Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0526.Seq
         (645 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    25   0.63 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    25   0.63 
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    23   2.5  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    23   2.5  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   5.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   5.8  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   7.7  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 329 ARPPTAKKGSASTITCAMRPITPLSLT 409
           +R  T KKG  +T+ C +   TP+++T
Sbjct: 814 SRLVTVKKGDTATLHCEVHGDTPVTVT 840


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 329 ARPPTAKKGSASTITCAMRPITPLSLT 409
           +R  T KKG  +T+ C +   TP+++T
Sbjct: 810 SRLVTVKKGDTATLHCEVHGDTPVTVT 836


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 484 REPDSRRRCTMNTGHC 437
           R+PD   +C    GHC
Sbjct: 28  RQPDGMNQCQAVNGHC 43


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 484 REPDSRRRCTMNTGHC 437
           R+PD   +C    GHC
Sbjct: 28  RQPDGMNQCQAVNGHC 43


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 537 NQGCGWRNP 563
           N  CGW+NP
Sbjct: 150 NCNCGWKNP 158


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
 Frame = +2

Query: 338 PTAKKGSASTIT---CAMRPITPLSLTEQTSSI*ESAVARVHRTS 463
           P A  GSAS +T       P+  +S TE T S   +++   H  +
Sbjct: 470 PAASWGSASDVTLDEAVKSPLGSVSSTESTCSGEVASLTEYHHVA 514


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 514 GVWDLLAVSGREPDSRRRC 458
           G WDLL V G+  +    C
Sbjct: 195 GEWDLLGVPGKRNEIYYNC 213


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,549
Number of Sequences: 438
Number of extensions: 3622
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)