Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0518.Seq
(648 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25B8.01 |dap1|SPAC26H5.15|cytochrome P450 regulator Dap1|Sch... 85 6e-18
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 29 0.58
SPAC959.03c |||U3 snoRNP-associated protein Utp7|Schizosaccharom... 28 1.0
SPAC4F10.10c |||mannosyltransferase complex subunit, Anp family ... 28 1.3
SPBC1A4.06c |||mitochondrial matrix protein import protein|Schiz... 27 3.1
SPBC902.06 |mto2||MT organizer Mto2|Schizosaccharomyces pombe|ch... 26 4.1
SPCC70.06 |||nuclear export factor|Schizosaccharomyces pombe|chr... 26 5.4
SPAC1751.01c |gti1||gluconate transporter inducer Gti1|Schizosac... 25 7.1
SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces ... 25 9.4
>SPAC25B8.01 |dap1|SPAC26H5.15|cytochrome P450 regulator
Dap1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 166
Score = 85.4 bits (202), Expect = 6e-18
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 6/105 (5%)
Frame = +1
Query: 265 KDMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFS 444
+D T EL++Y+G++ V +A+ G +++VT G++FYGP GPY+ F G DA+RGLA S
Sbjct: 41 RDYTPAELKEYNGSKNS-LVFLAIKGTVYNVTMGSKFYGPQGPYSAFAGHDASRGLAKNS 99
Query: 445 VT---APEKD---YDDLSDLNSMEMGIMREWEEQFRENYDLVXRL 561
P+ D DD SDLN E + +W+ F + Y V RL
Sbjct: 100 FDDEFIPDSDAEELDDCSDLNDEERQALNDWKAFFDQKYQAVGRL 144
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 29.1 bits (62), Expect = 0.58
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = -1
Query: 252 SFFKGATFEQCVLYL**NLYSITNV 178
+FF+ AT +QC+L +L+S+TN+
Sbjct: 15 NFFRNATLDQCLLLFYLSLFSLTNL 39
>SPAC959.03c |||U3 snoRNP-associated protein
Utp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 520
Score = 28.3 bits (60), Expect = 1.0
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +1
Query: 223 LFKGCSLEKTTKLRKDMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGG 390
L + LE+T K R+D A + T+ L G+ FD TR R GG
Sbjct: 65 LLEAEGLERTYKFRQDQLAPNVALETATKSFSLDLDKFGGYSFDYTRDGRMILLGG 120
>SPAC4F10.10c |||mannosyltransferase complex subunit, Anp family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 337
Score = 27.9 bits (59), Expect = 1.3
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -2
Query: 626 RTCLLLRVLRPSSSWVLHQASESRXTRS*FSLNCSSHS 513
R LLL L+PS+SWVL S+ T S + + H+
Sbjct: 168 RNTLLLSTLKPSTSWVLWLDSDIVETPSTLIQDLAEHN 205
>SPBC1A4.06c |||mitochondrial matrix protein import
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +2
Query: 74 DSPPEVENVQAKHSGFFET--LKTLFCQPFIYFV 169
++P +VEN+ +K FF L L+ +P ++F+
Sbjct: 242 ENPRKVENIVSKQIAFFRKLYLPLLYAEPGVHFI 275
>SPBC902.06 |mto2||MT organizer Mto2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 397
Score = 26.2 bits (55), Expect = 4.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 386 PGP*NRFPLVTSNIHPFTAINTLPPSCVPSYCRS 285
P P P+ + H T +NT P S V + CRS
Sbjct: 198 PSPIILKPVEQAVNHAITLVNTSPSSVVDALCRS 231
>SPCC70.06 |||nuclear export factor|Schizosaccharomyces pombe|chr
3|||Manual
Length = 458
Score = 25.8 bits (54), Expect = 5.4
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = -2
Query: 248 FSREQPLNNVSYTCSKIYTVSQMYSQKQNK*TVDKTVFLRSQKSHCVWLAHFQPLVV 78
FSR+Q + +S + +YT+ Q+Y ++ +K HC A F+ +V
Sbjct: 203 FSRQQEIEQLSKSMEILYTLGQLYD------------YMHLRKEHCTHEAEFRAYMV 247
>SPAC1751.01c |gti1||gluconate transporter inducer
Gti1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 25.4 bits (53), Expect = 7.1
Identities = 32/117 (27%), Positives = 44/117 (37%)
Frame = -2
Query: 524 SSHSLMIPISIELRSLKSS*SFSGAVTENVASPLVASLPPKTAYGPPGP*NRFPLVTSNI 345
S+ S P S +KS F+ E V SP P T+ P + PLV+S
Sbjct: 150 SASSQQNPSSPGSNDIKSE--FAAVKNEYVLSPT----SPTTSAAFPSSFSSLPLVSSKP 203
Query: 344 HPFTAINTLPPSCVPSYCRSSTAVISFRNLVVFSREQPLNNVSYTCSKIYTVSQMYS 174
+ PPS PS S A S + + + ++S T S Y S S
Sbjct: 204 TGTPFVPKSPPSSSPSTTNVSNASTSSAPINPRAPQTRRESISSTSSIHYCSSSSLS 260
>SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1502
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -2
Query: 107 WLAHFQPLVVNPFYSR*KNVCAGTLSFCFYSILNL 3
W+ + P+++ FY + V AG SF S+L +
Sbjct: 239 WMNIWCPIILYEFYGNDRQVQAGMSSFLIPSLLGV 273
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,825,371
Number of Sequences: 5004
Number of extensions: 60388
Number of successful extensions: 225
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 224
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 291768710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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