Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0518.Seq
(648 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1047 + 33745656-33745964 95 4e-20
10_08_0543 - 18649894-18650233,18651446-18651981 93 2e-19
03_02_0826 + 11569961-11570301,11572220-11572454 91 9e-19
10_08_0544 - 18655186-18655567,18656835-18657151 89 3e-18
02_05_0089 - 25715637-25716333,25716481-25717238 89 3e-18
03_02_0079 + 5485090-5485238,5486066-5486137,5486764-5486840,548... 33 0.20
11_01_0618 - 4941906-4942118,4942231-4942343,4942534-4942651,494... 29 4.2
04_04_1273 - 32307273-32307569,32307659-32307791,32307874-323081... 29 4.2
03_01_0314 - 2477593-2480685 29 4.2
02_01_0325 - 2208480-2208674,2208772-2210609,2210980-2211109,221... 28 5.6
01_06_0011 - 25559099-25559238,25559781-25559814,25560172-255603... 28 5.6
12_01_0981 + 9931542-9931606,9931779-9933105 28 7.4
02_01_0451 - 3237849-3238061,3238142-3238268,3238418-3238656,323... 28 7.4
01_06_1827 + 40169001-40169263,40169358-40169472,40170090-401702... 28 7.4
08_01_0218 + 1743566-1745537,1746834-1747696,1748329-1748991 27 9.7
07_03_1445 + 26580293-26580610,26580814-26581314,26581411-265815... 27 9.7
06_01_0210 - 1596578-1596868,1598550-1598828,1600503-1600511,160... 27 9.7
01_05_0501 + 22764978-22765896,22766087-22766349,22766613-227668... 27 9.7
>02_05_1047 + 33745656-33745964
Length = 102
Score = 95.1 bits (226), Expect = 4e-20
Identities = 43/100 (43%), Positives = 64/100 (64%)
Frame = +1
Query: 268 DMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSV 447
++TA +LR YDG+ + ++V G ++DVT G FYGPGG YAVF GR+A+R L S
Sbjct: 4 ELTAAQLRAYDGSDPSKPIYVSVRGKVYDVTSGRGFYGPGGAYAVFAGREASRALGKMSK 63
Query: 448 TAPEKDYDDLSDLNSMEMGIMREWEEQFRENYDLVXRLSE 567
+ DLS L+ E+G++ +WE +F+ Y +V RL+E
Sbjct: 64 DDADVS-GDLSGLSDKELGVLADWETKFQAKYPVVARLTE 102
>10_08_0543 - 18649894-18650233,18651446-18651981
Length = 291
Score = 92.7 bits (220), Expect = 2e-19
Identities = 42/92 (45%), Positives = 62/92 (67%)
Frame = +1
Query: 268 DMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSV 447
++TA EL QYDG+ +LMA+ G I+DV++ FYGPGGPYA+F G+DA+R LA S
Sbjct: 146 EITAEELLQYDGSDPEKPLLMAIKGQIYDVSQSRLFYGPGGPYALFAGKDASRALAKMSF 205
Query: 448 TAPEKDYDDLSDLNSMEMGIMREWEEQFRENY 543
P+ DD+S L+ +E+ +++WE +F Y
Sbjct: 206 -EPQDLTDDISGLSLLELSALQDWEYKFSSKY 236
>03_02_0826 + 11569961-11570301,11572220-11572454
Length = 191
Score = 90.6 bits (215), Expect = 9e-19
Identities = 42/99 (42%), Positives = 61/99 (61%)
Frame = +1
Query: 268 DMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSV 447
++T +L YDG +L+A+ G ++DVTRG FYGP GPY++F GRDATR LA S
Sbjct: 81 EITLEQLAAYDGKDPAKPILIAIRGQVYDVTRGRLFYGPQGPYSLFAGRDATRALALMSF 140
Query: 448 TAPEKDYDDLSDLNSMEMGIMREWEEQFRENYDLVXRLS 564
P DL L E+ ++++WE++F+E Y V L+
Sbjct: 141 D-PIDLTGDLDGLGPDELEVLQDWEDKFKERYPTVGHLA 178
>10_08_0544 - 18655186-18655567,18656835-18657151
Length = 232
Score = 89.0 bits (211), Expect = 3e-18
Identities = 41/92 (44%), Positives = 59/92 (64%)
Frame = +1
Query: 268 DMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSV 447
+++ ELRQYDG+ +LMA+ G I+DVT+ FYGPGGPYA+F G+DA+R LA S
Sbjct: 73 EVSEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSF 132
Query: 448 TAPEKDYDDLSDLNSMEMGIMREWEEQFRENY 543
P+ D+S L E+ +++WE +F Y
Sbjct: 133 -EPQDLTGDISGLGPFELDALQDWEYKFMGKY 163
>02_05_0089 - 25715637-25716333,25716481-25717238
Length = 484
Score = 89.0 bits (211), Expect = 3e-18
Identities = 42/92 (45%), Positives = 57/92 (61%)
Frame = +1
Query: 268 DMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSV 447
++T ELR YDG+ +LMA+ G I+DVT+ FYGPGGPYA+F GRDA+R LA S
Sbjct: 220 EVTEEELRVYDGSDPNKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGRDASRALAKMSF 279
Query: 448 TAPEKDYDDLSDLNSMEMGIMREWEEQFRENY 543
+ D+S L +E+ + EWE +F Y
Sbjct: 280 ELDDLT-GDVSGLGPIELEALHEWEGKFMSKY 310
>03_02_0079 +
5485090-5485238,5486066-5486137,5486764-5486840,
5486946-5486989,5487583-5487639,5487640-5487686,
5488010-5488184,5489501-5489662,5489845-5489883
Length = 273
Score = 33.1 bits (72), Expect = 0.20
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 346 IFDVTRGNRFYGPGGPYAVFGG 411
+FDVT+G YGPGG Y F G
Sbjct: 52 VFDVTKGKSNYGPGGGYHHFAG 73
>11_01_0618 -
4941906-4942118,4942231-4942343,4942534-4942651,
4942762-4942881,4942964-4943101,4943392-4943517,
4943659-4943847,4943951-4944238,4944344-4944374,
4945014-4945216
Length = 512
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 125 ETLKTLFCQPFIYFVFVSTFVILYKFYYKYKTHCSKVAPL 244
E +K + FVF S +L +FY + HC K+AP+
Sbjct: 384 EPVKVVVADNVHDFVFKSGKNVLVEFYAPWCGHCKKLAPI 423
>04_04_1273 -
32307273-32307569,32307659-32307791,32307874-32308105,
32308220-32308436,32308594-32308718,32309416-32310757
Length = 781
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +2
Query: 458 KRTMMT*VISTLWKWES*GNG-RNNLERIMIWSVDFLRPGEEPRNYSDEEPEEADTSALP 634
+RT+ T + L W G G + R W+ F E NYSD+ P + +SA
Sbjct: 196 RRTLATDGLPELVLWRGGGGGGATKVYRTGPWNGRFFNGVPEASNYSDKFPLQVTSSARE 255
Query: 635 TT 640
T
Sbjct: 256 VT 257
>03_01_0314 - 2477593-2480685
Length = 1030
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +3
Query: 312 GWQSVDGCEWVDIRCD*RESV 374
GW S C W +RCD R +V
Sbjct: 50 GWSSAPHCTWKGVRCDARGAV 70
>02_01_0325 -
2208480-2208674,2208772-2210609,2210980-2211109,
2211231-2211270,2211409-2211531,2211940-2212030,
2212396-2212480,2212565-2212720,2212797-2212853,
2212940-2213110,2213313-2213330,2213479-2213551,
2213754-2213839,2214348-2214466,2214542-2214641
Length = 1093
Score = 28.3 bits (60), Expect = 5.6
Identities = 28/79 (35%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Frame = -2
Query: 449 VTENVASPLVASLPPKTAYGPPGP*NRFPLVTSNIHPFTAINT--LPPSCVPSYCRSSTA 276
VTE + S S P TA G N F T N H INT LPPS P +S
Sbjct: 783 VTEEMPS---CSTSPSTANG-----NHFTQSTKNRH---CINTERLPPSTAPMLIPTSID 831
Query: 275 VISFRNLVVFSREQPLNNV 219
++ L+ +P NNV
Sbjct: 832 AVTATPLMTKELPKPNNNV 850
>01_06_0011 -
25559099-25559238,25559781-25559814,25560172-25560333,
25560335-25560454
Length = 151
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 318 QSVDGCEWVDIRCD 359
Q VD C W D+RCD
Sbjct: 129 QDVDPCNWKDVRCD 142
>12_01_0981 + 9931542-9931606,9931779-9933105
Length = 463
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/66 (27%), Positives = 26/66 (39%)
Frame = -2
Query: 491 ELRSLKSS*SFSGAVTENVASPLVASLPPKTAYGPPGP*NRFPLVTSNIHPFTAINTLPP 312
+L+S K + EN+ + SL PP P N P N F +T+PP
Sbjct: 15 KLKSTKMRNMSNSPNQENIEMTMTPSLVTTLPLPPPPP-NHIPTTERNTSVFFNTSTIPP 73
Query: 311 SCVPSY 294
P +
Sbjct: 74 PPPPHF 79
>02_01_0451 - 3237849-3238061,3238142-3238268,3238418-3238656,
3238937-3239151,3239569-3240031,3240562-3240715,
3241724-3241833,3242540-3242797,3242843-3242854,
3243492-3243545,3244202-3244312,3244390-3244545,
3244798-3245201,3245405-3245501,3246041-3246050,
3246097-3246164,3246652-3246762,3246874-3247074,
3247384-3247485,3247980-3248087,3248209-3248411,
3248563-3248680,3248774-3248854,3248958-3249500,
3249602-3249730
Length = 1428
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = +1
Query: 388 GPYAVFGGRDATRGLATFS--VTAPEKDYDDLSDLNSMEMGIMREWEEQFRENYDLVXRL 561
G Y GR RGL + + + SDL ++ +G E QFR Y ++ L
Sbjct: 856 GEYIQMAGRAGRRGLDNIGTVIVMCRDEIPEESDLKNLIVGKPTRLESQFRLTYTMILHL 915
>01_06_1827 +
40169001-40169263,40169358-40169472,40170090-40170201,
40170556-40170623,40170798-40170852,40170948-40171027,
40171811-40171924,40172178-40172296,40173064-40173181,
40173264-40173394,40173535-40173688,40173922-40174017
Length = 474
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = -2
Query: 410 PPKTAYGPPGP*NRFPLVTSNIHPFTAINTLPPSCVPSYCRSSTAVI 270
PP A PP P P+V TA TLPP P+ S++ +
Sbjct: 35 PPPPAPPPPPPPRLEPVVVVAPSTTTATATLPPIITPTLSPSTSTCL 81
>08_01_0218 + 1743566-1745537,1746834-1747696,1748329-1748991
Length = 1165
Score = 27.5 bits (58), Expect = 9.7
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 54 FLPRIKWIHHQRLKMCKPNTVAF 122
+L ++W + CKPNT+AF
Sbjct: 405 YLSAVRWFCRMSQEGCKPNTIAF 427
>07_03_1445 +
26580293-26580610,26580814-26581314,26581411-26581508,
26581900-26581978,26582065-26582325,26582409-26582576,
26582800-26583237
Length = 620
Score = 27.5 bits (58), Expect = 9.7
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +1
Query: 409 GRDATRGLATFSVT---APEKDYDDLSDLNSMEMGIMREWEEQFRENYDLVXRLSEA 570
G++ T A F V A E + + LNS ++ M+E E F +++L RLSE+
Sbjct: 446 GKEVTGNSARFPVVDILASEDIVTETAVLNSFDLATMKENEMDFTSSFEL--RLSES 500
>06_01_0210 -
1596578-1596868,1598550-1598828,1600503-1600511,
1600713-1600781
Length = 215
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 340 HSQPSTLCHPPVSRR 296
HS PS L HPPV R
Sbjct: 128 HSDPSNLAHPPVEHR 142
>01_05_0501 +
22764978-22765896,22766087-22766349,22766613-22766836,
22767419-22767749,22767968-22768372
Length = 713
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -2
Query: 410 PPKTAYGPPGP*NRFPLVTSNIHPFTAINTLPPSCVP 300
PP PP P VTS++ P++ ++LPPS P
Sbjct: 80 PPPPPPPPPVPVPPAYSVTSSVPPYSMTSSLPPSPRP 116
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,398,748
Number of Sequences: 37544
Number of extensions: 398997
Number of successful extensions: 1220
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1215
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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