Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0525.Seq
         (748 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...   192   4e-51
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...   192   4e-51
EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor 1-a...   190   1e-50
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...   187   8e-50
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    36   4e-04
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    25   0.57 
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    24   1.3  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   3.0  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   3.0  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   4.0  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   7.0  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   9.3  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    21   9.3  

>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
           1-alpha protein.
          Length = 274

 Score =  192 bits (467), Expect = 4e-51
 Identities = 97/158 (61%), Positives = 109/158 (68%)
 Frame = +1

Query: 256 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 435
           IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ
Sbjct: 16  IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 75

Query: 436 TREHALLAFTLGVKQLIVGVNKMDSLNHHTVSPDLRKSRRKYPHTSRRLATTQLLSLSCP 615
           TREHALLAFTLGVKQLIVGVNKMDS           + +++     +++          P
Sbjct: 76  TREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVP 135

Query: 616 FLDGTETTCWSLQPKCLGSRGWAVERKEGKADGNASLK 729
                      +  K    +GW VERKEGK +G   ++
Sbjct: 136 ISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIE 173



 Score =  132 bits (318), Expect = 4e-33
 Identities = 64/79 (81%), Positives = 66/79 (83%)
 Frame = +3

Query: 510 TEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGMGSG 689
           TEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWFKG    
Sbjct: 101 TEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVE 160

Query: 690 T*GRQS*RKCLIEALDAIL 746
               +   KCLIEALDAIL
Sbjct: 161 RKEGKVEGKCLIEALDAIL 179



 Score = 27.5 bits (58), Expect = 0.14
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = +3

Query: 213 WVLDKLKAERE 245
           WVLDKLKAERE
Sbjct: 1   WVLDKLKAERE 11


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score =  192 bits (467), Expect = 4e-51
 Identities = 97/158 (61%), Positives = 109/158 (68%)
 Frame = +1

Query: 256 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 435
           IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ
Sbjct: 73  IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 132

Query: 436 TREHALLAFTLGVKQLIVGVNKMDSLNHHTVSPDLRKSRRKYPHTSRRLATTQLLSLSCP 615
           TREHALLAFTLGVKQLIVGVNKMDS           + +++     +++          P
Sbjct: 133 TREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVP 192

Query: 616 FLDGTETTCWSLQPKCLGSRGWAVERKEGKADGNASLK 729
                      +  K    +GW VERKEGK +G   ++
Sbjct: 193 ISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIE 230



 Score =  145 bits (352), Expect = 3e-37
 Identities = 67/68 (98%), Positives = 67/68 (98%)
 Frame = +3

Query: 42  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 221
           MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1   MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60

Query: 222 DKLKAERE 245
           DKLKAERE
Sbjct: 61  DKLKAERE 68



 Score =  132 bits (318), Expect = 4e-33
 Identities = 64/79 (81%), Positives = 66/79 (83%)
 Frame = +3

Query: 510 TEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGMGSG 689
           TEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWFKG    
Sbjct: 158 TEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVE 217

Query: 690 T*GRQS*RKCLIEALDAIL 746
               +   KCLIEALDAIL
Sbjct: 218 RKEGKVEGKCLIEALDAIL 236


>EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor
           1-alpha protein.
          Length = 172

 Score =  190 bits (463), Expect = 1e-50
 Identities = 96/157 (61%), Positives = 108/157 (68%)
 Frame = +1

Query: 259 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 438
           DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1   DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60

Query: 439 REHALLAFTLGVKQLIVGVNKMDSLNHHTVSPDLRKSRRKYPHTSRRLATTQLLSLSCPF 618
           REHALLAFTLGVKQLIVGVNKMDS           + +++     +++          P 
Sbjct: 61  REHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPI 120

Query: 619 LDGTETTCWSLQPKCLGSRGWAVERKEGKADGNASLK 729
                     +  K    +GW VERKEGK +G   ++
Sbjct: 121 SGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIE 157



 Score =  132 bits (318), Expect = 4e-33
 Identities = 64/79 (81%), Positives = 66/79 (83%)
 Frame = +3

Query: 510 TEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGMGSG 689
           TEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWFKG    
Sbjct: 85  TEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVE 144

Query: 690 T*GRQS*RKCLIEALDAIL 746
               +   KCLIEALDAIL
Sbjct: 145 RKEGKVEGKCLIEALDAIL 163


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score =  187 bits (456), Expect = 8e-50
 Identities = 95/158 (60%), Positives = 108/158 (68%)
 Frame = +1

Query: 256 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 435
           IDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG GEFEAGISKNGQ
Sbjct: 73  IDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQ 132

Query: 436 TREHALLAFTLGVKQLIVGVNKMDSLNHHTVSPDLRKSRRKYPHTSRRLATTQLLSLSCP 615
           TREHALLAFTLGVKQLIVGVNKMD  +         + +++     +++          P
Sbjct: 133 TREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKKIGYNTASVAFVP 192

Query: 616 FLDGTETTCWSLQPKCLGSRGWAVERKEGKADGNASLK 729
                        PK    +GW VERK+G ADG   ++
Sbjct: 193 ISGWHGDNMLEPSPKTPWYKGWKVERKDGNADGKTLIE 230



 Score =  145 bits (352), Expect = 3e-37
 Identities = 67/68 (98%), Positives = 67/68 (98%)
 Frame = +3

Query: 42  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 221
           MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1   MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60

Query: 222 DKLKAERE 245
           DKLKAERE
Sbjct: 61  DKLKAERE 68



 Score =  122 bits (295), Expect = 3e-30
 Identities = 59/79 (74%), Positives = 63/79 (79%)
 Frame = +3

Query: 510 TEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGMGSG 689
           T+PPYSE RFEEIKKEVSSYIKKIGYN A+VAFVPISGWHGDNMLEPS K PW+KG    
Sbjct: 158 TDPPYSEARFEEIKKEVSSYIKKIGYNTASVAFVPISGWHGDNMLEPSPKTPWYKGWKVE 217

Query: 690 T*GRQS*RKCLIEALDAIL 746
                +  K LIEALDAIL
Sbjct: 218 RKDGNADGKTLIEALDAIL 236


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 35.9 bits (79), Expect = 4e-04
 Identities = 27/73 (36%), Positives = 34/73 (46%)
 Frame = +1

Query: 298 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 477
           VT +D PGH  FI     G    D  VL+VAA  G  E       QT +   +A    V 
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV- 246

Query: 478 QLIVGVNKMDSLN 516
            +IV +NK+D  N
Sbjct: 247 PIIVAINKIDKPN 259



 Score = 25.4 bits (53), Expect = 0.57
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 54  KTHINIVVIGHVDSGKST 107
           K H  + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 25.4 bits (53), Expect = 0.57
 Identities = 7/30 (23%), Positives = 16/30 (53%)
 Frame = +2

Query: 617 FWMARRQHVGAFNQNALVQGDGQWNVRKAK 706
           +W+ +R+H  +  +   +Q   QW+ R  +
Sbjct: 593 YWLEKREHRSSSTKGITIQEPPQWHTRSTE 622


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = +3

Query: 63  INIVVIGHVDSGKST 107
           INI  IGHV  GKST
Sbjct: 43  INIGTIGHVAHGKST 57


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 55  FSLPIFG*SRITNCV*Y 5
           FSLPIFG   I +C+ Y
Sbjct: 57  FSLPIFGTRWIFSCIGY 73


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +1

Query: 283 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 384
           T KYY    D P +  FIKN+   ++ +D   LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +1

Query: 283 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 384
           T KYY    D P +  FIKN+   ++ +D   L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +1

Query: 643 WSLQPKCLGSRGWAVERKEGKAD 711
           + L   CLG   W V R +G  D
Sbjct: 442 YMLMEACLGGELWTVLRDKGHFD 464


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -2

Query: 297 IVLASFELPESNIDLIPXHAQPLVCPIPKHI*RILY 190
           IV+  FE+ +S  D     A      IP ++ R+L+
Sbjct: 54  IVIGGFEIEKSEDDSFNNQADKSEKRIPLYVCRVLH 89


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 659 FG*RLQHVVSVPSRNGHESDSSWV 588
           FG  L H++ V  +N   + + WV
Sbjct: 35  FGLSLHHIIDVDEKNQILTTNCWV 58


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,341
Number of Sequences: 438
Number of extensions: 4778
Number of successful extensions: 35
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)