Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0521.Seq
(548 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical... 95 3e-20
AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical ... 94 5e-20
U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical pr... 91 4e-19
U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical pr... 91 6e-19
Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical pr... 83 2e-16
Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical pr... 74 8e-14
AF106575-6|AAC78175.2| 244|Caenorhabditis elegans Hypothetical ... 62 3e-10
AF067949-1|AAC19236.2| 1446|Caenorhabditis elegans Suppressor of... 29 1.7
U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical pr... 29 2.9
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 29 2.9
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr... 29 2.9
AL032644-1|CAA21666.2| 604|Caenorhabditis elegans Hypothetical ... 28 3.9
Z81497-7|CAB04083.3| 652|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z75955-17|CAB00127.3| 652|Caenorhabditis elegans Hypothetical p... 27 6.7
Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical p... 27 6.7
Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z82075-3|CAB04929.2| 784|Caenorhabditis elegans Hypothetical pr... 27 8.9
AF293972-1|AAG02478.1| 784|Caenorhabditis elegans auxilin protein. 27 8.9
>AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical
protein F32B5.1 protein.
Length = 427
Score = 95.1 bits (226), Expect = 3e-20
Identities = 45/78 (57%), Positives = 61/78 (78%), Gaps = 3/78 (3%)
Frame = +2
Query: 32 KAATMVDAATLEKLEAGFSKLQGSDS---KSLLKKYLTREVFDSLKNKKTSFGSTLLDCI 202
+A + VDAAT++K+E ++KL G + KSLLKK+LT+EV + LK K+T G+TL DCI
Sbjct: 64 QAKSEVDAATIKKIEEAYAKLNGPEGAKCKSLLKKHLTKEVVEKLKTKRTKVGATLYDCI 123
Query: 203 QSGVENLDSGVGIYAPDA 256
+SGV NLD+GVG+YAPDA
Sbjct: 124 RSGVYNLDAGVGVYAPDA 141
Score = 57.6 bits (133), Expect = 5e-09
Identities = 32/80 (40%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +1
Query: 259 SYSVFAXLFDPIIEDYHNGFKKTDKHPPKNLGD--VDKLGTLNPAANSWAPTAFASGGRS 432
+Y++FA LFD IIEDYH GF K PP +LG+ + L+P T G
Sbjct: 143 AYTLFAPLFDKIIEDYH-GFSPKQKQPPVDLGEGKTKEFPPLDPKGKYIKSTRIRCGRSL 201
Query: 433 KGTPLIPCLTSPNTKRLKTK 492
KG P PCLT N ++ K
Sbjct: 202 KGYPFNPCLTQDNYLEMEGK 221
Score = 50.0 bits (114), Expect = 1e-06
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +3
Query: 375 LEPGGEFLGSNRVRFGRSLQGDPFNPLLNESQYKEIEDKV 494
L+P G+++ S R+R GRSL+G PFNP L + Y E+E KV
Sbjct: 183 LDPKGKYIKSTRIRCGRSLKGYPFNPCLTQDNYLEMEGKV 222
>AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical
protein W10C8.5 protein.
Length = 399
Score = 94.3 bits (224), Expect = 5e-20
Identities = 44/78 (56%), Positives = 61/78 (78%), Gaps = 3/78 (3%)
Frame = +2
Query: 32 KAATMVDAATLEKLEAGFSKLQGSDS---KSLLKKYLTREVFDSLKNKKTSFGSTLLDCI 202
+A + VDAAT++K+E ++KL G + KSLLKK+LT++V + LK K+T G+TL DCI
Sbjct: 36 QAKSEVDAATIKKIEEAYAKLNGPEGAKCKSLLKKHLTKDVVEKLKTKRTKLGATLYDCI 95
Query: 203 QSGVENLDSGVGIYAPDA 256
+SGV NLD+GVG+YAPDA
Sbjct: 96 RSGVYNLDAGVGVYAPDA 113
Score = 57.6 bits (133), Expect = 5e-09
Identities = 32/80 (40%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +1
Query: 259 SYSVFAXLFDPIIEDYHNGFKKTDKHPPKNLGD--VDKLGTLNPAANSWAPTAFASGGRS 432
+Y++FA LFD IIEDYH GF K PP +LG+ + L+P T G
Sbjct: 115 AYTLFAPLFDKIIEDYH-GFSPKQKQPPVDLGEGKTKEFPPLDPKGKYIKSTRIRCGRSL 173
Query: 433 KGTPLIPCLTSPNTKRLKTK 492
KG P PCLT N ++ K
Sbjct: 174 KGYPFNPCLTQDNYLEMEGK 193
Score = 50.0 bits (114), Expect = 1e-06
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +3
Query: 375 LEPGGEFLGSNRVRFGRSLQGDPFNPLLNESQYKEIEDKV 494
L+P G+++ S R+R GRSL+G PFNP L + Y E+E KV
Sbjct: 155 LDPKGKYIKSTRIRCGRSLKGYPFNPCLTQDNYLEMEGKV 194
>U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical
protein F46H5.3a protein.
Length = 396
Score = 91.5 bits (217), Expect = 4e-19
Identities = 46/81 (56%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
Frame = +2
Query: 17 CSSARKAATMVDAATLEKLEAGFSKLQGS-DSKSLLKKYLTREVFDSLKNKKTSFGSTLL 193
C A++ + V + K+E G++KLQ + + SLLKKYLT+EV D LK+KKT G+ LL
Sbjct: 31 CVQAQEGMS-VSPDVIAKIEEGYAKLQAAPECHSLLKKYLTKEVVDQLKDKKTKLGANLL 89
Query: 194 DCIQSGVENLDSGVGIYAPDA 256
D IQSGV NLDSGVG+YAPDA
Sbjct: 90 DVIQSGVANLDSGVGVYAPDA 110
Score = 57.6 bits (133), Expect = 5e-09
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +1
Query: 259 SYSVFAXLFDPIIEDYHNGFKKTDKHPPKNLGD--VDKLGTLNPAANSWAPTAFASGGRS 432
+Y++F LFDP+I+DYHNGF K P +LG+ L L+P T G
Sbjct: 112 AYTLFKPLFDPLIQDYHNGFAPDAKQPNTDLGEGKTSALVDLDPEGKFINSTRIRCGRSL 171
Query: 433 KGTPLIPCLTSPNTKRLKTK 492
+G P PCL+ N +++K
Sbjct: 172 QGYPFNPCLSEANYLEMESK 191
Score = 57.2 bits (132), Expect = 7e-09
Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Frame = +3
Query: 324 DRQAPAQELGRR*QAG--NLEPGGEFLGSNRVRFGRSLQGDPFNPLLNESQYKEIEDKV 494
D + P +LG + +L+P G+F+ S R+R GRSLQG PFNP L+E+ Y E+E KV
Sbjct: 134 DAKQPNTDLGEGKTSALVDLDPEGKFINSTRIRCGRSLQGYPFNPCLSEANYLEMESKV 192
>U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical
protein F46H5.3b protein.
Length = 359
Score = 90.6 bits (215), Expect = 6e-19
Identities = 44/71 (61%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Frame = +2
Query: 47 VDAATLEKLEAGFSKLQGS-DSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENL 223
V + K+E G++KLQ + + SLLKKYLT+EV D LK+KKT G+ LLD IQSGV NL
Sbjct: 3 VSPDVIAKIEEGYAKLQAAPECHSLLKKYLTKEVVDQLKDKKTKLGANLLDVIQSGVANL 62
Query: 224 DSGVGIYAPDA 256
DSGVG+YAPDA
Sbjct: 63 DSGVGVYAPDA 73
Score = 57.6 bits (133), Expect = 5e-09
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +1
Query: 259 SYSVFAXLFDPIIEDYHNGFKKTDKHPPKNLGD--VDKLGTLNPAANSWAPTAFASGGRS 432
+Y++F LFDP+I+DYHNGF K P +LG+ L L+P T G
Sbjct: 75 AYTLFKPLFDPLIQDYHNGFAPDAKQPNTDLGEGKTSALVDLDPEGKFINSTRIRCGRSL 134
Query: 433 KGTPLIPCLTSPNTKRLKTK 492
+G P PCL+ N +++K
Sbjct: 135 QGYPFNPCLSEANYLEMESK 154
Score = 57.2 bits (132), Expect = 7e-09
Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Frame = +3
Query: 324 DRQAPAQELGRR*QAG--NLEPGGEFLGSNRVRFGRSLQGDPFNPLLNESQYKEIEDKV 494
D + P +LG + +L+P G+F+ S R+R GRSLQG PFNP L+E+ Y E+E KV
Sbjct: 97 DAKQPNTDLGEGKTSALVDLDPEGKFINSTRIRCGRSLQGYPFNPCLSEANYLEMESKV 155
>Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical
protein ZC434.8 protein.
Length = 360
Score = 82.6 bits (195), Expect = 2e-16
Identities = 42/65 (64%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Frame = +2
Query: 65 EKLEAGFSKLQG-SDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGI 241
+ +E ++KLQG SD SLLKK+LT++V K+KKT G+TLLD IQSG ENLDSGVGI
Sbjct: 9 KSIEEVYTKLQGASDCSSLLKKHLTKDVVAKNKSKKTRLGATLLDVIQSGGENLDSGVGI 68
Query: 242 YAPDA 256
YAPDA
Sbjct: 69 YAPDA 73
Score = 71.7 bits (168), Expect = 3e-13
Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Frame = +1
Query: 259 SYSVFAXLFDPIIEDYHNGFKKTDKHPPKNLGD--VDKLGTLNPAANSWAPTAFASGGRS 432
SY++FA LF+P+IE+YHNGFK TD P +LG+ V +L L+P T G
Sbjct: 75 SYTLFADLFNPVIEEYHNGFKATDTQPAMDLGEKNVGELADLDPEGKFIVSTRIRCGRSL 134
Query: 433 KGTPLIPCLTSPNTKRLKTK 492
+G P PCL+ N K ++T+
Sbjct: 135 QGYPFNPCLSETNYKMMETR 154
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/55 (47%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
Frame = +3
Query: 336 PAQELGRR*--QAGNLEPGGEFLGSNRVRFGRSLQGDPFNPLLNESQYKEIEDKV 494
PA +LG + + +L+P G+F+ S R+R GRSLQG PFNP L+E+ YK +E ++
Sbjct: 101 PAMDLGEKNVGELADLDPEGKFIVSTRIRCGRSLQGYPFNPCLSETNYKMMETRM 155
>Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical
protein F44G3.2 protein.
Length = 372
Score = 73.7 bits (173), Expect = 8e-14
Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
Frame = +2
Query: 47 VDAATLEKLEAGFSKLQGSDS---KSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVE 217
VD T++K+E + L G D SLLKK LT++V + LK K T G+ L DCI+SGV
Sbjct: 14 VDPVTIKKIEEAYVMLNGPDGAKCSSLLKKNLTKDVIEKLKTKSTKLGANLYDCIRSGVY 73
Query: 218 NLDSGVGIYAPDA 256
LD+ VG+YAPDA
Sbjct: 74 CLDALVGVYAPDA 86
Score = 50.4 bits (115), Expect = 8e-07
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Frame = +3
Query: 315 LQEDRQAPAQELG--RR*QAGNLEPGGEFLGSNRVRFGRSLQGDPFNPLLNESQYKEIED 488
L D++ P +LG + + L+P G+++ S R+R GRSL G FNP L E Y E+E+
Sbjct: 106 LGPDQKQPPVDLGEGKTKEFPPLDPKGKYIKSTRIRCGRSLNGYQFNPCLTEDNYLEMEE 165
Query: 489 KV 494
KV
Sbjct: 166 KV 167
Score = 49.6 bits (113), Expect = 1e-06
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +1
Query: 259 SYSVFAXLFDPIIEDYHNGFKKTDKHPPKNLGD--VDKLGTLNPAANSWAPTAFASGGRS 432
+Y++FA LFD IIEDYH G K PP +LG+ + L+P T G
Sbjct: 88 AYTLFAPLFDKIIEDYH-GLGPDQKQPPVDLGEGKTKEFPPLDPKGKYIKSTRIRCGRSL 146
Query: 433 KGTPLIPCLTSPNTKRLKTK 492
G PCLT N ++ K
Sbjct: 147 NGYQFNPCLTEDNYLEMEEK 166
>AF106575-6|AAC78175.2| 244|Caenorhabditis elegans Hypothetical
protein K04F1.1 protein.
Length = 244
Score = 61.7 bits (143), Expect = 3e-10
Identities = 30/75 (40%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Frame = +2
Query: 32 KAATMVDAATLEKLEAGFSKLQGSDS---KSLLKKYLTREVFDSLKNKKTSFGSTLLDCI 202
+A + VDAAT++K+E + KL G + KSLL+KYLT+++ + LK K T G+++ DCI
Sbjct: 86 QAKSEVDAATIKKIEEAYVKLNGPEGAKCKSLLRKYLTKDIVEKLKTKCTKLGASVYDCI 145
Query: 203 QSGVENLDSGVGIYA 247
+G+ + G+ A
Sbjct: 146 LTGLRFVRQGLRFVA 160
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 271 FAXLFDPIIEDYHNGFKKTDKHPPKNLGD 357
F LF+ IED++ GF +K PP +LG+
Sbjct: 158 FVALFNKNIEDFY-GFSPKEKQPPVDLGE 185
>AF067949-1|AAC19236.2| 1446|Caenorhabditis elegans Suppressor of
constitutive dauerformation protein 2 protein.
Length = 1446
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 325 TDKHPPKNLGDVDKLGTLNPAANSWAPTAFASGGRSKGTPLIPCLT 462
TD+ PP +L D+++LG N P + PL+ C T
Sbjct: 1400 TDQTPPTSLIDLNRLGVQNTGPTLHRPDSLNFNDPYSSVPLLECQT 1445
>U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical
protein R07G3.3c protein.
Length = 1316
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +2
Query: 20 SSARKAATMVDAATLEKLEAGFSKLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDC 199
+SA +AA + + +L A + + S+++ K T+ FDSLK + F + D
Sbjct: 530 ASAAQAAINAQSEEMAQLRADLAVTKKSEAELKTKVEQTKAAFDSLKERTEHFKELVRDS 589
Query: 200 I 202
+
Sbjct: 590 V 590
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical
protein R07G3.3a protein.
Length = 1982
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +2
Query: 20 SSARKAATMVDAATLEKLEAGFSKLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDC 199
+SA +AA + + +L A + + S+++ K T+ FDSLK + F + D
Sbjct: 530 ASAAQAAINAQSEEMAQLRADLAVTKKSEAELKTKVEQTKAAFDSLKERTEHFKELVRDS 589
Query: 200 I 202
+
Sbjct: 590 V 590
>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical
protein R07G3.3b protein.
Length = 1987
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +2
Query: 20 SSARKAATMVDAATLEKLEAGFSKLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDC 199
+SA +AA + + +L A + + S+++ K T+ FDSLK + F + D
Sbjct: 530 ASAAQAAINAQSEEMAQLRADLAVTKKSEAELKTKVEQTKAAFDSLKERTEHFKELVRDS 589
Query: 200 I 202
+
Sbjct: 590 V 590
>AL032644-1|CAA21666.2| 604|Caenorhabditis elegans Hypothetical
protein Y51H1A.2 protein.
Length = 604
Score = 28.3 bits (60), Expect = 3.9
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Frame = +2
Query: 17 CSSARKAATMVDAATLEKLEAGFSKLQGSDSKSLLKKYLTREVF--DSLKNKKTSFGSTL 190
CSS +M+D+ + A L+GS S S+ + +++ S T ST+
Sbjct: 277 CSSVYSHPSMLDSGEMSYQHAVLGGLKGSSSSSMRRVASNQKIQLPQSPLFSSTPVDSTI 336
Query: 191 LDCIQSGVEN--LD--SGVGIYAPDA 256
LD ++ G N LD V APDA
Sbjct: 337 LDQVKIGKANSRLDFVQTVSDVAPDA 362
>Z81497-7|CAB04083.3| 652|Caenorhabditis elegans Hypothetical
protein R07B7.2 protein.
Length = 652
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2
Query: 418 KRTRLEPRNSPPGS 377
KR RLEP SPPGS
Sbjct: 572 KRARLEPSQSPPGS 585
>Z75955-17|CAB00127.3| 652|Caenorhabditis elegans Hypothetical
protein R07B7.2 protein.
Length = 652
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2
Query: 418 KRTRLEPRNSPPGS 377
KR RLEP SPPGS
Sbjct: 572 KRARLEPSQSPPGS 585
>Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical
protein C12D8.1c protein.
Length = 548
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 55 RNPREIGGWFQQAPGIRL*VAAEEVPYQGS-IRQPEEQ 165
+NP ++GGW Q + + A PY + I QP++Q
Sbjct: 391 QNPYQVGGWQQNSVYAQQTAAPAAAPYAAAGIVQPQQQ 428
>Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical
protein C12D8.1b protein.
Length = 611
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 55 RNPREIGGWFQQAPGIRL*VAAEEVPYQGS-IRQPEEQ 165
+NP ++GGW Q + + A PY + I QP++Q
Sbjct: 454 QNPYQVGGWQQNSVYAQQTAAPAAAPYAAAGIVQPQQQ 491
>Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical
protein C12D8.1a protein.
Length = 589
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 55 RNPREIGGWFQQAPGIRL*VAAEEVPYQGS-IRQPEEQ 165
+NP ++GGW Q + + A PY + I QP++Q
Sbjct: 432 QNPYQVGGWQQNSVYAQQTAAPAAAPYAAAGIVQPQQQ 469
>Z82075-3|CAB04929.2| 784|Caenorhabditis elegans Hypothetical
protein W07A8.3 protein.
Length = 784
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +1
Query: 337 PPKNLGDVDKLGTLNPAANSWAPTAFASGGRSKGTPLIPCLTSPNTKRLKTKSS 498
P K L T +PA +SW+ T GG S P T PNT+ +S
Sbjct: 539 PIKPTSSASNLSTASPATSSWSNTDLL-GGFSPMKPQTTS-TPPNTRNPSASNS 590
>AF293972-1|AAG02478.1| 784|Caenorhabditis elegans auxilin protein.
Length = 784
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +1
Query: 337 PPKNLGDVDKLGTLNPAANSWAPTAFASGGRSKGTPLIPCLTSPNTKRLKTKSS 498
P K L T +PA +SW+ T GG S P T PNT+ +S
Sbjct: 539 PIKPTSSASNLSTASPATSSWSNTDLL-GGFSPMKPQTTS-TPPNTRNPSASNS 590
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,429,582
Number of Sequences: 27780
Number of extensions: 249962
Number of successful extensions: 892
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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