Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0520.Seq
         (606 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    45   2e-06
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   3.3  

>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 45.2 bits (102), Expect = 2e-06
 Identities = 31/93 (33%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
 Frame = +2

Query: 128 MRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDLIQRI-PASIRFFLRLIE 304
           MRECISVHVGQAGVQ+G  CW   C    +  + T+    T   + +   S     RL +
Sbjct: 1   MRECISVHVGQAGVQIGNPCWD--CTVWSMASNRTVRCPRTRRSEAVMTRSTPSSPRLAQ 58

Query: 305 GXXXXXXXXXXXXXXXXTKFVPANTANCITLHS 403
                             +  PA TA+C T  S
Sbjct: 59  ASTCPVPCSSIWSRPSSMRCAPARTASCSTRSS 91


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -2

Query: 185  TRRPSGPRLGPR 150
            T RPSGP +GPR
Sbjct: 1144 TFRPSGPAMGPR 1155


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 554,401
Number of Sequences: 2352
Number of extensions: 10221
Number of successful extensions: 23
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)