Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0533.Seq
         (748 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    32   0.004
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    26   0.28 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   7.9  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 32.3 bits (70), Expect = 0.004
 Identities = 13/36 (36%), Positives = 24/36 (66%)
 Frame = +2

Query: 401 TSLRDPAFYQLYNRIVEYIVEFKQYLKPYTQDKLYF 508
           T++RDP FY+ ++ I +   E+K  L  YT+++L +
Sbjct: 392 TAMRDPIFYRWHSYIDDIFQEYKATLPRYTENQLNY 427


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 407 LRDPAFYQLYNRIVEYIVEFKQYLKPYTQDKLYF 508
           LRDP F++ +  I +   EFK  L  YT  +L +
Sbjct: 394 LRDPLFFRWHAYIDDMFQEFKATLPRYTVAQLNY 427


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 633 SMDVVVLNLLFTKVHAVAGVEFKVLE 556
           S DV+   LLF  +   +GV F+ +E
Sbjct: 155 SQDVIANVLLFIFIVVKSGVAFQTIE 180


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,706
Number of Sequences: 336
Number of extensions: 3429
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)