Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0523.Seq
         (648 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_02_0146 + 8779249-8780130,8780815-8780970,8781070-8781265,878...    27   9.7  
05_03_0366 - 13102147-13102281,13102560-13102739,13102791-131029...    27   9.7  

>11_02_0146 +
           8779249-8780130,8780815-8780970,8781070-8781265,
           8781574-8781599
          Length = 419

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 409 LNDDETFIS-KQLNSFQHSHEILFKNTP*LLCA*SSFLTFSIA 534
           +ND ++F S +QLN F H   +  K TP  +C   SF    +A
Sbjct: 64  INDVDSFYSVQQLNKFVHHLLLHRKRTPLYVCELDSFRNGEVA 106


>05_03_0366 -
           13102147-13102281,13102560-13102739,13102791-13102992,
           13104385-13104575
          Length = 235

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 592 LAANRRQNVPTPYKFELTFTLSRTLKNSTKH 500
           + ANRRQN+ TP    LT TL +      +H
Sbjct: 192 MVANRRQNMLTPMTQMLTSTLQQASVEGLRH 222


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,695,813
Number of Sequences: 37544
Number of extensions: 233013
Number of successful extensions: 409
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 408
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)