Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0521.Seq
         (548 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.   123   1e-30
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.   101   4e-24
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    23   2.7  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   4.7  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   6.2  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   8.2  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   8.2  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   8.2  

>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score =  123 bits (296), Expect = 1e-30
 Identities = 58/71 (81%), Positives = 63/71 (88%)
 Frame = +2

Query: 44  MVDAATLEKLEAGFSKLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENL 223
           MVD A L+KLE GFSKL  SDSKSLLKKYL+++VFD LK KKTSF STLLDCIQSG+ENL
Sbjct: 1   MVDQAVLDKLETGFSKLSSSDSKSLLKKYLSKDVFDQLKTKKTSFDSTLLDCIQSGIENL 60

Query: 224 DSGVGIYAPDA 256
           DSGVGIYAPDA
Sbjct: 61  DSGVGIYAPDA 71



 Score =  101 bits (243), Expect = 4e-24
 Identities = 51/97 (52%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
 Frame = +1

Query: 259 SYSVFAXLFDPIIEDYHNGFKKTDKHPPKNLGDVDKLGTLNPAANSWAPTAFASGGRSKG 438
           +Y++FA LFDPIIEDYH GFKKTDKHPPK+ GDVD LG L+PA      T    G   +G
Sbjct: 73  AYTLFADLFDPIIEDYHGGFKKTDKHPPKDFGDVDSLGNLDPANEFIVSTRVRCGRSLEG 132

Query: 439 TPLIPCLTSPNTKRLKTKSSGTC*PPRG-TQGTF*PL 546
            P  PCLT    K ++ K S T     G  +GTF PL
Sbjct: 133 YPFNPCLTEAQYKEMEEKVSSTLSGLEGELKGTFYPL 169


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score =  101 bits (243), Expect = 4e-24
 Identities = 51/97 (52%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
 Frame = +1

Query: 259 SYSVFAXLFDPIIEDYHNGFKKTDKHPPKNLGDVDKLGTLNPAANSWAPTAFASGGRSKG 438
           +Y++FA LFDPIIEDYH GFKKTDKHPPK+ GDVD LG L+PA      T    G   +G
Sbjct: 57  AYTLFADLFDPIIEDYHGGFKKTDKHPPKDFGDVDSLGNLDPANEFIVSTRVRCGRSLEG 116

Query: 439 TPLIPCLTSPNTKRLKTKSSGTC*PPRG-TQGTF*PL 546
            P  PCLT    K ++ K S T     G  +GTF PL
Sbjct: 117 YPFNPCLTEAQYKEMEEKVSSTLSGLEGELKGTFYPL 153



 Score = 99.5 bits (237), Expect = 2e-23
 Identities = 46/55 (83%), Positives = 50/55 (90%)
 Frame = +2

Query: 92  LQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDA 256
           L  SDSKSLLKKYL+++VFD LK KKTSF STLLDCIQSG+ENLDSGVGIYAPDA
Sbjct: 1   LSSSDSKSLLKKYLSKDVFDQLKTKKTSFDSTLLDCIQSGIENLDSGVGIYAPDA 55


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 139 GSIRQPEEQKDLIRIHPP 192
           GS  QP+EQ+ L  + PP
Sbjct: 33  GSAEQPKEQEPLPPVTPP 50


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 21 QVPEKPQQWSTPQPSR 68
          Q P+ PQ+ S P PS+
Sbjct: 29 QSPQAPQRGSPPNPSQ 44


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +3

Query: 294 HRGLPQWLQEDRQAPAQEL 350
           H G   W QED  A  + L
Sbjct: 405 HHGSKSWTQEDMDAALEAL 423


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +1

Query: 259 SYSVFAXLFDPIIEDYHNGFKKTDKHPPKN 348
           S ++   L++ +   Y N FK+T +  P N
Sbjct: 308 STTINPILYNVMSAKYRNAFKETCRCSPSN 337


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 168 FLFFRLSNTSLVRYFFSSDLESD 100
           F+F  L   +LV Y   SD+ SD
Sbjct: 314 FVFGALLEFALVNYASRSDMHSD 336


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 168 FLFFRLSNTSLVRYFFSSDLESD 100
           F+F  L   +LV Y   SD+ SD
Sbjct: 314 FVFGALLEFALVNYASRSDMHSD 336


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,042
Number of Sequences: 438
Number of extensions: 3324
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)