Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0524.Seq
(598 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 268 3e-72
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 268 3e-72
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 225 1e-59
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 172 2e-52
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 140 9e-34
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 137 5e-33
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 137 5e-33
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 85 4e-17
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 68 4e-12
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 68 4e-12
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 68 4e-12
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 64 5e-11
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 64 5e-11
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 35 0.038
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 35 0.038
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 34 0.067
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 33 0.15
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 32 0.27
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 31 0.47
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 0.47
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 31 0.62
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 29 1.9
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z35603-2|CAA84674.1| 418|Caenorhabditis elegans Hypothetical pr... 27 7.7
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 268 bits (656), Expect = 3e-72
Identities = 133/185 (71%), Positives = 141/185 (76%)
Frame = +3
Query: 42 MGKEKTHINIVVIXXXXXXXXXXXXHLIYKCGGIDKRTIEKFEKEAQEMGKXSFKXXLGI 221
MGKEK HINIVVI HLIYKCGGIDKRTIEKFEKEAQEMGK SFK +
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 222 GQTKG*AXREYTIDIALWKFETSXYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGT 401
+ K R TIDIALWKFET+ YY+TIIDAPGH DFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 402 GEFEAGISKNGQTREHALLAFTLGVKTAHRRSKQNGSTEPPYSEPRFEEIKKEVSSYIKK 581
GEFEAGISKNGQTREHALLA TLGVK + STEPP+SE RF EI EVS +IKK
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK 180
Query: 582 IGYNP 596
IGYNP
Sbjct: 181 IGYNP 185
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 268 bits (656), Expect = 3e-72
Identities = 133/185 (71%), Positives = 141/185 (76%)
Frame = +3
Query: 42 MGKEKTHINIVVIXXXXXXXXXXXXHLIYKCGGIDKRTIEKFEKEAQEMGKXSFKXXLGI 221
MGKEK HINIVVI HLIYKCGGIDKRTIEKFEKEAQEMGK SFK +
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 222 GQTKG*AXREYTIDIALWKFETSXYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGT 401
+ K R TIDIALWKFET+ YY+TIIDAPGH DFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 402 GEFEAGISKNGQTREHALLAFTLGVKTAHRRSKQNGSTEPPYSEPRFEEIKKEVSSYIKK 581
GEFEAGISKNGQTREHALLA TLGVK + STEPP+SE RF EI EVS +IKK
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK 180
Query: 582 IGYNP 596
IGYNP
Sbjct: 181 IGYNP 185
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 225 bits (551), Expect = 1e-59
Identities = 111/146 (76%), Positives = 116/146 (79%)
Frame = +3
Query: 42 MGKEKTHINIVVIXXXXXXXXXXXXHLIYKCGGIDKRTIEKFEKEAQEMGKXSFKXXLGI 221
MGKEK HINIVVI HLIYKCGGIDKRTIEKFEKEAQEMGK SFK +
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 222 GQTKG*AXREYTIDIALWKFETSXYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGT 401
+ K R TIDIALWKFET+ YY+TIIDAPGH DFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 402 GEFEAGISKNGQTREHALLAFTLGVK 479
GEFEAGISKNGQTREHALLA TLGVK
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVK 146
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 172 bits (418), Expect(2) = 2e-52
Identities = 84/117 (71%), Positives = 89/117 (76%)
Frame = +3
Query: 42 MGKEKTHINIVVIXXXXXXXXXXXXHLIYKCGGIDKRTIEKFEKEAQEMGKXSFKXXLGI 221
MGKEK HINIVVI HLIYKCGGIDKRTIEKFEKEAQEMGK SFK +
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 222 GQTKG*AXREYTIDIALWKFETSXYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVA 392
+ K R TIDIALWKFET+ YY+TIIDAPGH DFIKNMITGTSQADCAVL+VA
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 51.2 bits (117), Expect(2) = 2e-52
Identities = 22/29 (75%), Positives = 24/29 (82%)
Frame = +3
Query: 510 STEPPYSEPRFEEIKKEVSSYIKKIGYNP 596
STEPP+SE RF EI EVS +IKKIGYNP
Sbjct: 123 STEPPFSEARFTEITNEVSGFIKKIGYNP 151
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 140 bits (338), Expect = 9e-34
Identities = 71/186 (38%), Positives = 109/186 (58%), Gaps = 2/186 (1%)
Frame = +3
Query: 45 GKEKTHINIVVIXXXXXXXXXXXXHLIYKCGGIDKRTIEKFEKEAQEMGKXSFKXXLGIG 224
G K HIN+V + L++ G +DKRT+EK+E+EA+E G+ S+ +
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 225 QTKG*AXREYTIDIALWKFETSXYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTG 404
+ T+++ FET + TI+DAPGH F+ NMI G +QAD AVL+++A G
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRG 223
Query: 405 EFEAGISKNGQTREHALLAFTLGVKTAHRRSKQNGSTEP--PYSEPRFEEIKKEVSSYIK 578
EFE G + GQTREH++L T GVK H N +P + E RF+EI+ +++ +++
Sbjct: 224 EFETGFDRGGQTREHSMLVKTAGVK--HLVILVNKMDDPTVKWEEERFKEIEGKLTPFLR 281
Query: 579 KIGYNP 596
K+G+NP
Sbjct: 282 KLGFNP 287
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 137 bits (332), Expect = 5e-33
Identities = 73/177 (41%), Positives = 103/177 (58%)
Frame = +3
Query: 51 EKTHINIVVIXXXXXXXXXXXXHLIYKCGGIDKRTIEKFEKEAQEMGKXSFKXXLGIGQT 230
+K IN++V+ HL++ +D RTI+KF+ EA GK SF + +T
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 231 KG*AXREYTIDIALWKFETSXYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEF 410
+ R T+DI FETS + ++DAPGH DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 286
Query: 411 EAGISKNGQTREHALLAFTLGVKTAHRRSKQNGSTEPPYSEPRFEEIKKEVSSYIKK 581
E G GQT+EHALL +LGV + + + +S+ RF+EIK +S ++ +
Sbjct: 287 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTR 341
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 137 bits (332), Expect = 5e-33
Identities = 73/177 (41%), Positives = 103/177 (58%)
Frame = +3
Query: 51 EKTHINIVVIXXXXXXXXXXXXHLIYKCGGIDKRTIEKFEKEAQEMGKXSFKXXLGIGQT 230
+K IN++V+ HL++ +D RTI+KF+ EA GK SF + +T
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 231 KG*AXREYTIDIALWKFETSXYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEF 410
+ R T+DI FETS + ++DAPGH DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 304
Query: 411 EAGISKNGQTREHALLAFTLGVKTAHRRSKQNGSTEPPYSEPRFEEIKKEVSSYIKK 581
E G GQT+EHALL +LGV + + + +S+ RF+EIK +S ++ +
Sbjct: 305 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTR 359
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 85.0 bits (201), Expect = 4e-17
Identities = 41/55 (74%), Positives = 41/55 (74%)
Frame = +3
Query: 42 MGKEKTHINIVVIXXXXXXXXXXXXHLIYKCGGIDKRTIEKFEKEAQEMGKXSFK 206
MGKEK HINIVVI HLIYKCGGIDKRTIEKFEKEAQEMGK SFK
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFK 55
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 68.1 bits (159), Expect = 4e-12
Identities = 43/115 (37%), Positives = 62/115 (53%)
Frame = +3
Query: 246 REYTIDIALWKFETSXYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 425
R TI+ ++ET+ + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 96 RGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP---- 151
Query: 426 KNGQTREHALLAFTLGVKTAHRRSKQNGSTEPPYSEPRFEEIKKEVSSYIKKIGY 590
QTREH LLA +GV + N E P +E R E ++ ++ + + GY
Sbjct: 152 ---QTREHLLLARQVGVPLDNIVVFMNKVDEVPDAETR-ELVEMDIREQLNEFGY 202
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 68.1 bits (159), Expect = 4e-12
Identities = 43/115 (37%), Positives = 62/115 (53%)
Frame = +3
Query: 246 REYTIDIALWKFETSXYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 425
R TI+ ++ET+ + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 97 RGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP---- 152
Query: 426 KNGQTREHALLAFTLGVKTAHRRSKQNGSTEPPYSEPRFEEIKKEVSSYIKKIGY 590
QTREH LLA +GV + N E P +E R E ++ ++ + + GY
Sbjct: 153 ---QTREHLLLARQVGVPLDNIVVFMNKVDEVPDAETR-ELVEMDIREQLNEFGY 203
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 68.1 bits (159), Expect = 4e-12
Identities = 43/115 (37%), Positives = 62/115 (53%)
Frame = +3
Query: 246 REYTIDIALWKFETSXYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 425
R TI+ ++ET+ + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 97 RGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP---- 152
Query: 426 KNGQTREHALLAFTLGVKTAHRRSKQNGSTEPPYSEPRFEEIKKEVSSYIKKIGY 590
QTREH LLA +GV + N E P +E R E ++ ++ + + GY
Sbjct: 153 ---QTREHLLLARQVGVPLDNIVVFMNKVDEVPDAETR-ELVEMDIREQLNEFGY 203
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 64.5 bits (150), Expect = 5e-11
Identities = 37/78 (47%), Positives = 47/78 (60%)
Frame = +3
Query: 246 REYTIDIALWKFETSXYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 425
R TI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 92 RGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME---- 147
Query: 426 KNGQTREHALLAFTLGVK 479
QT+EH +LA +GVK
Sbjct: 148 ---QTKEHLILAKQVGVK 162
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 64.5 bits (150), Expect = 5e-11
Identities = 37/78 (47%), Positives = 47/78 (60%)
Frame = +3
Query: 246 REYTIDIALWKFETSXYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 425
R TI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 92 RGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME---- 147
Query: 426 KNGQTREHALLAFTLGVK 479
QT+EH +LA +GVK
Sbjct: 148 ---QTKEHLILAKQVGVK 162
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 35.1 bits (77), Expect = 0.038
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = +3
Query: 201 FKXXLGIGQTKG*AXREYTIDIALWKFETSXYYVTIIDAPGHXDFIKNMITGTSQADCAV 380
F L I + +G + + + I + Y + IID PGH +F M AD V
Sbjct: 170 FTDILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVV 229
Query: 381 LIVAAGTG 404
++V A G
Sbjct: 230 VMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 35.1 bits (77), Expect = 0.038
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = +3
Query: 201 FKXXLGIGQTKG*AXREYTIDIALWKFETSXYYVTIIDAPGHXDFIKNMITGTSQADCAV 380
F L I + +G + + + I + Y + IID PGH +F M AD V
Sbjct: 45 FTDILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVV 104
Query: 381 LIVAAGTG 404
++V A G
Sbjct: 105 VMVDAHEG 112
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 34.3 bits (75), Expect = 0.067
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +3
Query: 300 VTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTG 404
VT +D PGH F G AD VL+VAA G
Sbjct: 206 VTFLDTPGHAAFASMRARGAKGADIVVLVVAADDG 240
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 33.1 bits (72), Expect = 0.15
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +3
Query: 246 REYTIDIALWKFET-SXYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 422
R T+D+ + S + +ID PGH I+ ++ ++ D A++I+ + AGI
Sbjct: 55 RRNTLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGI 109
Query: 423 SKNGQTREHALLA 461
QT EH LLA
Sbjct: 110 QP--QTAEHLLLA 120
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 32.3 bits (70), Expect = 0.27
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 294 YYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTG 404
Y + +ID PGH DF + + D +L+VAA G
Sbjct: 102 YLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG 138
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 31.5 bits (68), Expect = 0.47
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 255 TIDIALWKFETSXYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTG 404
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 31.5 bits (68), Expect = 0.47
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 285 TSXYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVA 392
T +V+ +D PGH + M+ G + D A L+VA
Sbjct: 124 TCVRHVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 31.1 bits (67), Expect = 0.62
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 255 TIDIALWKFETSXYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTG 404
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 306 IIDAPGHXDFIKNMITGTSQADCAVLIV 389
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 28.3 bits (60), Expect = 4.4
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 300 VTIIDAPGHXDFIKNMITGTSQADCAVLIV 389
+ +ID+PGH DF + + +D A+L++
Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 28.3 bits (60), Expect = 4.4
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 300 VTIIDAPGHXDFIKNMITGTSQADCAVLIV 389
+ +ID+PGH DF + + +D A+L++
Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 28.3 bits (60), Expect = 4.4
Identities = 24/90 (26%), Positives = 35/90 (38%)
Frame = +3
Query: 246 REYTIDIALWKFETSXYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 425
R TI A + + IID PGH DF + D AVL++ G G G+
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG----GVQ 150
Query: 426 KNGQTREHALLAFTLGVKTAHRRSKQNGST 515
T L + + + +NG+T
Sbjct: 151 SQTFTVNRQLARYNVPFICFVNKMDRNGAT 180
>Z35603-2|CAA84674.1| 418|Caenorhabditis elegans Hypothetical
protein T02C12.2 protein.
Length = 418
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 454 CSLSPSVSKQLIVGVNKMVPLNHHTVSPDLRKSRRKYPHT 573
CS+ +++ V+ ++P N +S +LR SR P T
Sbjct: 159 CSILEKCEDDIVLIVDALMPYNRELLSSELRSSRLLKPMT 198
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,509,406
Number of Sequences: 27780
Number of extensions: 233239
Number of successful extensions: 672
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -