Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0515.Seq
         (449 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC011826-1|AAH11826.1|  540|Homo sapiens CCR4-NOT transcription ...    56   6e-08
BC002597-1|AAH02597.1|  540|Homo sapiens CCR4-NOT transcription ...    56   6e-08
AF180473-1|AAF29827.1|  540|Homo sapiens Not2p protein.                56   6e-08
AF044215-1|AAQ13426.1|  378|Homo sapiens unknown protein.              56   6e-08
U30246-1|AAC50561.1| 1212|Homo sapiens bumetanide-sensitive Na-K...    29   9.7  
BC033003-1|AAH33003.1| 1150|Homo sapiens SLC12A2 protein protein.      29   9.7  
AY280459-1|AAP33906.1| 1212|Homo sapiens bumetanide-sensitive Na...    29   9.7  

>BC011826-1|AAH11826.1|  540|Homo sapiens CCR4-NOT transcription
           complex, subunit 2 protein.
          Length = 540

 Score = 56.0 bits (129), Expect = 6e-08
 Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
 Frame = +2

Query: 272 LDLSEFPSLTDRCAGD---QXXXXXXXXXGSKPYVGMVKQPTSEQSE-FTMSSEDFPALP 439
           LDLS+FP+L DR   +             G  PYVGMV +P +EQS+ F++ +EDFPALP
Sbjct: 225 LDLSDFPALADRNRREGSGNPTPLINPLAGRAPYVGMVTKPANEQSQDFSIHNEDFPALP 284

Query: 440 GTS 448
           G+S
Sbjct: 285 GSS 287


>BC002597-1|AAH02597.1|  540|Homo sapiens CCR4-NOT transcription
           complex, subunit 2 protein.
          Length = 540

 Score = 56.0 bits (129), Expect = 6e-08
 Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
 Frame = +2

Query: 272 LDLSEFPSLTDRCAGD---QXXXXXXXXXGSKPYVGMVKQPTSEQSE-FTMSSEDFPALP 439
           LDLS+FP+L DR   +             G  PYVGMV +P +EQS+ F++ +EDFPALP
Sbjct: 225 LDLSDFPALADRNRREGSGNPTPLINPLAGRAPYVGMVTKPANEQSQDFSIHNEDFPALP 284

Query: 440 GTS 448
           G+S
Sbjct: 285 GSS 287


>AF180473-1|AAF29827.1|  540|Homo sapiens Not2p protein.
          Length = 540

 Score = 56.0 bits (129), Expect = 6e-08
 Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
 Frame = +2

Query: 272 LDLSEFPSLTDRCAGD---QXXXXXXXXXGSKPYVGMVKQPTSEQSE-FTMSSEDFPALP 439
           LDLS+FP+L DR   +             G  PYVGMV +P +EQS+ F++ +EDFPALP
Sbjct: 225 LDLSDFPALADRNRREGSGNPTPLINPLAGRAPYVGMVTKPANEQSQDFSIHNEDFPALP 284

Query: 440 GTS 448
           G+S
Sbjct: 285 GSS 287


>AF044215-1|AAQ13426.1|  378|Homo sapiens unknown protein.
          Length = 378

 Score = 56.0 bits (129), Expect = 6e-08
 Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
 Frame = +2

Query: 272 LDLSEFPSLTDRCAGD---QXXXXXXXXXGSKPYVGMVKQPTSEQSE-FTMSSEDFPALP 439
           LDLS+FP+L DR   +             G  PYVGMV +P +EQS+ F++ +EDFPALP
Sbjct: 226 LDLSDFPALADRNRREGSGNPTPLINPLAGRAPYVGMVTKPANEQSQDFSIHNEDFPALP 285

Query: 440 GTS 448
           G+S
Sbjct: 286 GSS 288


>U30246-1|AAC50561.1| 1212|Homo sapiens bumetanide-sensitive Na-K-Cl
           cotransporter protein.
          Length = 1212

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 300 VSDGNSLRSRSGGVDGHHLH 241
           +S+G+SL S  GG  GHH H
Sbjct: 179 LSEGSSLHSGGGGGSGHHQH 198


>BC033003-1|AAH33003.1| 1150|Homo sapiens SLC12A2 protein protein.
          Length = 1150

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 300 VSDGNSLRSRSGGVDGHHLH 241
           +S+G+SL S  GG  GHH H
Sbjct: 179 LSEGSSLHSGGGGGSGHHQH 198


>AY280459-1|AAP33906.1| 1212|Homo sapiens bumetanide-sensitive
           Na-K-Cl cotransporter protein.
          Length = 1212

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 300 VSDGNSLRSRSGGVDGHHLH 241
           +S+G+SL S  GG  GHH H
Sbjct: 179 LSEGSSLHSGGGGGSGHHQH 198


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,924,243
Number of Sequences: 237096
Number of extensions: 1143174
Number of successful extensions: 6451
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6442
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3701294870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)