Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0513.Seq
(299 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110501-9|CAB54507.2| 802|Caenorhabditis elegans Hypothetical ... 69 8e-13
AL033514-40|CAD36501.1| 802|Caenorhabditis elegans Hypothetical... 69 8e-13
AJ319870-1|CAC67459.1| 802|Caenorhabditis elegans ZYG-8 protein... 69 8e-13
Z35663-12|CAA84736.2| 718|Caenorhabditis elegans Hypothetical p... 30 0.35
Z74035-4|CAA98483.1| 373|Caenorhabditis elegans Hypothetical pr... 28 1.4
Z83230-1|CAB05741.1| 1049|Caenorhabditis elegans Hypothetical pr... 27 2.5
EF584655-1|ABQ57413.1| 1187|Caenorhabditis elegans LAD-2 long is... 27 2.5
AF456361-1|AAL60232.1| 1187|Caenorhabditis elegans immunoglobuli... 27 2.5
AF036694-4|AAB88342.1| 234|Caenorhabditis elegans Hypothetical ... 27 2.5
AC024817-49|AAF59572.3| 1187|Caenorhabditis elegans L1 cam adhes... 27 2.5
Z81100-1|CAB03194.1| 331|Caenorhabditis elegans Hypothetical pr... 27 3.3
AL034489-5|CAA22467.1| 383|Caenorhabditis elegans Hypothetical ... 26 4.4
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 26 5.8
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 26 5.8
Z99282-1|CAB16532.1| 1037|Caenorhabditis elegans Hypothetical pr... 25 7.6
Z83223-6|CAB05719.1| 884|Caenorhabditis elegans Hypothetical pr... 25 7.6
Z81538-6|CAB04387.1| 884|Caenorhabditis elegans Hypothetical pr... 25 7.6
>AL110501-9|CAB54507.2| 802|Caenorhabditis elegans Hypothetical
protein Y79H2A.11 protein.
Length = 802
Score = 68.5 bits (160), Expect = 8e-13
Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Frame = +1
Query: 25 QVCRLLLNKRNSPTLEHALAAITDCVKLDTGCVRKVFTSSGTQVTALHQFFDEEDVFFAY 204
++ R LLNK+ + + + L +T VKLD+G +RK+FT SG V +L FF ++DVF AY
Sbjct: 353 RISRHLLNKKTARSFDQVLRDLTFVVKLDSGAIRKLFTLSGRPVLSLQDFFRDDDVFVAY 412
Query: 205 -GNERVNQEDFELEFEEKK 258
GNE++ +D + EE K
Sbjct: 413 GGNEKMAADDLLVASEEHK 431
>AL033514-40|CAD36501.1| 802|Caenorhabditis elegans Hypothetical
protein Y79H2A.11 protein.
Length = 802
Score = 68.5 bits (160), Expect = 8e-13
Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Frame = +1
Query: 25 QVCRLLLNKRNSPTLEHALAAITDCVKLDTGCVRKVFTSSGTQVTALHQFFDEEDVFFAY 204
++ R LLNK+ + + + L +T VKLD+G +RK+FT SG V +L FF ++DVF AY
Sbjct: 353 RISRHLLNKKTARSFDQVLRDLTFVVKLDSGAIRKLFTLSGRPVLSLQDFFRDDDVFVAY 412
Query: 205 -GNERVNQEDFELEFEEKK 258
GNE++ +D + EE K
Sbjct: 413 GGNEKMAADDLLVASEEHK 431
>AJ319870-1|CAC67459.1| 802|Caenorhabditis elegans ZYG-8 protein
protein.
Length = 802
Score = 68.5 bits (160), Expect = 8e-13
Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Frame = +1
Query: 25 QVCRLLLNKRNSPTLEHALAAITDCVKLDTGCVRKVFTSSGTQVTALHQFFDEEDVFFAY 204
++ R LLNK+ + + + L +T VKLD+G +RK+FT SG V +L FF ++DVF AY
Sbjct: 353 RISRHLLNKKTARSFDQVLRDLTFVVKLDSGAIRKLFTLSGRPVLSLQDFFRDDDVFVAY 412
Query: 205 -GNERVNQEDFELEFEEKK 258
GNE++ +D + EE K
Sbjct: 413 GGNEKMAADDLLVASEEHK 431
>Z35663-12|CAA84736.2| 718|Caenorhabditis elegans Hypothetical
protein T04A8.15 protein.
Length = 718
Score = 29.9 bits (64), Expect = 0.35
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +1
Query: 172 FFDEEDVFFAYGNERVNQEDFELEFEEKKPYPSAEKLP 285
+F +D FF +G N ED + E KP+ S P
Sbjct: 379 YFTSDDPFFGFGKAVENVEDDAEQIMEDKPHESVHSTP 416
>Z74035-4|CAA98483.1| 373|Caenorhabditis elegans Hypothetical
protein F47G9.6 protein.
Length = 373
Score = 27.9 bits (59), Expect = 1.4
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -3
Query: 186 FLVEELMQSCNLSPRRCENFPYTSRIEFHAIRDRSQGMLE 67
F +E ++ N S C+NFP R +H I + E
Sbjct: 71 FTMEMFLKDLNCSVDSCQNFPQKVRAVYHVIDREGRSKFE 110
>Z83230-1|CAB05741.1| 1049|Caenorhabditis elegans Hypothetical protein
F56A8.1 protein.
Length = 1049
Score = 27.1 bits (57), Expect = 2.5
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +1
Query: 166 HQFFDEEDVFF-AYGNERVNQ--EDFELEFEEKKPYPSAEKLPLQEV 297
H+F ++ + FF +Y +RV + E E++ +EKK + +K P E+
Sbjct: 1003 HEFIEKNEKFFNSYDKDRVKEDLEAEEMKRKEKKSNKAEKKQPKGEL 1049
>EF584655-1|ABQ57413.1| 1187|Caenorhabditis elegans LAD-2 long
isoform protein.
Length = 1187
Score = 27.1 bits (57), Expect = 2.5
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -3
Query: 114 RIEFHAIRDRSQGMLECRAIT 52
R+ F ++R R G+++C AIT
Sbjct: 575 RLRFRSVRGRHSGIIDCAAIT 595
>AF456361-1|AAL60232.1| 1187|Caenorhabditis elegans immunoglobulin
domain-containingprotein Y54G2A.25 protein.
Length = 1187
Score = 27.1 bits (57), Expect = 2.5
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -3
Query: 114 RIEFHAIRDRSQGMLECRAIT 52
R+ F ++R R G+++C AIT
Sbjct: 575 RLRFRSVRGRHSGIIDCAAIT 595
>AF036694-4|AAB88342.1| 234|Caenorhabditis elegans Hypothetical
protein CD4.4 protein.
Length = 234
Score = 27.1 bits (57), Expect = 2.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +1
Query: 136 TSSGTQVTALHQFFDEEDVFFAYGNERVNQEDFELEFEEKKPYPSAEKL 282
TSS QV A D E +F + N ++ E F +F++KK K+
Sbjct: 118 TSSLMQVAAQEADDDAEALFTQFENGEISVEIFLKQFKDKKTIAHLRKI 166
>AC024817-49|AAF59572.3| 1187|Caenorhabditis elegans L1 cam adhesion
molecule homologprotein 2, isoform a protein.
Length = 1187
Score = 27.1 bits (57), Expect = 2.5
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -3
Query: 114 RIEFHAIRDRSQGMLECRAIT 52
R+ F ++R R G+++C AIT
Sbjct: 575 RLRFRSVRGRHSGIIDCAAIT 595
>Z81100-1|CAB03194.1| 331|Caenorhabditis elegans Hypothetical
protein K08G2.7 protein.
Length = 331
Score = 26.6 bits (56), Expect = 3.3
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 25 QVCRLLLNKRNSPTLEHALAAITDCVKLDTGCVRKVFTSSGTQVTA 162
Q+ +L NKRN + + C+K C R +F SS TQ A
Sbjct: 274 QLSYILCNKRNMSSFLKLFKSDVTCLKFYCPCCR-IFKSSRTQPEA 318
>AL034489-5|CAA22467.1| 383|Caenorhabditis elegans Hypothetical
protein Y7A5A.7 protein.
Length = 383
Score = 26.2 bits (55), Expect = 4.4
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = +1
Query: 52 RNSPTLEHALAAITDCVKLDTGCVRKVFT----SSGTQVTALHQFFDEEDVFFAYGNE 213
R PT A+I DC+ T +K T T AL++ +E+ V F NE
Sbjct: 212 REEPTTSEQSASIKDCILKSTRSYQKQATKDIEDKRTIFNALYKKCEEDQVAFRIQNE 269
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +1
Query: 130 VFTSSGTQVTALHQFFDEEDVFFAYGNERVNQ--EDFEL 240
+FT T++T L+ D ED++ N Q +DF++
Sbjct: 1872 IFTLDNTRLTILNANRDHEDIYTCVANNTAGQVSKDFDV 1910
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +1
Query: 130 VFTSSGTQVTALHQFFDEEDVFFAYGNERVNQ--EDFEL 240
+FT T++T L+ D ED++ N Q +DF++
Sbjct: 1872 IFTLDNTRLTILNANRDHEDIYTCVANNTAGQVSKDFDV 1910
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +1
Query: 130 VFTSSGTQVTALHQFFDEEDVFFAYGNERVNQ--EDFEL 240
+FT T++T L+ D ED++ N Q +DF++
Sbjct: 1872 IFTLDNTRLTILNANRDHEDIYTCVANNTAGQVSKDFDV 1910
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +1
Query: 130 VFTSSGTQVTALHQFFDEEDVFFAYGNERVNQ--EDFEL 240
+FT T++T L+ D ED++ N Q +DF++
Sbjct: 1872 IFTLDNTRLTILNANRDHEDIYTCVANNTAGQVSKDFDV 1910
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +1
Query: 130 VFTSSGTQVTALHQFFDEEDVFFAYGNERVNQ--EDFEL 240
+FT T++T L+ D ED++ N Q +DF++
Sbjct: 1872 IFTLDNTRLTILNANRDHEDIYTCVANNTAGQVSKDFDV 1910
>Z99282-1|CAB16532.1| 1037|Caenorhabditis elegans Hypothetical
protein Y70C5A.2 protein.
Length = 1037
Score = 25.4 bits (53), Expect = 7.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 34 RLLLNKRNSPTLEHALAAITDCVKLDTGCVRKV 132
R+L N H + AI D +LDT CV ++
Sbjct: 275 RILRVYNNCVPKSHRVGAIVDADRLDTHCVPQI 307
>Z83223-6|CAB05719.1| 884|Caenorhabditis elegans Hypothetical
protein E01G4.6 protein.
Length = 884
Score = 25.4 bits (53), Expect = 7.6
Identities = 18/72 (25%), Positives = 30/72 (41%)
Frame = +1
Query: 76 ALAAITDCVKLDTGCVRKVFTSSGTQVTALHQFFDEEDVFFAYGNERVNQEDFELEFEEK 255
A+ I+D +K + T V ++E V ++V +ED + EEK
Sbjct: 440 AVFTISDSLKHKKAEAKLAHTIVSRNVVEAENAIEKEVVEPKAEEKKVKEEDVKAVAEEK 499
Query: 256 KPYPSAEKLPLQ 291
K KLP++
Sbjct: 500 KEEKKPGKLPMK 511
>Z81538-6|CAB04387.1| 884|Caenorhabditis elegans Hypothetical
protein E01G4.6 protein.
Length = 884
Score = 25.4 bits (53), Expect = 7.6
Identities = 18/72 (25%), Positives = 30/72 (41%)
Frame = +1
Query: 76 ALAAITDCVKLDTGCVRKVFTSSGTQVTALHQFFDEEDVFFAYGNERVNQEDFELEFEEK 255
A+ I+D +K + T V ++E V ++V +ED + EEK
Sbjct: 440 AVFTISDSLKHKKAEAKLAHTIVSRNVVEAENAIEKEVVEPKAEEKKVKEEDVKAVAEEK 499
Query: 256 KPYPSAEKLPLQ 291
K KLP++
Sbjct: 500 KEEKKPGKLPMK 511
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,701,647
Number of Sequences: 27780
Number of extensions: 123349
Number of successful extensions: 369
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 369
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 313072342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -