Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0531.Seq
(698 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g16220.1 68418.m01895 octicosapeptide/Phox/Bem1p (PB1) domain... 32 0.42
At5g66060.1 68418.m08323 oxidoreductase, 2OG-Fe(II) oxygenase fa... 29 2.2
At1g21730.1 68414.m02720 kinesin-related protein (MKRP1) Similar... 29 2.2
At3g13990.1 68416.m01766 hydroxyproline-rich glycoprotein family... 29 3.0
At1g20270.1 68414.m02531 oxidoreductase, 2OG-Fe(II) oxygenase fa... 29 3.0
At3g57170.1 68416.m06365 N-acetylglucosaminyl transferase compon... 28 5.2
At3g12500.1 68416.m01556 basic endochitinase identical to basic ... 28 5.2
At4g26830.1 68417.m03863 glycosyl hydrolase family 17 protein si... 28 6.8
At3g51510.1 68416.m05641 expressed protein 28 6.8
At5g28120.1 68418.m03396 hypothetical protein 27 9.0
At5g28110.1 68418.m03395 hypothetical protein 27 9.0
At5g18510.1 68418.m02185 hypothetical protein 27 9.0
At5g15680.1 68418.m01834 expressed protein 27 9.0
>At5g16220.1 68418.m01895 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein hypothetical proteins -
Arabidopsis thaliana contains Pfam profile PF00564: PB1
domain
Length = 476
Score = 31.9 bits (69), Expect = 0.42
Identities = 29/97 (29%), Positives = 39/97 (40%), Gaps = 8/97 (8%)
Frame = +2
Query: 263 QPEAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYYPQQPE-NPI-------FSPTQA 418
Q + Q TGQ YI TL T+Y N VYY + P+ PI +S
Sbjct: 326 QQQHIQVIYTGQPYITGNSPMTLPATAY--HHTNHVYYQRPPQPYPIYYIPVEQYSSRHV 383
Query: 419 TELADPTEKIELYSTTLVPVAKATEAPAAPNYQSRKY 529
L + Y PV + T +P AP + S+ Y
Sbjct: 384 QALPVKPSTVLNYHQVDSPVVR-TSSPLAPEFSSQVY 419
>At5g66060.1 68418.m08323 oxidoreductase, 2OG-Fe(II) oxygenase
family protein similar to prolyl 4-hydroxylase, alpha
subunit, from Rattus norvegicus [GI:474940], Mus
musculus [SP|Q60715], Homo sapiens [GI:18073925];
contains PF03171 2OG-Fe(II) oxygenase superfamily domain
Length = 267
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +3
Query: 276 HRRLQRARCTYLIVAARPLPIPATYRNKKTKSITLSNQRTRSSAPLKR 419
H L + C YLI A+P +T ++KT T S RT S L R
Sbjct: 91 HNFLTKEECKYLIELAKPHMEKSTVVDEKTGKSTDSRVRTSSGTFLAR 138
>At1g21730.1 68414.m02720 kinesin-related protein (MKRP1) Similar to
gb|U06698 neuronal kinesin heavy chain from Homo sapiens
and contains a PF|00225 Kinesin motor domain. EST
gb|AA042507 comes from this gene; identical to cDNA
MKRP1 mRNA for kinesin-related protein, GI:16902291,
kinesin-related protein [Arabidopsis thaliana]
GI:16902292
Length = 890
Score = 29.5 bits (63), Expect = 2.2
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 8/99 (8%)
Frame = +2
Query: 302 YIPDRRRQTLADTSYVPQQENEVYYPQQPENPIFSPTQATELAD--------PTEKIELY 457
Y+PDRRR+ +AD V + P+ + + T+ +K +
Sbjct: 499 YLPDRRRENMADDGAVSTVSEHLKEPRDGNSSLDEMTKDRRKNKTRGMLGWLKLKKSDGV 558
Query: 458 STTLVPVAKATEAPAAPNYQSRKYSKLRSPRRRRAVANK 574
+ TL ++A +P+ S KY++ ++ RR A A K
Sbjct: 559 AGTLPTDGNQSQASGSPS-SSSKYTQTKTTRRENAAAIK 596
>At3g13990.1 68416.m01766 hydroxyproline-rich glycoprotein family
protein
Length = 883
Score = 29.1 bits (62), Expect = 3.0
Identities = 27/92 (29%), Positives = 36/92 (39%)
Frame = +2
Query: 374 YPQQPENPIFSPTQATELADPTEKIELYSTTLVPVAKATEAPAAPNYQSRKYSKLRSPRR 553
YP P N + + AT L DP+ I + VP +A E R S L+SP
Sbjct: 740 YPTNPPNVVGN---ATGLEDPSRMINKHGNIYVPNPQA-ETSEIWMQNPRDLSSLQSPYY 795
Query: 554 RRAVANKKKQGEEASXXXXXXXXXXTXQSAHI 649
VA + G S T QS+H+
Sbjct: 796 N--VAGQSPHGAYLSSHTAHQSFNPTAQSSHM 825
>At1g20270.1 68414.m02531 oxidoreductase, 2OG-Fe(II) oxygenase
family protein similar to prolyl 4-hydroxylase, alpha
subunit, from Gallus gallus [GI:212530], Rattus
norvegicus [GI:474940], Mus musculus [SP|Q60715];
contains PF03171 2OG-Fe(II) oxygenase superfamily domain
Length = 287
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 276 HRRLQRARCTYLIVAARPLPIPATYRNKKTKSITLSNQRTRSSAPLKR 419
H L + C YLI A+P + +T + +T S RT S L+R
Sbjct: 89 HNFLSKEECEYLISLAKPHMVKSTVVDSETGKSKDSRVRTSSGTFLRR 136
>At3g57170.1 68416.m06365 N-acetylglucosaminyl transferase component
family protein / Gpi1 family protein similar to
SP|O14357 N-acetylglucosaminyl-phosphatidylinositol
biosynthetic protein gpi1 {Schizosaccharomyces pombe};
contains Pfam profile PF05024: N-acetylglucosaminyl
transferase component (Gpi1)
Length = 560
Score = 28.3 bits (60), Expect = 5.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 369 SITLSNQRTRSSAPLKRPNWLTPL 440
S++ SN ++ APLK+P W+ L
Sbjct: 49 SLSFSNSSPQTKAPLKKPKWVDDL 72
>At3g12500.1 68416.m01556 basic endochitinase identical to basic
endochitinase precursor SP:P19171 from [Arabidopsis
thaliana]
Length = 322
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = -3
Query: 342 LVSARVWRRRSGMYTWPVEGACAASGWRYRTRPYHRPQLWGCSKDCSNGS*P 187
L SA R++G P C+ GW T PY + GC C+ G P
Sbjct: 17 LSSAEQCGRQAGGALCPNGLCCSEFGWCGNTEPYCKQP--GCQSQCTPGGTP 66
>At4g26830.1 68417.m03863 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 from [Nicotiana tabacum]
Length = 448
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +3
Query: 57 IMKVMYAFVMMSCA-LLVQAYPYNPYYGNVD--SLSYGSGDSNRGGL 188
++K M A + + + L+V AYP+ Y N D SL Y N G +
Sbjct: 179 VVKPMLALLQQTSSYLMVNAYPFFAYAANADKISLDYALFKENAGNI 225
>At3g51510.1 68416.m05641 expressed protein
Length = 181
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = -1
Query: 314 DQVCTPGPLKAPV--RLRAGGTERGHTTAHSSGVVVRIVVTAHDQAS 180
D+ C P K+P G +GH + V R+VVTA + S
Sbjct: 18 DECCNRSPTKSPFPGHHPLAGRRKGHLLHYERSTVRRLVVTAATEGS 64
>At5g28120.1 68418.m03396 hypothetical protein
Length = 506
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 129 YYGNVDSLSYGSGDSNRGGLVMSR 200
Y GN+D + +G GD ++ L+ SR
Sbjct: 122 YVGNIDRVRWGPGDKDQKTLIKSR 145
>At5g28110.1 68418.m03395 hypothetical protein
Length = 493
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 129 YYGNVDSLSYGSGDSNRGGLVMSR 200
Y GN+D + +G GD ++ L+ SR
Sbjct: 122 YVGNIDRVRWGPGDKDQKTLIKSR 145
>At5g18510.1 68418.m02185 hypothetical protein
Length = 702
Score = 27.5 bits (58), Expect = 9.0
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +2
Query: 392 NPIFSPTQATELADPTEKIE 451
+P+FSP + +E+ D EK+E
Sbjct: 137 SPVFSPLECSEMRDSAEKLE 156
>At5g15680.1 68418.m01834 expressed protein
Length = 2151
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 568 SDSPSSPWAPQLRVLPALVVRSGRRFGSLGN 476
+ P SP P+L ++P RSG+ SL N
Sbjct: 1455 ASGPLSPMPPELNIVPVATGRSGQLLPSLVN 1485
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,905,088
Number of Sequences: 28952
Number of extensions: 317613
Number of successful extensions: 1054
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1054
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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