Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0526.Seq
         (645 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g09000.1 68416.m01053 proline-rich family protein                   32   0.37 
At4g19830.1 68417.m02907 immunophilin / FKBP-type peptidyl-proly...    30   1.5  
At1g72410.1 68414.m08374 COP1-interacting protein-related simila...    30   1.5  
At1g53040.2 68414.m06006 expressed protein contains Pfam profile...    29   2.6  
At1g53040.1 68414.m06005 expressed protein contains Pfam profile...    29   2.6  
At5g63770.1 68418.m08004 diacylglycerol kinase, putative similar...    29   3.5  
At4g00820.1 68417.m00113 calmodulin-binding protein-related cont...    29   3.5  
At5g29070.1 68418.m03617 expressed protein                             28   4.6  
At5g65090.1 68418.m08187 endonuclease/exonuclease/phosphatase fa...    28   6.1  
At1g17540.1 68414.m02157 protein kinase-related similar to serin...    28   6.1  
At5g19340.1 68418.m02305 expressed protein                             27   8.1  

>At3g09000.1 68416.m01053 proline-rich family protein
          Length = 541

 Score = 31.9 bits (69), Expect = 0.37
 Identities = 22/74 (29%), Positives = 34/74 (45%)
 Frame = +2

Query: 248 QPARSLVSLIGLHRPWCLASLRTMTFRARPPTAKKGSASTITCAMRPITPLSLTEQTSSI 427
           +P  S  S+ GL RP    S R+ +   RP T  + S +  T   RP+T  +   ++S+ 
Sbjct: 133 KPQTSSSSVAGLRRPSSSGSSRSTS---RPATPTRRSTTPTTSTSRPVTTRASNSRSSTP 189

Query: 428 *ESAVARVHRTSTS 469
              A     R +TS
Sbjct: 190 TSRATLTAARATTS 203


>At4g19830.1 68417.m02907 immunophilin / FKBP-type peptidyl-prolyl
           cis-trans isomerase family protein similar to 70 kDa
           peptidylprolyl isomerase (Peptidylprolyl cis-trans
           isomerase) (PPiase) (Rotamase) (SP:Q43207) [Triticum
           aestivum]; FKBP-type peptidyl-prolyl cis-trans
           isomerase,Synechocystis sp., PIR2:S75144; contains Pfam
           PF00254: peptidyl-prolyl cis-trans isomerase, FKBP-type
          Length = 229

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +2

Query: 305 SLRTMTFRARPPTAKKGSASTITCAMRPITPLSLTEQTSSI 427
           SLR    R+  P++   S+ST+  A R    LS+   TSS+
Sbjct: 26  SLRIFASRSSAPSSSSSSSSTVAAASRRSISLSIIAVTSSV 66


>At1g72410.1 68414.m08374 COP1-interacting protein-related similar to
            COP1-Interacting ProteinI 7 (CIP7) [Arabidopsis thaliana]
            GI:3327870
          Length = 1163

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -2

Query: 635  DHP-GNSRTWSRRQRRPWSRKATPVRVPPAAALVHWQ 528
            D P G+  +WS R R+ W    TPV V  A  +  +Q
Sbjct: 1008 DSPTGSPASWSSRMRKKWGTAQTPVTVAAANNMSQYQ 1044


>At1g53040.2 68414.m06006 expressed protein contains Pfam profile:
           PF04765 protein of unknown function (DUF616)
          Length = 540

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = +3

Query: 453 IVHRRLLSGSRPETANRSHTPRPETLPMNQGCGWRNPDGRCFPGPR 590
           + HR +L   +P  A+    P P  LP  +  G R   G+  PG R
Sbjct: 480 VYHRDVLLTMKPPRASSRVLPEPLVLPRGRLAGGRATPGKKTPGQR 525


>At1g53040.1 68414.m06005 expressed protein contains Pfam profile:
           PF04765 protein of unknown function (DUF616)
          Length = 540

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = +3

Query: 453 IVHRRLLSGSRPETANRSHTPRPETLPMNQGCGWRNPDGRCFPGPR 590
           + HR +L   +P  A+    P P  LP  +  G R   G+  PG R
Sbjct: 480 VYHRDVLLTMKPPRASSRVLPEPLVLPRGRLAGGRATPGKKTPGQR 525


>At5g63770.1 68418.m08004 diacylglycerol kinase, putative similar to
           diacylglycerol kinase, theta (diglyceride kinase, DGK-
           theta, DAG kinase theta). [Homo sapiens]
           SWISS-PROT:P52824
          Length = 712

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +1

Query: 193 IWSRSLIRSSHQRXPDAIAAGTQPSVADRAPSTLVPGVSTNDDLS 327
           +W R  +  SH +  D    G QPS       +LVPG + ++  S
Sbjct: 62  VWKRLRVPLSHHQWTDDYGYGQQPSTCCVCLYSLVPGQNVSNKAS 106


>At4g00820.1 68417.m00113 calmodulin-binding protein-related
           contains Pfam profile PF00612: IQ calmodulin-binding
           motif
          Length = 534

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = -2

Query: 602 RQRRPWSRKATPVRVPPAAALVHWQGLRPGRVGSVGGLWSGARQQTSMY 456
           ++R   +RK     VPP    +  Q LR     S+GG   GA +Q S Y
Sbjct: 459 KERISSARKRLSFPVPPLPQQMDGQSLRSPSFKSIGGSQLGALEQQSNY 507


>At5g29070.1 68418.m03617 expressed protein 
          Length = 307

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 16/43 (37%), Positives = 17/43 (39%)
 Frame = -2

Query: 620 SRTWSRRQRRPWSRKATPVRVPPAAALVHWQGLRPGRVGSVGG 492
           S TWS  Q  P S K  P RV   A   H  G+     G   G
Sbjct: 151 SMTWSMVQHTPISAKLRPARVAHTAYCGHTAGVPRAYYGHTAG 193


>At5g65090.1 68418.m08187 endonuclease/exonuclease/phosphatase
           family protein similar to inositol polyphosphate
           5-phosphatase I (GI:10444261) and II (GI:10444263)
           [Arabidopsis thaliana];  contains Pfam profile PF03372:
           Endonuclease/Exonuclease/phosphatase family
          Length = 529

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
 Frame = -3

Query: 211 LMIDSRSPVSMFCAHADA--RKPMNRSLYIFGYYSQNITLTISNSQCSS*SNR 59
           L+++   P + + A       KP   S+Y    YS + T T S+S C S  +R
Sbjct: 122 LVVEDNEPAAKWLALISQALNKPKQESVYSNAAYSASRTTTCSSSSCGSEESR 174


>At1g17540.1 68414.m02157 protein kinase-related similar to
           serine/threonine protein kinase Fen [Lycopersicon
           esculentum] GI:1809259
          Length = 733

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
 Frame = +3

Query: 447 VFIVHR-RLL---SGSRPETANRSHTPR-PET--LPMNQGCGWRNPDGRCFPGPRATLTA 605
           VFIV + +LL   S SRP+T    HTP+ P+T   P +     ++P     PGP ++ ++
Sbjct: 143 VFIVSKGKLLTSRSASRPQTPQGPHTPQGPQTPQAPQHPPHPSKHPSMMSDPGPTSSTSS 202

Query: 606 RPSSRVP 626
                 P
Sbjct: 203 ESGRSSP 209


>At5g19340.1 68418.m02305 expressed protein
          Length = 263

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +1

Query: 265 SVADRAPSTLVPGVSTNDDLSCQTSDGQEGECVN 366
           ++A+  PST  P +S + DLS   SDG +  C+N
Sbjct: 8   TMAEAEPSTTGPRISFSADLSSSDSDG-DFICIN 40


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,335,482
Number of Sequences: 28952
Number of extensions: 290904
Number of successful extensions: 901
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1334473344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)