Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0520.Seq
(606 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 123 1e-28
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 123 1e-28
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 122 2e-28
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 121 5e-28
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 121 5e-28
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 120 7e-28
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 119 2e-27
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 3e-27
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 8e-23
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 4e-17
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 83 1e-16
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 83 2e-16
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 7e-16
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 80 2e-15
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 2e-15
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 76 2e-14
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 75 6e-14
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 74 8e-14
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 74 1e-13
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 67 1e-11
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 60 1e-09
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 34 0.10
SB_26663| Best HMM Match : Telo_bind (HMM E-Value=1.8e-17) 33 0.24
SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 29 2.2
SB_57096| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_27853| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_20256| Best HMM Match : RCSD (HMM E-Value=0.41) 29 3.9
SB_2270| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_50641| Best HMM Match : Rad21_Rec8_N (HMM E-Value=0) 29 3.9
SB_34906| Best HMM Match : Cadherin (HMM E-Value=0) 28 6.7
SB_22262| Best HMM Match : Oleosin (HMM E-Value=0.98) 28 6.7
SB_10201| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 123 bits (297), Expect = 1e-28
Identities = 55/81 (67%), Positives = 65/81 (80%)
Frame = +1
Query: 265 DSCFNTFFSEADRGKMVPTVVMVDLEATVIDEVRSGEYRQLYHPAQLITGKEDAADNYAR 444
D FNTFFSE GK VP V VDLE TV+DEVR+G YRQL+HP QLITGKEDAA+NYAR
Sbjct: 45 DDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAR 104
Query: 445 GHYSTGREVLSPAIERIRKLA 507
GHY+ G+E++ ++RIRKLA
Sbjct: 105 GHYTVGKEIIDLVLDRIRKLA 125
Score = 77.0 bits (181), Expect = 1e-14
Identities = 30/40 (75%), Positives = 37/40 (92%)
Frame = +2
Query: 131 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACET 250
RECIS+HVGQAGVQ+G ACW+LYCLEHGI+PDG +P+ +T
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKT 40
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 510 QCTGLQGCFVFHXXXXXXXXXXXXLLMEK 596
QCTGLQG +FH LLME+
Sbjct: 127 QCTGLQGFLIFHSFGGGTGSGFTSLLMER 155
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 123 bits (296), Expect = 1e-28
Identities = 55/81 (67%), Positives = 65/81 (80%)
Frame = +1
Query: 265 DSCFNTFFSEADRGKMVPTVVMVDLEATVIDEVRSGEYRQLYHPAQLITGKEDAADNYAR 444
D FNTFFSE GK VP V VDLE TV+DEVR+G YRQL+HP QLITGKEDAA+NYAR
Sbjct: 479 DDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAR 538
Query: 445 GHYSTGREVLSPAIERIRKLA 507
GHY+ G+E++ ++RIRKLA
Sbjct: 539 GHYTVGKEIVDLVLDRIRKLA 559
Score = 122 bits (295), Expect = 2e-28
Identities = 54/81 (66%), Positives = 65/81 (80%)
Frame = +1
Query: 265 DSCFNTFFSEADRGKMVPTVVMVDLEATVIDEVRSGEYRQLYHPAQLITGKEDAADNYAR 444
D FNTFFSE GK VP V VDLE TV+DEVR+G YRQL+HP QL+TGKEDAA+NYAR
Sbjct: 46 DDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYAR 105
Query: 445 GHYSTGREVLSPAIERIRKLA 507
GHY+ G+E++ ++RIRKLA
Sbjct: 106 GHYTVGKEIVDLVLDRIRKLA 126
Score = 79.0 bits (186), Expect = 3e-15
Identities = 31/41 (75%), Positives = 38/41 (92%)
Frame = +2
Query: 128 MRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACET 250
MRECIS+HVGQAGVQ+G ACW+LYCLEHGI+PDG +P+ +T
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKT 41
Score = 77.0 bits (181), Expect = 1e-14
Identities = 30/40 (75%), Positives = 37/40 (92%)
Frame = +2
Query: 131 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACET 250
RECIS+HVGQAGVQ+G ACW+LYCLEHGI+PDG +P+ +T
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKT 474
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 510 QCTGLQGCFVFHXXXXXXXXXXXXLLMEK 596
QCTGLQG +FH LLME+
Sbjct: 128 QCTGLQGFLIFHSFGGGTGSGFSSLLMER 156
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 510 QCTGLQGCFVFHXXXXXXXXXXXXLLMEK 596
QCTGLQG +FH LLME+
Sbjct: 561 QCTGLQGFLIFHSFGGGTGSGFSSLLMER 589
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 122 bits (295), Expect = 2e-28
Identities = 55/81 (67%), Positives = 65/81 (80%)
Frame = +1
Query: 265 DSCFNTFFSEADRGKMVPTVVMVDLEATVIDEVRSGEYRQLYHPAQLITGKEDAADNYAR 444
D FNTFFSE GK VP V VDLE TV+DEVR+G YRQL+HP QLITGKEDAA+NYAR
Sbjct: 110 DDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAR 169
Query: 445 GHYSTGREVLSPAIERIRKLA 507
GHY+ G+E++ ++RIRKLA
Sbjct: 170 GHYTIGKEIVDLVLDRIRKLA 190
Score = 122 bits (295), Expect = 2e-28
Identities = 55/81 (67%), Positives = 65/81 (80%)
Frame = +1
Query: 265 DSCFNTFFSEADRGKMVPTVVMVDLEATVIDEVRSGEYRQLYHPAQLITGKEDAADNYAR 444
D FNTFFSE GK VP V VDLE TV+DEVR+G YRQL+HP QLITGKEDAA+NYAR
Sbjct: 631 DDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAR 690
Query: 445 GHYSTGREVLSPAIERIRKLA 507
GHY+ G+E++ ++RIRKLA
Sbjct: 691 GHYTVGKELIDLVLDRIRKLA 711
Score = 79.0 bits (186), Expect = 3e-15
Identities = 32/51 (62%), Positives = 42/51 (82%)
Frame = +2
Query: 98 SDLPKFPVLNMRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACET 250
+ + F ++ RECISVHVGQAGVQ+G ACW+LYCLEHGI+PDG +P+ +T
Sbjct: 55 TQIDTFILILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKT 105
Score = 77.4 bits (182), Expect = 8e-15
Identities = 30/41 (73%), Positives = 38/41 (92%)
Frame = +2
Query: 128 MRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACET 250
+RECIS+HVGQAGVQ+G ACW+LYCLEHGI+PDG +P+ +T
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKT 626
Score = 77.0 bits (181), Expect = 1e-14
Identities = 30/40 (75%), Positives = 37/40 (92%)
Frame = +2
Query: 131 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACET 250
RECIS+HVGQAGVQ+G ACW+LYCLEHGI+PDG +P+ +T
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKT 553
Score = 40.7 bits (91), Expect = 9e-04
Identities = 19/29 (65%), Positives = 19/29 (65%)
Frame = +1
Query: 265 DSCFNTFFSEADRGKMVPTVVMVDLEATV 351
D FNTFFSE GK VP V VDLE TV
Sbjct: 558 DDSFNTFFSETGAGKHVPRAVFVDLEPTV 586
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 510 QCTGLQGCFVFHXXXXXXXXXXXXLLMEK 596
QCTGLQG +FH LLME+
Sbjct: 192 QCTGLQGFLIFHSFGGGTGSGFSSLLMER 220
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 510 QCTGLQGCFVFHXXXXXXXXXXXXLLMEK 596
QCTGLQG +FH LLME+
Sbjct: 713 QCTGLQGFLIFHSFGGGTGSGFSSLLMER 741
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 121 bits (291), Expect = 5e-28
Identities = 54/81 (66%), Positives = 64/81 (79%)
Frame = +1
Query: 265 DSCFNTFFSEADRGKMVPTVVMVDLEATVIDEVRSGEYRQLYHPAQLITGKEDAADNYAR 444
D FNTFFSE GK VP V DLE TV+DEVR+G YRQL+HP QLITGKEDAA+NYAR
Sbjct: 850 DDSFNTFFSETGAGKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAR 909
Query: 445 GHYSTGREVLSPAIERIRKLA 507
GHY+ G+E++ ++RIRKLA
Sbjct: 910 GHYTVGKEMIDLVLDRIRKLA 930
Score = 120 bits (289), Expect = 9e-28
Identities = 54/81 (66%), Positives = 64/81 (79%)
Frame = +1
Query: 265 DSCFNTFFSEADRGKMVPTVVMVDLEATVIDEVRSGEYRQLYHPAQLITGKEDAADNYAR 444
D FNTFF+E GK VP V VDLE TVIDEVR+G YRQL+HP QLITGKEDAA+NYAR
Sbjct: 417 DDAFNTFFAETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYAR 476
Query: 445 GHYSTGREVLSPAIERIRKLA 507
GHY+ G+E + ++R+RKLA
Sbjct: 477 GHYTVGKEQIDIVLDRLRKLA 497
Score = 79.0 bits (186), Expect = 3e-15
Identities = 32/40 (80%), Positives = 37/40 (92%)
Frame = +2
Query: 131 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACET 250
RECISVHVGQAGVQMG ACW+LYCLEHGI+PDG +P+ +T
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKT 845
Score = 77.0 bits (181), Expect = 1e-14
Identities = 30/40 (75%), Positives = 37/40 (92%)
Frame = +2
Query: 131 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACET 250
RECIS+HVGQAGVQ+G ACW+LYCLEHGI+PDG +P+ +T
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKT 412
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 510 QCTGLQGCFVFHXXXXXXXXXXXXLLMEK 596
QCTGLQG +FH LLME+
Sbjct: 932 QCTGLQGFLIFHSFGGGTGSGFTSLLMER 960
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 513 CTGLQGCFVFHXXXXXXXXXXXXLLMEK 596
CTGLQG +FH LLME+
Sbjct: 500 CTGLQGFLIFHSFGGGTGSGFTSLLMER 527
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 121 bits (291), Expect = 5e-28
Identities = 54/81 (66%), Positives = 64/81 (79%)
Frame = +1
Query: 265 DSCFNTFFSEADRGKMVPTVVMVDLEATVIDEVRSGEYRQLYHPAQLITGKEDAADNYAR 444
D FNTFFSE GK VP V VDLE TV+DEVR+G YRQL+HP QLITGKEDAA+NYAR
Sbjct: 46 DDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAR 105
Query: 445 GHYSTGREVLSPAIERIRKLA 507
GHY+ G+E++ ++R RKLA
Sbjct: 106 GHYTIGKEIIDLVLDRCRKLA 126
Score = 80.6 bits (190), Expect = 9e-16
Identities = 32/41 (78%), Positives = 38/41 (92%)
Frame = +2
Query: 128 MRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACET 250
MRECIS+HVGQAGVQMG ACW+LYCLEHGI+PDG +P+ +T
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKT 41
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 510 QCTGLQGCFVFHXXXXXXXXXXXXLLMEK 596
QCTGLQG +FH LLME+
Sbjct: 128 QCTGLQGFLIFHSFGGGTGSGFASLLMER 156
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 120 bits (290), Expect = 7e-28
Identities = 53/81 (65%), Positives = 64/81 (79%)
Frame = +1
Query: 265 DSCFNTFFSEADRGKMVPTVVMVDLEATVIDEVRSGEYRQLYHPAQLITGKEDAADNYAR 444
D FNTFFSE GK VP V DLE TV+DEVR+G YRQL+HP QLITGKEDAA+NYAR
Sbjct: 46 DDSFNTFFSETGSGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAR 105
Query: 445 GHYSTGREVLSPAIERIRKLA 507
GHY+ G+E++ ++R+RKLA
Sbjct: 106 GHYTVGKEMIDTVLDRLRKLA 126
Score = 81.0 bits (191), Expect = 7e-16
Identities = 33/41 (80%), Positives = 38/41 (92%)
Frame = +2
Query: 128 MRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACET 250
MRECISVHVGQAGVQMG ACW+LYCLEHGI+PDG +P+ +T
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKT 41
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 513 CTGLQGCFVFHXXXXXXXXXXXXLLMEK 596
CTGLQG +FH LLME+
Sbjct: 129 CTGLQGFLIFHSFGGGTGSGFSSLLMER 156
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 119 bits (286), Expect = 2e-27
Identities = 53/81 (65%), Positives = 65/81 (80%)
Frame = +1
Query: 265 DSCFNTFFSEADRGKMVPTVVMVDLEATVIDEVRSGEYRQLYHPAQLITGKEDAADNYAR 444
D FNTFF+E GK VP V VDLE TVIDE+R+G YRQL+HP QL++GKEDAA+NYAR
Sbjct: 11 DDSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYAR 70
Query: 445 GHYSTGREVLSPAIERIRKLA 507
GHY+ G+E + A++RIRKLA
Sbjct: 71 GHYTVGKEHIDLALDRIRKLA 91
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 510 QCTGLQGCFVFHXXXXXXXXXXXXLLMEK 596
QCTGLQG +FH LLME+
Sbjct: 93 QCTGLQGFLIFHSFGGGTGSGFSSLLMER 121
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 118 bits (285), Expect = 3e-27
Identities = 52/81 (64%), Positives = 64/81 (79%)
Frame = +1
Query: 265 DSCFNTFFSEADRGKMVPTVVMVDLEATVIDEVRSGEYRQLYHPAQLITGKEDAADNYAR 444
D FNTFFSE GK VP V DLE TV+DEVR+G YRQL+HP QLITGKEDAA+NYAR
Sbjct: 31 DDSFNTFFSETGAGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAR 90
Query: 445 GHYSTGREVLSPAIERIRKLA 507
GHY+ G++++ ++R+RKLA
Sbjct: 91 GHYTVGKQLIEIVLDRLRKLA 111
Score = 118 bits (285), Expect = 3e-27
Identities = 53/81 (65%), Positives = 64/81 (79%)
Frame = +1
Query: 265 DSCFNTFFSEADRGKMVPTVVMVDLEATVIDEVRSGEYRQLYHPAQLITGKEDAADNYAR 444
D FNTFFSE GK VP V VDLE +VIDE+R+G YRQL+HP QLITGKEDAA+NYAR
Sbjct: 464 DDSFNTFFSETGAGKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYAR 523
Query: 445 GHYSTGREVLSPAIERIRKLA 507
GHY+ G++ + ++RIRKLA
Sbjct: 524 GHYTVGKDHIDNVLDRIRKLA 544
Score = 78.2 bits (184), Expect = 5e-15
Identities = 30/40 (75%), Positives = 37/40 (92%)
Frame = +2
Query: 131 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACET 250
REC+S+HVGQAGVQMG ACW+LYCLEHGI+PDG +P+ +T
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKT 459
Score = 49.6 bits (113), Expect = 2e-06
Identities = 18/26 (69%), Positives = 23/26 (88%)
Frame = +2
Query: 173 MGVACWQLYCLEHGIRPDGTLPACET 250
MG ACW+LYCLEHGI+PDG +P+ +T
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKT 26
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 510 QCTGLQGCFVFHXXXXXXXXXXXXLLMEK 596
QCTGLQG +FH LLME+
Sbjct: 113 QCTGLQGFLIFHSFGGGTGSGFSSLLMER 141
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 103 bits (248), Expect = 8e-23
Identities = 46/72 (63%), Positives = 59/72 (81%)
Frame = +1
Query: 289 SEADRGKMVPTVVMVDLEATVIDEVRSGEYRQLYHPAQLITGKEDAADNYARGHYSTGRE 468
SEA GK VP V+VDLE TVIDEVR+G YR LYHP Q+I+GKEDAA+NYARGHY+ G+E
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 469 VLSPAIERIRKL 504
++ +++IRK+
Sbjct: 1025 MVEVVMDKIRKM 1036
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 85.0 bits (201), Expect = 4e-17
Identities = 36/51 (70%), Positives = 45/51 (88%)
Frame = +1
Query: 355 DEVRSGEYRQLYHPAQLITGKEDAADNYARGHYSTGREVLSPAIERIRKLA 507
DEVR+G YRQL+HP QLITGKEDAA+NYARGHY+ G+E++ ++RIRKLA
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLA 63
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 510 QCTGLQGCFVFHXXXXXXXXXXXXLLMEK 596
QCTGLQG +FH LLME+
Sbjct: 65 QCTGLQGFLIFHSFGGGTGSGFSSLLMER 93
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 83.4 bits (197), Expect = 1e-16
Identities = 43/81 (53%), Positives = 52/81 (64%)
Frame = +1
Query: 265 DSCFNTFFSEADRGKMVPTVVMVDLEATVIDEVRSGEYRQLYHPAQLITGKEDAADNYAR 444
D FNTFFSE GK VP V VDLE TV+ P QLITGKEDAA+NYAR
Sbjct: 46 DDSFNTFFSETGAGKHVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYAR 95
Query: 445 GHYSTGREVLSPAIERIRKLA 507
GHY+ G++ + ++R+RKLA
Sbjct: 96 GHYTIGKQQVDQVLDRLRKLA 116
Score = 79.0 bits (186), Expect = 3e-15
Identities = 31/41 (75%), Positives = 38/41 (92%)
Frame = +2
Query: 128 MRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACET 250
MRECIS+HVGQAGVQ+G ACW+LYCLEHGI+PDG +P+ +T
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKT 41
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 510 QCTGLQGCFVFHXXXXXXXXXXXXLLMEK 596
QC+GLQG F+FH LLME+
Sbjct: 118 QCSGLQGFFIFHSFGGGTGSGFSSLLMER 146
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 82.6 bits (195), Expect = 2e-16
Identities = 35/50 (70%), Positives = 44/50 (88%)
Frame = +1
Query: 358 EVRSGEYRQLYHPAQLITGKEDAADNYARGHYSTGREVLSPAIERIRKLA 507
EVR+G YRQL+HP QLITGKEDAA+NYARGHY+ G+E++ ++RIRKLA
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLA 51
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 510 QCTGLQGCFVFHXXXXXXXXXXXXLLMEK 596
QCTGLQG +FH LLME+
Sbjct: 53 QCTGLQGFLIFHSFGGGTGSGFSSLLMER 81
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 81.0 bits (191), Expect = 7e-16
Identities = 34/49 (69%), Positives = 43/49 (87%)
Frame = +1
Query: 358 EVRSGEYRQLYHPAQLITGKEDAADNYARGHYSTGREVLSPAIERIRKL 504
EVR+G YRQL+HP QLITGKEDAA+NYARGHY+ G+E++ ++RIRKL
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKL 50
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 79.8 bits (188), Expect = 2e-15
Identities = 33/50 (66%), Positives = 44/50 (88%)
Frame = +1
Query: 358 EVRSGEYRQLYHPAQLITGKEDAADNYARGHYSTGREVLSPAIERIRKLA 507
E+R+G YRQL+HP QL++GKEDAA+NYARGHY+ G+E + A++RIRKLA
Sbjct: 2 EIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLA 51
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 510 QCTGLQGCFVFHXXXXXXXXXXXXLLMEK 596
QCTGLQG +FH LLME+
Sbjct: 53 QCTGLQGFLIFHSFGGGTGSGFSSLLMER 81
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 79.4 bits (187), Expect = 2e-15
Identities = 32/41 (78%), Positives = 38/41 (92%)
Frame = +2
Query: 128 MRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACET 250
MRECISVHVGQAGVQ+G ACW+LYCLEHGI+PDG +P+ +T
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKT 41
Score = 40.7 bits (91), Expect = 9e-04
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +1
Query: 265 DSCFNTFFSEADRGKMVPTVVMVDLEATVIDEVR 366
D FNTFFSE GK VP V VDLE +V+ ++
Sbjct: 46 DDSFNTFFSETGGGKHVPRAVFVDLEPSVVGRMK 79
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 77.0 bits (181), Expect = 1e-14
Identities = 29/41 (70%), Positives = 37/41 (90%)
Frame = +2
Query: 119 VLNMRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPA 241
+ MREC+S+HVGQAGVQ+G ACW+LYCLEHGI+PDG +P+
Sbjct: 193 IQTMRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPS 233
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +3
Query: 510 QCTGLQGCFVFHXXXXXXXXXXXXLLMEK 596
QCTGLQG VFH LLME+
Sbjct: 259 QCTGLQGFLVFHSFGGGTGSGFSSLLMER 287
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 76.2 bits (179), Expect = 2e-14
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = +1
Query: 358 EVRSGEYRQLYHPAQLITGKEDAADNYARGHYSTGREVLSPAIERIRKL 504
EVR G YR L+HP QLITGKEDAA+NYARGHY+ G+E + +E+IRKL
Sbjct: 2 EVRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRKL 50
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 74.5 bits (175), Expect = 6e-14
Identities = 31/77 (40%), Positives = 50/77 (64%)
Frame = +1
Query: 277 NTFFSEADRGKMVPTVVMVDLEATVIDEVRSGEYRQLYHPAQLITGKEDAADNYARGHYS 456
N +++EA GK VP V+VDLE +D VRSG + Q++ P + G+ A +N+A+GHY+
Sbjct: 261 NVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 320
Query: 457 TGREVLSPAIERIRKLA 507
G E++ ++ +RK A
Sbjct: 321 EGAELVDSVLDVVRKEA 337
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 119 VLNMRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDL-IQRI 268
+ MRE + GQ G Q+G W++ EHGI P GT ++DL ++RI
Sbjct: 211 LFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHG-DSDLQLERI 260
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 74.1 bits (174), Expect = 8e-14
Identities = 30/77 (38%), Positives = 50/77 (64%)
Frame = +1
Query: 277 NTFFSEADRGKMVPTVVMVDLEATVIDEVRSGEYRQLYHPAQLITGKEDAADNYARGHYS 456
N +++EA GK VP ++VDLE +D VRSG + Q++ P + G+ A +N+A+GHY+
Sbjct: 48 NVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 107
Query: 457 TGREVLSPAIERIRKLA 507
G E++ ++ +RK A
Sbjct: 108 EGAELVDSVLDVVRKEA 124
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +2
Query: 128 MRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDL-IQRI 268
MRE + GQ G Q+G W++ EHGI P GT ++DL ++RI
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHG-DSDLQLERI 47
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 73.7 bits (173), Expect = 1e-13
Identities = 30/77 (38%), Positives = 50/77 (64%)
Frame = +1
Query: 277 NTFFSEADRGKMVPTVVMVDLEATVIDEVRSGEYRQLYHPAQLITGKEDAADNYARGHYS 456
N +++EA GK VP V++DLE +D VRSG + Q++ P + G+ A +N+A+GHY+
Sbjct: 48 NVYYNEATGGKYVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 107
Query: 457 TGREVLSPAIERIRKLA 507
G E++ ++ +RK A
Sbjct: 108 EGAELMDSVLDVVRKEA 124
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +2
Query: 128 MRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDL-IQRI 268
MRE +S+ GQ G Q+G W++ EHGI P GT ++DL ++RI
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHG-DSDLQLERI 47
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 66.9 bits (156), Expect = 1e-11
Identities = 28/68 (41%), Positives = 44/68 (64%)
Frame = +1
Query: 304 GKMVPTVVMVDLEATVIDEVRSGEYRQLYHPAQLITGKEDAADNYARGHYSTGREVLSPA 483
GK VP V+VDLE +D VRSG + Q++ P + G+ A +N+A+GHY+ G E++
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 484 IERIRKLA 507
++ +RK A
Sbjct: 62 LDVVRKEA 69
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 60.1 bits (139), Expect = 1e-09
Identities = 26/70 (37%), Positives = 41/70 (58%)
Frame = +1
Query: 304 GKMVPTVVMVDLEATVIDEVRSGEYRQLYHPAQLITGKEDAADNYARGHYSTGREVLSPA 483
G+ VP ++VDLE +D VR G ++ P + + AA+N+A+GHYS G E++
Sbjct: 13 GRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNI 72
Query: 484 IERIRKLAVN 513
+ +RK A N
Sbjct: 73 FDVLRKEAEN 82
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 46.0 bits (104), Expect = 2e-05
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +1
Query: 277 NTFFSEADRGKMVPTVVMVDLEATVIDEVRSGEYRQLYHPAQLI 408
N +++EA GK VP ++VDLE +D VRSG + Q++ P +
Sbjct: 48 NVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFV 91
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +2
Query: 128 MRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDL-IQRI 268
MRE + GQ G Q+G W++ EHGI P GT ++DL ++RI
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHG-DSDLQLERI 47
>SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1190
Score = 35.5 bits (78), Expect = 0.034
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -2
Query: 311 IFPRSASEKNVLKQESAVLDQFHKRAGFRQVGSRAPSSIAASTRRPSGPRLGPRVRICT 135
++P S+ +KQ S V + R + S +RP GPR+GP++R+ T
Sbjct: 371 LYPAQPSQHPKIKQSSYVYHTSPGKPSHRGANISLLFKLPRSNKRPMGPRVGPQIRVYT 429
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1
Query: 415 KEDAADNYARGHYSTGREVLSPAIERIRKLAVN 513
+ AA+N+A+G Y+ G E++ ++ IRKLA N
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAEN 34
>SB_26663| Best HMM Match : Telo_bind (HMM E-Value=1.8e-17)
Length = 1086
Score = 32.7 bits (71), Expect = 0.24
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = -2
Query: 224 QVGSRAPSSIAASTRRPSGPRLGPRVRICTPSYLKLEILVNPI 96
QVGSR P A R+ G +LGP+V + TP ++ +L NP+
Sbjct: 308 QVGSRPPKP-APQGRKGKGFKLGPKVALSTP--MEKSVLRNPV 347
>SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3474
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = -2
Query: 338 KSTMTTVGTIFPRSASEKNVLKQESAVLDQFHKRAGFRQVGSRAPSSIAASTRRPSGP 165
K M T+ PR +E + ++Q+ +L K FRQ+ R ++ S + P P
Sbjct: 3051 KEAMGVGKTVIPREPTEFDNIRQQCHLLRYMLKSRAFRQMEYRCEQILSKSVKAPQSP 3108
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 510 QCTGLQGCFVFHXXXXXXXXXXXXLLMEK 596
QCTGLQG +FH LLME+
Sbjct: 3 QCTGLQGFLIFHSFGGGTGSGFSSLLMER 31
>SB_57096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -1
Query: 309 LPSISLRKKRIEAGIRCIRSVSQAGRVPSGRIPC 208
LPS L R+ +G R + +GR+PSGR+PC
Sbjct: 410 LPSGPLPSGRLPSGCLPSRRLP-SGRLPSGRLPC 442
>SB_27853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 642
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 265 DSCFNTFFSEADRGKMVPTVVMVDLEATVIDEVRSGEYRQLYH 393
DS FNT S + RGK EA +++ ++SG Y ++H
Sbjct: 94 DSSFNT--SPSVRGKTKQECQKEGYEACIVNTIKSGTYCNIWH 134
>SB_20256| Best HMM Match : RCSD (HMM E-Value=0.41)
Length = 247
Score = 28.7 bits (61), Expect = 3.9
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = -2
Query: 362 TSSITVA--SKSTMTTVGTIFPRSASEKNVLKQESAVLDQFHKRAGFRQVGSRAPSSIAA 189
TS I VA +KS MT ++AS+KN K+ S L + + PSS
Sbjct: 80 TSPIMVALNAKSDMTIKSIKNKKAASDKNGDKKTSTSLKKTQHARSTKMKKQNNPSSKTK 139
Query: 188 STRRPSGP 165
T+R S P
Sbjct: 140 PTKRQSEP 147
>SB_2270| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 542
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2
Query: 260 VLDQFHKRAGFRQVGSRAPSSIAASTRRPSGPRLGP 153
V + H R+ F ++ S A S++A + P G RLGP
Sbjct: 381 VAEFLHGRSQFVKIESAASSTLALNGGIPQGTRLGP 416
>SB_50641| Best HMM Match : Rad21_Rec8_N (HMM E-Value=0)
Length = 816
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = -2
Query: 377 YSPERTSSITVASKSTMTTVGTIFPRSASEKNVLKQESAVLDQFHKRAGFRQVGSR 210
Y+P TSS V K TV + S+KN LK VL+ AG R+ GS+
Sbjct: 51 YTPYDTSSTEVLEKLGWRTVADKLRKKRSDKNRLKAGDLVLN-----AGEREKGSK 101
>SB_34906| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 3922
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 110 KFPVLNMRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPAC 244
+F +++ + V V + V+ G C + +C G DGT P C
Sbjct: 3550 RFQGVSLEDSPDVEVRRQNVRKGCPCAEGFCENGGTCVDGTPPYC 3594
>SB_22262| Best HMM Match : Oleosin (HMM E-Value=0.98)
Length = 418
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -2
Query: 239 RAGF-RQVGSRAPSSIAASTRRPSGPRLGPRVRICTPSYLKLEI 111
R+G Q RA ++ S R PS R G +R C +L+L +
Sbjct: 271 RSGLSNQTTPRATTTHPNSPREPSDARYGSELRACAERHLRLHL 314
>SB_10201| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1162
Score = 27.9 bits (59), Expect = 6.7
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Frame = -1
Query: 384 LAVFAGTNFVYNSSL*INHDDRRHHLPSISLRKKRIEAGI---RCIRSVS---QAGRVPS 223
LA +F Y S+ N ++ + H+ + + ++ +E I I +VS + + P+
Sbjct: 144 LASLPDDSFYYLKSISGNRENFKAHVLTEDITEENLELWISEYEVINNVSIKLKTKKNPT 203
Query: 222 GRIPCSKQYSCQHATPIWTPA 160
Y CQH T W+P+
Sbjct: 204 SGYVLQNYYRCQHNTRNWSPS 224
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,606,397
Number of Sequences: 59808
Number of extensions: 340411
Number of successful extensions: 1193
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1190
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1475788250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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