Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0531.Seq
(698 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34512| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_47930| Best HMM Match : Vicilin_N (HMM E-Value=1.3) 31 0.90
SB_22053| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_30326| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_30515| Best HMM Match : Lyase_8 (HMM E-Value=1.2e-05) 29 3.6
SB_53423| Best HMM Match : Pox_A32 (HMM E-Value=0.0095) 28 8.4
SB_41396| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=0.92) 28 8.4
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_34512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1080
Score = 31.1 bits (67), Expect = 0.90
Identities = 26/61 (42%), Positives = 33/61 (54%)
Frame = +2
Query: 263 QPEAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYYPQQPENPIFSPTQATELADPTE 442
Q E A A S V +P+R QT + S P+Q N+V PQ E P S T A LA+P E
Sbjct: 625 QHELAVADSP-VVCLPER--QTHSGESATPEQTNQVVEPQM-EEPQGS-TSAQHLAEPDE 679
Query: 443 K 445
+
Sbjct: 680 Q 680
>SB_47930| Best HMM Match : Vicilin_N (HMM E-Value=1.3)
Length = 769
Score = 31.1 bits (67), Expect = 0.90
Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 4/97 (4%)
Frame = +2
Query: 269 EAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYYP---QQPENPIFSP-TQATELADP 436
+ AQAPST Q+ + R++T S Q + P + P + + P Q A P
Sbjct: 181 QTAQAPSTPQIQLSIMRQETPESDSEATQTYLHIENPVSTRPPTDNVNEPDIQPNTRAQP 240
Query: 437 TEKIELYSTTLVPVAKATEAPAAPNYQSRKYSKLRSP 547
T + + + L P A A A + K K SP
Sbjct: 241 TSRQQETAAPLSPFAAAQSVFARKANKGTKRKKELSP 277
>SB_22053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1670
Score = 31.1 bits (67), Expect = 0.90
Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 4/97 (4%)
Frame = +2
Query: 269 EAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYYP---QQPENPIFSP-TQATELADP 436
+ AQAPST Q+ + R++T S Q + P + P + + P Q A P
Sbjct: 848 QTAQAPSTPQIQLSIMRQETPESDSEATQTYLHIENPVSTRPPTDNVNEPDIQPNTRAQP 907
Query: 437 TEKIELYSTTLVPVAKATEAPAAPNYQSRKYSKLRSP 547
T + + + L P A A A + K K SP
Sbjct: 908 TSRQQETAAPLSPFAAAQSVFARKANKGTKRKKELSP 944
>SB_30326| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1346
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/73 (31%), Positives = 36/73 (49%)
Frame = +2
Query: 317 RRQTLADTSYVPQQENEVYYPQQPENPIFSPTQATELADPTEKIELYSTTLVPVAKATEA 496
R T T + +EV +QP+ P+ + T TE+A PT K+ S+T +P T
Sbjct: 973 RTTTQKATYSLESTTSEVKLTKQPKIPVSNLTITTEIAAPT-KLTPPSSTELPA--PTRD 1029
Query: 497 PAAPNYQSRKYSK 535
PA P + + +K
Sbjct: 1030 PAQPGKMTDEVTK 1042
>SB_30515| Best HMM Match : Lyase_8 (HMM E-Value=1.2e-05)
Length = 1364
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 213 YYNPRAVGGGMAAFCTASPKP 275
YYNP+ +GGGMA TA P
Sbjct: 926 YYNPKDLGGGMAMRGTAGKTP 946
>SB_53423| Best HMM Match : Pox_A32 (HMM E-Value=0.0095)
Length = 1148
Score = 27.9 bits (59), Expect = 8.4
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Frame = +2
Query: 323 QTLADTSYVPQQENEVYYPQQPENPIFSPTQATELADPTEKIELYST-----TLVPVAKA 487
QT + S +P+Q N+V Q E P S T A LA+P ++ + T + +A+
Sbjct: 649 QTHSGESAIPEQTNQV-VASQMEEPQGS-TSARHLAEPDKQAAEQAAHEPARTPLALAER 706
Query: 488 TEAPAAPNYQSRKYSKLRSPRR 553
+P P Q + ++R+ RR
Sbjct: 707 ITSPEPPATQPKHPGQVRAGRR 728
>SB_41396| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=0.92)
Length = 806
Score = 27.9 bits (59), Expect = 8.4
Identities = 20/86 (23%), Positives = 35/86 (40%)
Frame = +2
Query: 329 LADTSYVPQQENEVYYPQQPENPIFSPTQATELADPTEKIELYSTTLVPVAKATEAPAAP 508
L +T + + N++ P E +P T P + E+ T V +
Sbjct: 374 LTETQFATKSLNKIR-PSCKEPAHLNPLPMTTETPPEIQAEMTKDTPQHVRSLDFSKVKV 432
Query: 509 NYQSRKYSKLRSPRRRRAVANKKKQG 586
+++ S+ R PR+ A NK+ QG
Sbjct: 433 GEEAKPKSRRRGPRKTTARKNKENQG 458
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 27.9 bits (59), Expect = 8.4
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +2
Query: 266 PEAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEV-YYPQQPENPIFSPTQATELADPTE 442
PE +AP T P+ T+A + +PQ+ + PE + T ATE + E
Sbjct: 4455 PETTEAPGT--TVAPET---TMAPETTIPQETTIAPESTEAPETTMAPETTATESTETPE 4509
Query: 443 KIELYSTTLVPVAKATEAPAA 505
+ TT+ P + T AP A
Sbjct: 4510 TTIVPETTVAP--ETTMAPEA 4528
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,498,681
Number of Sequences: 59808
Number of extensions: 468888
Number of successful extensions: 1489
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1484
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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