Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0523.Seq
(648 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 28 6.6
U37548-9|AAR25651.1| 1852|Caenorhabditis elegans Calcium channel... 27 8.7
U37548-8|AAM51534.1| 1837|Caenorhabditis elegans Calcium channel... 27 8.7
U37548-7|AAR25652.1| 1885|Caenorhabditis elegans Calcium channel... 27 8.7
U37548-6|AAR25653.1| 1844|Caenorhabditis elegans Calcium channel... 27 8.7
AY322480-1|AAP84337.1| 1844|Caenorhabditis elegans T-type voltag... 27 8.7
AY313900-1|AAP79883.1| 1852|Caenorhabditis elegans T-type calciu... 27 8.7
AY313899-1|AAP79882.1| 1885|Caenorhabditis elegans T-type calciu... 27 8.7
AY313898-1|AAP79881.1| 1837|Caenorhabditis elegans T-type calciu... 27 8.7
AF368920-1|AAK53427.1| 1837|Caenorhabditis elegans voltage-depen... 27 8.7
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical
protein H06O01.2 protein.
Length = 1461
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 409 LNDDETFISKQLNSFQHSHEILFKNTP 489
L +DE+ + K L F+ +H++L TP
Sbjct: 543 LKNDESLLYKSLTQFRFNHKLLITGTP 569
>U37548-9|AAR25651.1| 1852|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform c protein.
Length = 1852
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 115 ILKTLTYILTSVETLN*QKKSVALGYCR 32
+LK L Y T+V TL K +ALG+ R
Sbjct: 1487 VLKALNYFFTAVFTLEAAMKLIALGFKR 1514
>U37548-8|AAM51534.1| 1837|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform a protein.
Length = 1837
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 115 ILKTLTYILTSVETLN*QKKSVALGYCR 32
+LK L Y T+V TL K +ALG+ R
Sbjct: 1472 VLKALNYFFTAVFTLEAAMKLIALGFKR 1499
>U37548-7|AAR25652.1| 1885|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform d protein.
Length = 1885
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 115 ILKTLTYILTSVETLN*QKKSVALGYCR 32
+LK L Y T+V TL K +ALG+ R
Sbjct: 1520 VLKALNYFFTAVFTLEAAMKLIALGFKR 1547
>U37548-6|AAR25653.1| 1844|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform e protein.
Length = 1844
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 115 ILKTLTYILTSVETLN*QKKSVALGYCR 32
+LK L Y T+V TL K +ALG+ R
Sbjct: 1479 VLKALNYFFTAVFTLEAAMKLIALGFKR 1506
>AY322480-1|AAP84337.1| 1844|Caenorhabditis elegans T-type voltage
sensitive calciumchannel alpha1 subunit isoform D
protein.
Length = 1844
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 115 ILKTLTYILTSVETLN*QKKSVALGYCR 32
+LK L Y T+V TL K +ALG+ R
Sbjct: 1479 VLKALNYFFTAVFTLEAAMKLIALGFKR 1506
>AY313900-1|AAP79883.1| 1852|Caenorhabditis elegans T-type calcium
channel alpha1 subunitisoform C protein.
Length = 1852
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 115 ILKTLTYILTSVETLN*QKKSVALGYCR 32
+LK L Y T+V TL K +ALG+ R
Sbjct: 1487 VLKALNYFFTAVFTLEAAMKLIALGFKR 1514
>AY313899-1|AAP79882.1| 1885|Caenorhabditis elegans T-type calcium
channel alpha1 subunitisoform B protein.
Length = 1885
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 115 ILKTLTYILTSVETLN*QKKSVALGYCR 32
+LK L Y T+V TL K +ALG+ R
Sbjct: 1520 VLKALNYFFTAVFTLEAAMKLIALGFKR 1547
>AY313898-1|AAP79881.1| 1837|Caenorhabditis elegans T-type calcium
channel alpha1 subunitisoform A protein.
Length = 1837
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 115 ILKTLTYILTSVETLN*QKKSVALGYCR 32
+LK L Y T+V TL K +ALG+ R
Sbjct: 1472 VLKALNYFFTAVFTLEAAMKLIALGFKR 1499
>AF368920-1|AAK53427.1| 1837|Caenorhabditis elegans voltage-dependent
calcium channelalpha13 subunit protein.
Length = 1837
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 115 ILKTLTYILTSVETLN*QKKSVALGYCR 32
+LK L Y T+V TL K +ALG+ R
Sbjct: 1472 VLKALNYFFTAVFTLEAAMKLIALGFKR 1499
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,531,572
Number of Sequences: 27780
Number of extensions: 267810
Number of successful extensions: 504
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 504
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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