Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0526.Seq
(645 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0174 + 6142472-6142849 35 0.064
02_05_0205 + 26755024-26756217 32 0.34
07_01_0498 + 3734498-3734976,3736176-3736800 32 0.45
06_01_0672 - 4903126-4903219,4903322-4903430,4903620-4905096,490... 31 0.59
02_04_0018 - 18943015-18943734 31 0.59
11_03_0127 - 10408628-10409106,10409188-10409821 31 1.0
02_03_0276 - 17209623-17209654,17209806-17210244 31 1.0
04_04_0673 - 27168305-27168874,27168977-27169099,27169180-271694... 30 1.4
08_02_1398 + 26760069-26760267,26760349-26760635,26762394-267625... 30 1.8
02_04_0168 - 20518522-20518970,20519069-20519270 29 3.2
02_04_0167 - 20510507-20510955,20511058-20511262 29 3.2
07_03_0667 + 20517700-20517981 29 4.2
05_04_0009 + 17102778-17102883,17103083-17103573 29 4.2
04_03_0798 + 19798982-19799860 29 4.2
01_06_0237 + 27770777-27771120,27771209-27771438,27771951-277720... 29 4.2
09_04_0530 + 18365154-18365200,18365231-18365762,18365836-183659... 28 5.5
07_03_1582 + 27895744-27896985 28 5.5
02_05_0816 + 31986370-31987662 28 5.5
10_07_0077 + 12645091-12646750,12647612-12648273 28 7.3
11_03_0137 - 10617356-10617724 27 9.7
05_06_0231 - 26587900-26587980,26588291-26588356,26588452-265885... 27 9.7
04_03_0678 + 18606427-18606684 27 9.7
>03_02_0174 + 6142472-6142849
Length = 125
Score = 34.7 bits (76), Expect = 0.064
Identities = 20/46 (43%), Positives = 23/46 (50%)
Frame = -2
Query: 617 RTWSRRQRRPWSRKATPVRVPPAAALVHWQGLRPGRVGSVGGLWSG 480
R+W RR+RRPW R RV AA L + RP R G G G
Sbjct: 48 RSW-RRRRRPWRRGGARGRVEVAAVLADERRRRPWRRGGARGQGRG 92
>02_05_0205 + 26755024-26756217
Length = 397
Score = 32.3 bits (70), Expect = 0.34
Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +2
Query: 386 PITPLSLTEQTSSI*ESAVARVHRT--STSAVWLPTRDRQQIPHAQAGDPANEPGLRLAE 559
P P+ Q S+ E+ V VH S S PTR R+ +P D A E LRL+
Sbjct: 23 PRFPIYRVRQCGSVWEARV-EVHTRVPSESDYRFPTRHRRDLPETAMQDAAREAFLRLSS 81
Query: 560 P*RALLSGT 586
RA L+ T
Sbjct: 82 IHRAELAST 90
>07_01_0498 + 3734498-3734976,3736176-3736800
Length = 367
Score = 31.9 bits (69), Expect = 0.45
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -1
Query: 420 DVCSVSDNGVIGRIAQVIVDALPFLAVGGLARKV 319
D +D+GV+ IA +VD FLA GG+ R V
Sbjct: 26 DEAPAADDGVVEEIAIPVVDLAAFLASGGIGRDV 59
>06_01_0672 -
4903126-4903219,4903322-4903430,4903620-4905096,
4906200-4906538
Length = 672
Score = 31.5 bits (68), Expect = 0.59
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +3
Query: 480 SRPETANRSHTPRPETLPMNQGCGWRNPDG--RCFPGPRATLTARPSSRVP 626
SRP T R+ TP P + NPD R P P T R +RVP
Sbjct: 141 SRPRTTPRTTTPSPAGAAASPRLSSSNPDARRRAPPQPEPPSTPRKENRVP 191
>02_04_0018 - 18943015-18943734
Length = 239
Score = 31.5 bits (68), Expect = 0.59
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 644 EDGDHPGNSRTWSRRQRRPWSRKATPVRVPPAAALVHWQG 525
++G GN + +RRPW R A +R PA HW G
Sbjct: 29 QEGGGGGNEARYLGVRRRPWGRYAAEIR-DPATKERHWLG 67
>11_03_0127 - 10408628-10409106,10409188-10409821
Length = 370
Score = 30.7 bits (66), Expect = 1.0
Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = +2
Query: 386 PITPLSLTEQTSSI*ESAVARVHRT--STSAVWLPTRDRQQIPHAQAGDPANEPGLRLAE 559
P P+ Q S+ E+ V VH S S PTR R +P D A E LRL+
Sbjct: 23 PRFPIYRVRQCGSVWEARV-EVHTRVPSESDYRFPTRHRHDLPETAMQDAAREAFLRLSS 81
Query: 560 P*RALLSGT 586
RA L T
Sbjct: 82 IHRAELVST 90
>02_03_0276 - 17209623-17209654,17209806-17210244
Length = 156
Score = 30.7 bits (66), Expect = 1.0
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +2
Query: 386 PITPLSLTEQTSSI*ESAVARVHRTSTSAV--WLPTRDRQQIPHAQAGDPANEPGLRLAE 559
P P+ Q S+ E+ V VH S + PTR R+ +P D A E LRL+
Sbjct: 23 PRFPIYRVRQCGSVWEARV-EVHTRVPSELDYSFPTRHRRDLPEIAMQDAAREAFLRLSS 81
Query: 560 P*RALLSGT 586
RA L+ T
Sbjct: 82 IHRAELAST 90
>04_04_0673 -
27168305-27168874,27168977-27169099,27169180-27169440,
27169723-27169970,27170403-27170483,27171530-27171902
Length = 551
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -1
Query: 549 RSPGSLAGSPAWACGICWRSLVGSQTADVDVR 454
R PGS+AGSP A WR +GS+ A +D R
Sbjct: 31 RRPGSMAGSPGGALD-GWRWRLGSKAATMDGR 61
>08_02_1398 +
26760069-26760267,26760349-26760635,26762394-26762591,
26762819-26762845
Length = 236
Score = 29.9 bits (64), Expect = 1.8
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 193 IWSRSLIRSSHQRXPDAIAAGTQPSVAD--RAPSTLVPGVSTNDDLSCQTSDGQEGEC 360
I+ RS S R PD T P+VA+ R+PS P S++ SC TS + EC
Sbjct: 176 IFQRSSSGSRSPRRPDNDVRRTMPAVAELGRSPS---PS-SSSSQSSCVTSSSDQEEC 229
>02_04_0168 - 20518522-20518970,20519069-20519270
Length = 216
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -2
Query: 629 PGNSRTWSRRQRRPWSRKATPVRVPPAAALVHWQG 525
P +R + +RRPW + A +R P AA V W G
Sbjct: 87 PATARRYRGVRRRPWGKWAAEIRDPRKAARV-WLG 120
>02_04_0167 - 20510507-20510955,20511058-20511262
Length = 217
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -2
Query: 629 PGNSRTWSRRQRRPWSRKATPVRVPPAAALVHWQG 525
P +R + +RRPW + A +R P AA V W G
Sbjct: 90 PATARRYRGVRRRPWGKWAAEIRDPRKAARV-WLG 123
>07_03_0667 + 20517700-20517981
Length = 93
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -2
Query: 605 RRQRRPWSRKATPVRVPPAAALVHWQGLRPGRVGSVGG 492
R +R W R A P +PP+ + G PG GG
Sbjct: 53 RNGKRRWERGARPRALPPSLGRMRTGGSGPGGSAGTGG 90
>05_04_0009 + 17102778-17102883,17103083-17103573
Length = 198
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -2
Query: 629 PGNSRTWSRRQRRPWSRKATPVRVPPAAALVHWQG 525
PG + +RRPW R A +R P A V W G
Sbjct: 48 PGRKTAYRGIRRRPWGRWAAEIRDPRKGARV-WLG 81
>04_03_0798 + 19798982-19799860
Length = 292
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -2
Query: 626 GNSRT-WSRRQRRPWSRKATPVRVPPAAALVHWQG 525
GN++T + +RRPW R A +R PA HW G
Sbjct: 46 GNNQTRYLGVRRRPWGRYAAEIR-DPATKERHWLG 79
>01_06_0237 +
27770777-27771120,27771209-27771438,27771951-27772092,
27772266-27772281
Length = 243
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Frame = -2
Query: 578 KATPVRVPPAAA--LVHWQGLRPGRVGSVGGLWSGARQQTSMYDEHGPLPTLISMTFVP 408
KA P PPAA +V W +R R ++ S + + E GPL +SM P
Sbjct: 104 KAAPAAAPPAAKAQVVGWPPVRNYRKNTLAASASKGKGEDKGTAEGGPLYVKVSMDGAP 162
>09_04_0530 +
18365154-18365200,18365231-18365762,18365836-18365933,
18366026-18366271,18366615-18366729,18366844-18367057,
18367211-18367824
Length = 621
Score = 28.3 bits (60), Expect = 5.5
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = -1
Query: 540 GSLAGSPAWACGICWRSLVGSQTADVDVR*TRATADSYIDDVCSVSDNGVIGRIAQVIVD 361
G G+ A +CWR + GS+ D D+ A D+ I D V + G A + D
Sbjct: 75 GGAPGAHVAAYKVCWRPVNGSECFDADI---IAAFDAAIHDGVDVLSVSLGGAPAGYLRD 131
Query: 360 ALPFLAVGGLARKVIVRRDARHQG 289
+ + + R V V A + G
Sbjct: 132 GVAIGSFHAVRRGVTVVCSAGNSG 155
>07_03_1582 + 27895744-27896985
Length = 413
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -1
Query: 570 ARQGSASRSPGSLAGSPAWACGICWRSLVGSQTADVDVR*TRATADSYIDDVCS 409
AR G + +AG P + WR+L+G DV+ TA S ++ CS
Sbjct: 192 ARSGHLQEAHKIIAGMPMKPDAVVWRALLGGCRLHKDVK-MAETAISEMEATCS 244
>02_05_0816 + 31986370-31987662
Length = 430
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -2
Query: 629 PGNSRTWSRRQRRPWSRKATPVRVPPAAALVHWQGLRPGRV 507
P NS SRRQRRP ++ VR+ P + LR G+V
Sbjct: 97 PANSFV-SRRQRRPRGLDSSVVRMFPTMKYAEAKALRVGKV 136
>10_07_0077 + 12645091-12646750,12647612-12648273
Length = 773
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 495 ANRSHTPRPETLPMNQGCGWRNPDGRCFPG 584
A S +PRP LP+ G G N C PG
Sbjct: 369 AGPSPSPRPAMLPLVYGGGGDNASRLCLPG 398
>11_03_0137 - 10617356-10617724
Length = 122
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -2
Query: 629 PGNSRTWSRRQ-RRPWSRKATPVRVPPAAALVHWQGLRPGRVG 504
PG TW+RR+ SR+AT R+P +V L P R G
Sbjct: 10 PGMVVTWARRRPSTAASREATAARLPLLLVVVLVMCLAPSRQG 52
>05_06_0231 -
26587900-26587980,26588291-26588356,26588452-26588597,
26589182-26589374,26589465-26589515,26590165-26590311,
26590365-26590463,26590557-26590760,26590839-26590887,
26590979-26591074,26591367-26591457,26591753-26591823,
26592170-26592222,26592740-26592828,26593322-26593517,
26593975-26594088,26594217-26594291
Length = 606
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -3
Query: 205 IDSRSPVSMFCAHADARKPMNRSLYIFGYYSQNITLTISNSQCSS 71
+ R+ V + C+H D RKP R + I +S TL I + CSS
Sbjct: 380 VHDRAQVFVSCSHGDVRKP--RYVGIVERWSSK-TLQIPSLSCSS 421
>04_03_0678 + 18606427-18606684
Length = 85
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2
Query: 641 DGDHPGNSRTWSRRQRR 591
DGD G+ TW RR+RR
Sbjct: 36 DGDDDGDGATWRRRRRR 52
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,280,803
Number of Sequences: 37544
Number of extensions: 424130
Number of successful extensions: 1530
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1530
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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