Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0524.Seq
(598 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 242 1e-64
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 242 1e-64
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 242 1e-64
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 242 1e-64
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 123 1e-28
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 106 1e-23
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 61 5e-10
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 57 8e-09
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 35 0.047
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 35 0.047
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 34 0.063
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 33 0.19
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 33 0.19
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 32 0.25
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 32 0.25
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 32 0.25
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 31 0.44
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 31 0.44
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 31 0.44
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 31 0.44
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 29 1.8
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 29 1.8
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 29 1.8
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 1.8
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 2.4
At5g64440.1 68418.m08095 amidase family protein low similarity t... 28 5.4
At3g08580.2 68416.m00996 ADP, ATP carrier protein 1, mitochondri... 28 5.4
At3g08580.1 68416.m00995 ADP, ATP carrier protein 1, mitochondri... 28 5.4
At1g21230.1 68414.m02653 wall-associated kinase, putative simila... 27 7.2
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 27 7.2
At5g46180.1 68418.m05680 ornithine aminotransferase, putative / ... 27 9.5
At3g20700.1 68416.m02619 F-box family protein-related contains T... 27 9.5
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 242 bits (592), Expect = 1e-64
Identities = 121/185 (65%), Positives = 136/185 (73%)
Frame = +3
Query: 42 MGKEKTHINIVVIXXXXXXXXXXXXHLIYKCGGIDKRTIEKFEKEAQEMGKXSFKXXLGI 221
MGKEK HINIVVI HLIYK GGIDKR IE+FEKEA EM K SFK +
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 222 GQTKG*AXREYTIDIALWKFETSXYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGT 401
+ K R TIDIALWKFET+ YY T+IDAPGH DFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 402 GEFEAGISKNGQTREHALLAFTLGVKTAHRRSKQNGSTEPPYSEPRFEEIKKEVSSYIKK 581
G FEAGISK+GQTREHALLAFTLGVK + +T P YS+ R++EI KEVSSY+KK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 180
Query: 582 IGYNP 596
+GYNP
Sbjct: 181 VGYNP 185
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 242 bits (592), Expect = 1e-64
Identities = 121/185 (65%), Positives = 136/185 (73%)
Frame = +3
Query: 42 MGKEKTHINIVVIXXXXXXXXXXXXHLIYKCGGIDKRTIEKFEKEAQEMGKXSFKXXLGI 221
MGKEK HINIVVI HLIYK GGIDKR IE+FEKEA EM K SFK +
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 222 GQTKG*AXREYTIDIALWKFETSXYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGT 401
+ K R TIDIALWKFET+ YY T+IDAPGH DFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 402 GEFEAGISKNGQTREHALLAFTLGVKTAHRRSKQNGSTEPPYSEPRFEEIKKEVSSYIKK 581
G FEAGISK+GQTREHALLAFTLGVK + +T P YS+ R++EI KEVSSY+KK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 180
Query: 582 IGYNP 596
+GYNP
Sbjct: 181 VGYNP 185
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 242 bits (592), Expect = 1e-64
Identities = 121/185 (65%), Positives = 136/185 (73%)
Frame = +3
Query: 42 MGKEKTHINIVVIXXXXXXXXXXXXHLIYKCGGIDKRTIEKFEKEAQEMGKXSFKXXLGI 221
MGKEK HINIVVI HLIYK GGIDKR IE+FEKEA EM K SFK +
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 222 GQTKG*AXREYTIDIALWKFETSXYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGT 401
+ K R TIDIALWKFET+ YY T+IDAPGH DFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 402 GEFEAGISKNGQTREHALLAFTLGVKTAHRRSKQNGSTEPPYSEPRFEEIKKEVSSYIKK 581
G FEAGISK+GQTREHALLAFTLGVK + +T P YS+ R++EI KEVSSY+KK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 180
Query: 582 IGYNP 596
+GYNP
Sbjct: 181 VGYNP 185
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 242 bits (592), Expect = 1e-64
Identities = 121/185 (65%), Positives = 136/185 (73%)
Frame = +3
Query: 42 MGKEKTHINIVVIXXXXXXXXXXXXHLIYKCGGIDKRTIEKFEKEAQEMGKXSFKXXLGI 221
MGKEK HINIVVI HLIYK GGIDKR IE+FEKEA EM K SFK +
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 222 GQTKG*AXREYTIDIALWKFETSXYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGT 401
+ K R TIDIALWKFET+ YY T+IDAPGH DFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 402 GEFEAGISKNGQTREHALLAFTLGVKTAHRRSKQNGSTEPPYSEPRFEEIKKEVSSYIKK 581
G FEAGISK+GQTREHALLAFTLGVK + +T P YS+ R++EI KEVSSY+KK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 180
Query: 582 IGYNP 596
+GYNP
Sbjct: 181 VGYNP 185
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 123 bits (296), Expect = 1e-28
Identities = 62/181 (34%), Positives = 100/181 (55%)
Frame = +3
Query: 51 EKTHINIVVIXXXXXXXXXXXXHLIYKCGGIDKRTIEKFEKEAQEMGKXSFKXXLGIGQT 230
+K H+N+V I +++ G +D R I+K+EKEA++ + S+ +
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157
Query: 231 KG*AXREYTIDIALWKFETSXYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEF 410
+ + T+++ FET TI+DAPGH ++ NMI+G SQAD VL+++A GEF
Sbjct: 158 EEERLKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEF 217
Query: 411 EAGISKNGQTREHALLAFTLGVKTAHRRSKQNGSTEPPYSEPRFEEIKKEVSSYIKKIGY 590
E G + GQTREH LA TLGV + +S+ R++EI++++ ++K GY
Sbjct: 218 ETGYERGGQTREHVQLAKTLGVSKLIVVVNKMDDPTVNWSKERYDEIEQKMVPFLKASGY 277
Query: 591 N 593
N
Sbjct: 278 N 278
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 106 bits (255), Expect = 1e-23
Identities = 57/175 (32%), Positives = 94/175 (53%), Gaps = 1/175 (0%)
Frame = +3
Query: 57 THINIVVIXXXXXXXXXXXXHLIYKCGGIDKRTIEKFEKEAQEMGKXSFKXXLGIGQTKG 236
+ +N+ ++ L++ G I ++ + K+EKEA+ GK SF + ++
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297
Query: 237 *AXREYTIDIALWKFETSXYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEA 416
R T+ +A+ F + ++V ++D+PGH DF+ NMI G +QAD A+L++ A G FEA
Sbjct: 298 ERERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEA 357
Query: 417 GISK-NGQTREHALLAFTLGVKTAHRRSKQNGSTEPPYSEPRFEEIKKEVSSYIK 578
G GQTREHA + GV+ N YS+ RF+ IK+ V S+++
Sbjct: 358 GFDNLKGQTREHARVLRGFGVEQV--IVAINKMDIVGYSKERFDLIKQHVGSFLQ 410
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 61.3 bits (142), Expect = 5e-10
Identities = 32/77 (41%), Positives = 45/77 (58%)
Frame = +3
Query: 246 REYTIDIALWKFETSXYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 425
R TI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+ G
Sbjct: 126 RGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP---- 181
Query: 426 KNGQTREHALLAFTLGV 476
QT+EH LLA +GV
Sbjct: 182 ---QTKEHILLAKQVGV 195
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 57.2 bits (132), Expect = 8e-09
Identities = 31/77 (40%), Positives = 44/77 (57%)
Frame = +3
Query: 246 REYTIDIALWKFETSXYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 425
R TI A ++ET+ + +D PGH D++KNMITG +Q D +L+V+ G
Sbjct: 114 RGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP---- 169
Query: 426 KNGQTREHALLAFTLGV 476
QT+EH LLA +GV
Sbjct: 170 ---QTKEHILLARQVGV 183
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 34.7 bits (76), Expect = 0.047
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +3
Query: 225 QTKG*AXREYTIDIALWKFETSXYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTG 404
Q + + + + + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 186 QERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 34.7 bits (76), Expect = 0.047
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +3
Query: 225 QTKG*AXREYTIDIALWKFETSXYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTG 404
Q + + + + + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 186 QERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 34.3 bits (75), Expect = 0.063
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 282 ETSXYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTG 404
E S Y + +ID PGH DF + S A+L+V A G
Sbjct: 131 EASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG 171
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 32.7 bits (71), Expect = 0.19
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 300 VTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTG 404
+T +D PGH F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 32.7 bits (71), Expect = 0.19
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 294 YYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTG 404
Y + +ID+PGH DF + T +D A+++V A G
Sbjct: 74 YSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 32.3 bits (70), Expect = 0.25
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 294 YYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 449
Y V IID PGH DF + D A+L++ + G I+ + Q R +
Sbjct: 133 YKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 32.3 bits (70), Expect = 0.25
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 297 YVTIIDAPGHXDFIKNMITGTSQADCAVLIVAA 395
+V+ +D PGH + M+ G + D A+LI+AA
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAA 152
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 32.3 bits (70), Expect = 0.25
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 294 YYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 449
Y V IID PGH DF + D A+L++ + G I+ + Q R +
Sbjct: 133 YKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 31.5 bits (68), Expect = 0.44
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 279 FETSXYYVTIIDAPGHXDFIKNMITGTSQADCAVLIVAAGTG 404
+E + + + +ID PGH DF + + + A+L+V A G
Sbjct: 147 YEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 188
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 31.5 bits (68), Expect = 0.44
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 297 YVTIIDAPGHXDFIKNMITGTSQADCAVLIVAA 395
+V+ +D PGH + M+ G + D A+L++AA
Sbjct: 128 HVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 31.5 bits (68), Expect = 0.44
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 297 YVTIIDAPGHXDFIKNMITGTSQADCAVLIVAA 395
+V+ +D PGH + M+ G + D A+L++AA
Sbjct: 128 HVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 31.5 bits (68), Expect = 0.44
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 297 YVTIIDAPGHXDFIKNMITGTSQADCAVLIVAA 395
+V+ +D PGH + M+ G + D A+L++AA
Sbjct: 122 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAA 154
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 306 IIDAPGHXDFIKNMITGTSQADCAVLIV 389
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 306 IIDAPGHXDFIKNMITGTSQADCAVLIV 389
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 306 IIDAPGHXDFIKNMITGTSQADCAVLIV 389
+ID PGH F G+S D A+L+V
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV 732
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 294 YYVTIIDAPGHXDFIKNMITGTSQADCAVLIV 389
Y + +ID+PGH DF + D A+++V
Sbjct: 98 YLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 300 VTIIDAPGHXDFIKNMITGTSQADCAVLIV 389
+ +ID PGH F G++ D A+L+V
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV 587
>At5g64440.1 68418.m08095 amidase family protein low similarity to
enantiomerase-selective amidase [Rhodococcus sp.]
GI:152052; contains Pfam profile PF01425: Amidase
Length = 607
Score = 27.9 bits (59), Expect = 5.4
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = +3
Query: 351 TGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKTAHRRSKQNGS 512
TG S + A IVAAG G G R + L G+KT + R+ GS
Sbjct: 278 TGGSSSGSAA-IVAAGLCSAALGTDGGGSVRIPSALCGITGLKTTYGRTDMTGS 330
>At3g08580.2 68416.m00996 ADP, ATP carrier protein 1, mitochondrial
/ ADP/ATP translocase 1 / adenine nucleotide
translocator 1 (ANT1) identical to SWISS-PROT:P31167
ADP,ATP carrier protein 1 (Adenine nucleotide
translocator 1) [Arabidopsis thaliana]
Length = 381
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 469 SVSKQLIVGVNKMVPLNHHTVSPDLRKSRRKYPHTSRRLATT 594
SVSK + VG + H + + ++P TSR LATT
Sbjct: 22 SVSKDVQVGYQRPSMYQRHATYGNYSNAAFQFPPTSRMLATT 63
>At3g08580.1 68416.m00995 ADP, ATP carrier protein 1, mitochondrial
/ ADP/ATP translocase 1 / adenine nucleotide
translocator 1 (ANT1) identical to SWISS-PROT:P31167
ADP,ATP carrier protein 1 (Adenine nucleotide
translocator 1) [Arabidopsis thaliana]
Length = 381
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 469 SVSKQLIVGVNKMVPLNHHTVSPDLRKSRRKYPHTSRRLATT 594
SVSK + VG + H + + ++P TSR LATT
Sbjct: 22 SVSKDVQVGYQRPSMYQRHATYGNYSNAAFQFPPTSRMLATT 63
>At1g21230.1 68414.m02653 wall-associated kinase, putative similar
to wall-associated kinase 1 [Arabidopsis thaliana]
GI:3549626; expressed in leaves and stems & induced by
salicylic acid or INA (PMID:10380805)
Length = 733
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/37 (48%), Positives = 20/37 (54%)
Frame = -3
Query: 515 SGTILFTPTMSCFDTEGESEQGMLTGLTVLRDTSFEF 405
SG+ L T TMSC DT E E L TVL T+ F
Sbjct: 309 SGSDLNTTTMSCIDTPKE-EPKYLGWTTVLLGTTIGF 344
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 309 IDAPGHXDFIKNMITGTSQADCAVLIVAAGTG 404
+D PGH F G D A+++VAA G
Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDG 588
>At5g46180.1 68418.m05680 ornithine aminotransferase, putative /
ornithine--oxo-acid aminotransferase, putative similar
to SP|Q92413 Ornithine aminotransferase (EC 2.6.1.13)
(Ornithine--oxo-acid aminotransferase) [Aspergillus
nidulans] {Emericella nidulans}; contains Pfam profile
PF00202: aminotransferase, class III
Length = 475
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 465 TLGVKTAHRRSKQNGSTEPPYSEPRFEEIKKEVSSY 572
T GV+ ++ Q+ S PP S R E++ E S++
Sbjct: 18 TAGVRRSYGGLPQSNSKSPPSSSQRLMELESEFSAH 53
>At3g20700.1 68416.m02619 F-box family protein-related contains
TIGRFAM TIGR01640: F-box protein interaction domain
Length = 326
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +1
Query: 391 LPVPVNSKLVSLRTVKPVSMPCSLSPSVSKQLIVGV-NKMVP 513
LP+P N VSL VK + PS ++ + V NK+ P
Sbjct: 199 LPLPFNGAYVSLSAVKEEQLAVLFQPSDKSEIEIWVTNKIEP 240
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,871,528
Number of Sequences: 28952
Number of extensions: 218254
Number of successful extensions: 643
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 634
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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