Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0512.Seq
         (698 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IPJ1 Cluster: CG17377-PC, isoform C; n=6; melanogaste...    42   0.011
UniRef50_UPI0000D9D3FA Cluster: PREDICTED: hypothetical protein;...    34   3.9  
UniRef50_Q5CT42 Cluster: Signal peptide, predicted secreted prot...    33   5.1  

>UniRef50_Q8IPJ1 Cluster: CG17377-PC, isoform C; n=6; melanogaster
           subgroup|Rep: CG17377-PC, isoform C - Drosophila
           melanogaster (Fruit fly)
          Length = 287

 Score = 42.3 bits (95), Expect = 0.011
 Identities = 21/47 (44%), Positives = 26/47 (55%)
 Frame = +2

Query: 509 KSRELRGGIMYYSCHCIKRNGLAARLSANRLQR*ADCLHXRTPYAHP 649
           +SRELR GIMY +C C+KRNGL  +   +  Q    CL    P   P
Sbjct: 14  RSRELRCGIMYTTCDCVKRNGLQDKCPRSACQGRPACLCFPFPTCGP 60


>UniRef50_UPI0000D9D3FA Cluster: PREDICTED: hypothetical protein;
           n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
           - Macaca mulatta
          Length = 99

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = +2

Query: 425 KKVGRWKQRRAGGWLQKKG*KRKSVKENKSRELR 526
           K++G W+QR+ GG  QK G +R SV +    E R
Sbjct: 64  KELGSWRQRKTGGQRQKLGSERGSVHQGTPEEWR 97


>UniRef50_Q5CT42 Cluster: Signal peptide, predicted secreted protein
           with a cysteine cluster at the C-terminus; n=2;
           Cryptosporidium|Rep: Signal peptide, predicted secreted
           protein with a cysteine cluster at the C-terminus -
           Cryptosporidium parvum Iowa II
          Length = 690

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 17/60 (28%), Positives = 27/60 (45%)
 Frame = +3

Query: 441 GNSGGQEGGSKKKDENENQLKRTKAVNCEVGLCITAATASSVTGLQHDCRRTGCSGEPTA 620
           GN+  + G +KK++ N N+  R   VN +  +C T  +         D R  G S   T+
Sbjct: 270 GNNNAENGANKKRNRNRNRKNRDGNVNSKENICQTPHSNIQPNQQDEDGRFEGASSSNTS 329


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,011,524
Number of Sequences: 1657284
Number of extensions: 13354989
Number of successful extensions: 35099
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 33247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35001
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)