Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0511.Seq
         (694 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0835 + 8147177-8147359,8147871-8147968,8148045-8148102,814...    75   5e-14
04_04_1075 + 30634141-30634320,30634917-30635014,30635113-306351...    75   5e-14
08_02_1442 + 27120604-27120890,27121029-27121166,27121280-271213...    48   5e-06
10_06_0101 + 10736987-10737100,10737263-10737301,10737397-107374...    31   1.1  

>08_01_0835 +
           8147177-8147359,8147871-8147968,8148045-8148102,
           8148192-8148271,8148770-8148872,8148966-8149181
          Length = 245

 Score = 74.9 bits (176), Expect = 5e-14
 Identities = 32/45 (71%), Positives = 40/45 (88%)
 Frame = +3

Query: 372 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLK 506
           + RK+LQL RLRQI NGVF+++NKAT+NMLR  EPY+A+GYPNLK
Sbjct: 101 KTRKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLK 145



 Score = 55.2 bits (127), Expect = 5e-08
 Identities = 25/49 (51%), Positives = 35/49 (71%)
 Frame = +1

Query: 253 QERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCL 399
           QE++ ++L R+AR +G +YV  EAKL FV+RIRGIN + PK+ K    L
Sbjct: 61  QEKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTRKILQLL 109



 Score = 51.2 bits (117), Expect = 8e-07
 Identities = 20/35 (57%), Positives = 28/35 (80%)
 Frame = +2

Query: 488 GIPQLKEVRELVYKRGFAKLSGQRIPITSNSIVEK 592
           G P LK VREL+YKRG+ KL+ QRIP+ +N ++E+
Sbjct: 140 GYPNLKSVRELIYKRGYGKLNKQRIPLQNNKVIEE 174



 Score = 36.3 bits (80), Expect = 0.023
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = +2

Query: 92  KLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEY 247
           K   VPESVLK             +  L  +  A++ ++ IF RA+QY +EY
Sbjct: 7   KAAVVPESVLKKRKREEQWAADRKEKALAEKKKAVESRKLIFARAKQYAQEY 58



 Score = 33.5 bits (73), Expect = 0.16
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = +1

Query: 589 EEGSINTTFICVEDLIHEIFTVG 657
           EEG      IC+EDL+HEI TVG
Sbjct: 173 EEGLGKHDIICIEDLVHEIMTVG 195


>04_04_1075 +
           30634141-30634320,30634917-30635014,30635113-30635170,
           30635259-30635338,30635686-30635788,30635847-30636080
          Length = 250

 Score = 74.9 bits (176), Expect = 5e-14
 Identities = 32/45 (71%), Positives = 40/45 (88%)
 Frame = +3

Query: 372 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLK 506
           + RK+LQL RLRQI NGVF+++NKAT+NMLR  EPY+A+GYPNLK
Sbjct: 100 KTRKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLK 144



 Score = 53.6 bits (123), Expect = 1e-07
 Identities = 21/35 (60%), Positives = 29/35 (82%)
 Frame = +2

Query: 488 GIPQLKEVRELVYKRGFAKLSGQRIPITSNSIVEK 592
           G P LK VREL+YKRG+ KL+ QRIP+T+N ++E+
Sbjct: 139 GYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEE 173



 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 24/49 (48%), Positives = 34/49 (69%)
 Frame = +1

Query: 253 QERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCL 399
           QE++ ++L R+AR +G +YV  E KL FV+RIRGIN + PK+ K    L
Sbjct: 60  QEKELVQLKREARMKGGFYVSPEEKLLFVVRIRGINAMHPKTRKILQLL 108



 Score = 32.3 bits (70), Expect = 0.38
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +2

Query: 104 VPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEY 247
           VPESVL+             +  +  +  +I+ ++ IF RA+QY +EY
Sbjct: 10  VPESVLRKRKREEVWAAASKEKAVAEKKKSIESRKLIFSRAKQYAEEY 57



 Score = 31.5 bits (68), Expect = 0.66
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +1

Query: 583 C*EEGSINTTFICVEDLIHEIFTVG 657
           C  +G      IC+EDL+HEI TVG
Sbjct: 176 CLYQGLGKHDIICIEDLVHEIMTVG 200


>08_02_1442 +
           27120604-27120890,27121029-27121166,27121280-27121382,
           27121877-27122036,27122927-27123114,27123203-27124770,
           27124882-27125869,27126595-27127098,27127347-27127433,
           27127753-27127821,27128012-27128041
          Length = 1373

 Score = 48.4 bits (110), Expect = 5e-06
 Identities = 19/44 (43%), Positives = 31/44 (70%)
 Frame = +3

Query: 375 VRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLK 506
           +R++L+  RL Q+  GVF++   AT+  L + EP+I +G+PNLK
Sbjct: 104 MRRILRKLRLTQVLTGVFLKATDATMKRLLVVEPFITYGFPNLK 147



 Score = 41.1 bits (92), Expect = 8e-04
 Identities = 16/35 (45%), Positives = 24/35 (68%)
 Frame = +2

Query: 488 GIPQLKEVRELVYKRGFAKLSGQRIPITSNSIVEK 592
           G P LK V++L+YK+G   L  +  P+TSN ++EK
Sbjct: 142 GFPNLKNVKDLIYKKGRGFLDKEPFPLTSNDLIEK 176


>10_06_0101 +
           10736987-10737100,10737263-10737301,10737397-10737474,
           10737539-10737685,10737781-10737888,10738115-10738449,
           10738572-10739544,10739702-10739980
          Length = 690

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 15/35 (42%), Positives = 24/35 (68%)
 Frame = +2

Query: 170 TLKRRSSAIKKKREIFKRAEQYVKEYRIRNVMKSD 274
           TL+ R+  IK KRE+F+R     KE+RI+ +++ D
Sbjct: 149 TLETRTDPIKLKREVFRRKR---KEHRIQELLQVD 180


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,526,939
Number of Sequences: 37544
Number of extensions: 358090
Number of successful extensions: 768
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)