 504
V
Sbjct: 157 V 157
Score = 39.9 bits (89), Expect = 3e-04
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +2
Query: 71 DVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRY 244
D + + F+ +W+ + + KTF NP +I +VA+ + A++AA +AF Y
Sbjct: 14 DKSHAQSFVQGKWISSPNNKTFEVDNPATGEIIGKVADVSVEETKKAISAANEAFKTY 71
Score = 34.3 bits (75), Expect = 0.015
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 513 IIPWNYPIPMMSWKIAPALAAGCT 584
I PWN+P M++ K ALAAGCT
Sbjct: 161 ITPWNFPAAMIARKGGAALAAGCT 184
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 38.7 bits (86), Expect = 7e-04
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3
Query: 513 IIPWNYPIPMMSWKIAPALAAGCTV 587
I PWN+P M++ K+ ALAAGCTV
Sbjct: 166 ITPWNFPAAMITRKVGAALAAGCTV 190
Score = 31.1 bits (67), Expect = 0.14
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +2
Query: 92 FINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRY 244
+I +WV A S KTF NP + V + + A+ A +AF Y
Sbjct: 27 YIGGKWVTAASGKTFDVENPGLNETLAPVTDMSVEETRKAIKVAHEAFLSY 77
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 37.9 bits (84), Expect = 0.001
Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +3
Query: 513 IIPWNYPIPMMSWKIAPALAAG-CTV 587
I PWN+P+ M WK+ PA+A+G C V
Sbjct: 169 ITPWNFPLKMALWKLVPAIASGNCVV 194
Score = 35.9 bits (79), Expect = 0.005
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +2
Query: 89 LFINNEWVDAV--SKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRYSPWLPW 262
LFI+ ++V + + K P INP E +I A D+D AV A F R W W
Sbjct: 23 LFIDGKFVSPIEPAAKPIPLINPATEEIIGTCANASAKDVDSAVENAYNTF-RSGIWAKW 81
Score = 31.1 bits (67), Expect = 0.14
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = +1
Query: 253 ATMDASQRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQSEEEVYFSASVLRYYAGKAD 432
A QRG + LA ++T++CGKP + ++ A + YYA A+
Sbjct: 79 AKWPGKQRGLVLRKIAKMMREKRELLAGIDTINCGKPTPYALFDIDSCADMFEYYAEVAE 138
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 27.9 bits (59), Expect = 1.3
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +2
Query: 92 FINNEWVDAVSKKTFPTINPQDETVITQVAEGDKAD 199
F+ D S+ TF TI PQ+ + E K+D
Sbjct: 224 FLQQSEADQPSEDTFTTIGPQNSLTVNSTIEKHKSD 259
>SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 27.1 bits (57), Expect = 2.3
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = -1
Query: 219 AATAKSISALSPSATCVMTVSSCGLMVGKVFLLTASTHSLLINSLVYLTST 67
+ +A +SA S + TC +S+ G LTA ++++ NS ST
Sbjct: 442 SGSATLVSASSATGTCASYLSAAGSSATNAISLTADSNAVSRNSSASTMST 492
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.8 bits (54), Expect = 5.3
Identities = 22/73 (30%), Positives = 33/73 (45%)
Frame = -2
Query: 503 TPTGSFMVNVRTSPSEGMVFPNILSAFPA*YLSTLAEKYTSSSDCFTGFPQSKVSSSARY 324
+PT S + +S S F + LS+ S+ + TSSS + S SSS
Sbjct: 299 SPT-STSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFSS 357
Query: 323 LDWDSRSSASLSN 285
S+SS+S S+
Sbjct: 358 TTSSSKSSSSFSS 370
Score = 25.4 bits (53), Expect = 7.1
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = -2
Query: 470 TSPSEGMVFPNILSAFPA*YLSTLAEKYTSSSDCFTGFPQSKVSSSARYLDWDSRSSASL 291
TS S + + S+ P ST++ +SSS + S +SSS+ + + SS+++
Sbjct: 284 TSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTI 343
Query: 290 SN 285
S+
Sbjct: 344 SS 345
>SPAC3G6.03c |||Maf-like protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 236
Score = 25.4 bits (53), Expect = 7.1
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 117 LSAKKPSLPSTHKMKQS*HRSLKEIRRILIWPSPQQRK 230
+ PS S ++ S HR LK+ R IL SP++++
Sbjct: 1 MDTSPPSYDSHFTLETSMHRQLKDKRIILASGSPRRKQ 38
>SPBC3B9.06c |apg3||autophagy associated protein Apg3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 275
Score = 25.0 bits (52), Expect = 9.3
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 95 INNEWVDAVSKKTFPTINPQDETVITQVAEGDKADI 202
+N EWVD + T + QD+ I+ + D +DI
Sbjct: 85 VNEEWVDIETDDTRNKDDDQDDDAISSI-HSDTSDI 119
>SPCC1450.11c |cek1||serine/threonine protein kinase
Cek1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1338
Score = 25.0 bits (52), Expect = 9.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 518 TVELPHTNDVLENSTSLSCRMYRVLKPAEQTPLT 619
T+EL + N LEN +S ++ +K A T +T
Sbjct: 343 TIELDNYNPSLENCSSAVIALWEDIKTAVDTKIT 376
>SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 408
Score = 25.0 bits (52), Expect = 9.3
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 4/28 (14%)
Frame = -2
Query: 371 CFTGFPQSKVSSSA----RYLDWDSRSS 300
CF G P S +SSA RYL W S S+
Sbjct: 13 CFVGLPASGKTSSAMKLSRYLTWMSVST 40
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,743,095
Number of Sequences: 5004
Number of extensions: 57576
Number of successful extensions: 182
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 181
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 289756512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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