Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0515.Seq
         (449 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    27   0.31 
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   6.6  
AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.         22   8.7  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    22   8.7  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    22   8.7  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 27.1 bits (57), Expect = 0.31
 Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
 Frame = +3

Query: 231 SVFGEGGDH-QHHHFWT*A--NFHH*QIDARVTKHPLQHHH 344
           S +G GG H  HHH    A    HH Q  A    H LQ  H
Sbjct: 700 SPYGGGGHHLSHHHGGAAAATGHHHHQHHAAPHHHSLQQQH 740


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +3

Query: 240 GEGGDHQHHH 269
           G GG H HHH
Sbjct: 428 GGGGRHHHHH 437


>AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.
          Length = 304

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 300 QIDARVTKHPLQHHHLRALNPMLVW*SSR 386
           +I   + +H   HHHL  L  + ++ SSR
Sbjct: 82  KIRVHIFEHAANHHHLAHLARVGLYGSSR 110


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -3

Query: 315 PAHLSVSDGNSLRSRSGGVDGHHLHQKLNGSCCQR 211
           P HL + DG SL    G    H+      GSC ++
Sbjct: 819 PGHLKLWDGYSLLYVDGNDYPHNQDLGSAGSCVRK 853


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 22  TFGGALSPGXNSTAMXGGAPP 84
           T GG+   G  S++  GG PP
Sbjct: 238 TEGGSSQGGGGSSSKKGGPPP 258


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 447,918
Number of Sequences: 2352
Number of extensions: 8029
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)