Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0511.Seq
(694 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g44120.2 68415.m05488 60S ribosomal protein L7 (RPL7C) 73 2e-13
At2g44120.1 68415.m05487 60S ribosomal protein L7 (RPL7C) 73 2e-13
At3g13580.3 68416.m01710 60S ribosomal protein L7 (RPL7D) simila... 72 3e-13
At3g13580.2 68416.m01709 60S ribosomal protein L7 (RPL7D) simila... 72 3e-13
At3g13580.1 68416.m01708 60S ribosomal protein L7 (RPL7D) simila... 72 3e-13
At2g01250.1 68415.m00037 60S ribosomal protein L7 (RPL7B) 70 2e-12
At1g80750.1 68414.m09474 60S ribosomal protein L7 (RPL7A) simila... 43 2e-04
At3g47460.1 68416.m05161 SMC2-like condensin, putative similar t... 28 6.8
At1g56420.1 68414.m06489 expressed protein ; expression supporte... 28 6.8
At5g62410.1 68418.m07832 SMC2-like condensin, putative (SMC2) (T... 27 8.9
At5g06740.1 68418.m00762 lectin protein kinase family protein co... 27 8.9
At3g59970.3 68416.m06695 methylenetetrahydrofolate reductase 1 (... 27 8.9
At1g26540.1 68414.m03234 agenet domain-containing protein contai... 27 8.9
>At2g44120.2 68415.m05488 60S ribosomal protein L7 (RPL7C)
Length = 247
Score = 72.5 bits (170), Expect = 2e-13
Identities = 31/45 (68%), Positives = 39/45 (86%)
Frame = +3
Query: 372 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLK 506
+ +K+LQL RLRQI NGVF+++NKATVNMLR EPY+ +GYPNLK
Sbjct: 103 KTKKILQLLRLRQIFNGVFLKVNKATVNMLRRVEPYVTYGYPNLK 147
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/49 (48%), Positives = 34/49 (69%)
Frame = +1
Query: 253 QERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCL 399
++ + IRL R+A+ +G +YV EAKL F+IRIRGIN + PK+ K L
Sbjct: 63 KDNELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL 111
Score = 50.0 bits (114), Expect = 1e-06
Identities = 21/35 (60%), Positives = 28/35 (80%)
Frame = +2
Query: 488 GIPQLKEVRELVYKRGFAKLSGQRIPITSNSIVEK 592
G P LK V+EL+YKRG+ KL+ QRI +T NSIV++
Sbjct: 142 GYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQ 176
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 104 VPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEY 247
VPESVLK + + +++ ++ IFKRAEQY KEY
Sbjct: 13 VPESVLKKIKRQEEWALAKKDEAVAAKKKSVEARKLIFKRAEQYAKEY 60
Score = 31.5 bits (68), Expect = 0.55
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1
Query: 616 ICVEDLIHEIFTVG 657
ICVEDLIHEI TVG
Sbjct: 184 ICVEDLIHEIMTVG 197
>At2g44120.1 68415.m05487 60S ribosomal protein L7 (RPL7C)
Length = 242
Score = 72.5 bits (170), Expect = 2e-13
Identities = 31/45 (68%), Positives = 39/45 (86%)
Frame = +3
Query: 372 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLK 506
+ +K+LQL RLRQI NGVF+++NKATVNMLR EPY+ +GYPNLK
Sbjct: 98 KTKKILQLLRLRQIFNGVFLKVNKATVNMLRRVEPYVTYGYPNLK 142
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/49 (48%), Positives = 34/49 (69%)
Frame = +1
Query: 253 QERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCL 399
++ + IRL R+A+ +G +YV EAKL F+IRIRGIN + PK+ K L
Sbjct: 58 KDNELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL 106
Score = 50.0 bits (114), Expect = 1e-06
Identities = 21/35 (60%), Positives = 28/35 (80%)
Frame = +2
Query: 488 GIPQLKEVRELVYKRGFAKLSGQRIPITSNSIVEK 592
G P LK V+EL+YKRG+ KL+ QRI +T NSIV++
Sbjct: 137 GYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQ 171
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 104 VPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEY 247
VPESVLK + + +++ ++ IFKRAEQY KEY
Sbjct: 8 VPESVLKKIKRQEEWALAKKDEAVAAKKKSVEARKLIFKRAEQYAKEY 55
Score = 31.5 bits (68), Expect = 0.55
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1
Query: 616 ICVEDLIHEIFTVG 657
ICVEDLIHEI TVG
Sbjct: 179 ICVEDLIHEIMTVG 192
>At3g13580.3 68416.m01710 60S ribosomal protein L7 (RPL7D) similar
to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from
[Arabidopsis thaliana]
Length = 244
Score = 72.1 bits (169), Expect = 3e-13
Identities = 30/45 (66%), Positives = 39/45 (86%)
Frame = +3
Query: 372 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLK 506
+ +K+LQL RLRQI NGVF+++NKAT+NMLR EPY+ +GYPNLK
Sbjct: 100 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTYGYPNLK 144
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/49 (51%), Positives = 35/49 (71%)
Frame = +1
Query: 253 QERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCL 399
+ER+ I+L R+A+ +G +YV EAKL F+IRIRGIN + PK+ K L
Sbjct: 60 KERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL 108
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/35 (60%), Positives = 27/35 (77%)
Frame = +2
Query: 488 GIPQLKEVRELVYKRGFAKLSGQRIPITSNSIVEK 592
G P LK V+EL+YKRGF KL+ QR +T NSIV++
Sbjct: 139 GYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQ 173
Score = 32.7 bits (71), Expect = 0.24
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +2
Query: 83 DSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYR 250
+++ VPESVLK Q + +K++ IF RA+QY KEY+
Sbjct: 3 EAESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQ 58
Score = 31.5 bits (68), Expect = 0.55
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1
Query: 616 ICVEDLIHEIFTVG 657
ICVEDLIHEI TVG
Sbjct: 181 ICVEDLIHEIMTVG 194
>At3g13580.2 68416.m01709 60S ribosomal protein L7 (RPL7D) similar
to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from
[Arabidopsis thaliana]
Length = 244
Score = 72.1 bits (169), Expect = 3e-13
Identities = 30/45 (66%), Positives = 39/45 (86%)
Frame = +3
Query: 372 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLK 506
+ +K+LQL RLRQI NGVF+++NKAT+NMLR EPY+ +GYPNLK
Sbjct: 100 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTYGYPNLK 144
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/49 (51%), Positives = 35/49 (71%)
Frame = +1
Query: 253 QERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCL 399
+ER+ I+L R+A+ +G +YV EAKL F+IRIRGIN + PK+ K L
Sbjct: 60 KERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL 108
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/35 (60%), Positives = 27/35 (77%)
Frame = +2
Query: 488 GIPQLKEVRELVYKRGFAKLSGQRIPITSNSIVEK 592
G P LK V+EL+YKRGF KL+ QR +T NSIV++
Sbjct: 139 GYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQ 173
Score = 32.7 bits (71), Expect = 0.24
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +2
Query: 83 DSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYR 250
+++ VPESVLK Q + +K++ IF RA+QY KEY+
Sbjct: 3 EAESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQ 58
Score = 31.5 bits (68), Expect = 0.55
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1
Query: 616 ICVEDLIHEIFTVG 657
ICVEDLIHEI TVG
Sbjct: 181 ICVEDLIHEIMTVG 194
>At3g13580.1 68416.m01708 60S ribosomal protein L7 (RPL7D) similar
to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from
[Arabidopsis thaliana]
Length = 244
Score = 72.1 bits (169), Expect = 3e-13
Identities = 30/45 (66%), Positives = 39/45 (86%)
Frame = +3
Query: 372 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLK 506
+ +K+LQL RLRQI NGVF+++NKAT+NMLR EPY+ +GYPNLK
Sbjct: 100 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTYGYPNLK 144
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/49 (51%), Positives = 35/49 (71%)
Frame = +1
Query: 253 QERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCL 399
+ER+ I+L R+A+ +G +YV EAKL F+IRIRGIN + PK+ K L
Sbjct: 60 KERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL 108
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/35 (60%), Positives = 27/35 (77%)
Frame = +2
Query: 488 GIPQLKEVRELVYKRGFAKLSGQRIPITSNSIVEK 592
G P LK V+EL+YKRGF KL+ QR +T NSIV++
Sbjct: 139 GYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQ 173
Score = 32.7 bits (71), Expect = 0.24
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +2
Query: 83 DSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYR 250
+++ VPESVLK Q + +K++ IF RA+QY KEY+
Sbjct: 3 EAESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQ 58
Score = 31.5 bits (68), Expect = 0.55
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1
Query: 616 ICVEDLIHEIFTVG 657
ICVEDLIHEI TVG
Sbjct: 181 ICVEDLIHEIMTVG 194
>At2g01250.1 68415.m00037 60S ribosomal protein L7 (RPL7B)
Length = 242
Score = 69.7 bits (163), Expect = 2e-12
Identities = 29/45 (64%), Positives = 39/45 (86%)
Frame = +3
Query: 372 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLK 506
+ +K+LQL RLRQI NGVF+++NKAT+NMLR EPY+ +G+PNLK
Sbjct: 98 KTKKILQLLRLRQIFNGVFLKVNKATMNMLRRVEPYVTYGFPNLK 142
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/49 (48%), Positives = 34/49 (69%)
Frame = +1
Query: 253 QERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCL 399
+E++ I L R+A+ +G +YV EAKL F+IRIRGIN + PK+ K L
Sbjct: 58 KEKELISLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL 106
Score = 51.6 bits (118), Expect = 5e-07
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = +2
Query: 488 GIPQLKEVRELVYKRGFAKLSGQRIPITSNSIVEK 592
G P LK V+EL+YKRG+ KL+ QRI +T NSIVE+
Sbjct: 137 GFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQ 171
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +2
Query: 104 VPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEY 247
VPESVLK Q + + ++ IFKRAEQY KEY
Sbjct: 8 VPESVLKKRKREEEWALEKKQNVEAAKKKNAENRKLIFKRAEQYSKEY 55
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +1
Query: 616 ICVEDLIHEIFTVG 657
IC EDLIHEI TVG
Sbjct: 179 ICTEDLIHEILTVG 192
>At1g80750.1 68414.m09474 60S ribosomal protein L7 (RPL7A) similar
to ribosomal protein L7 GB:AAA03081 GI:307388 from [Homo
sapiens]
Length = 247
Score = 42.7 bits (96), Expect = 2e-04
Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 12/184 (6%)
Frame = +2
Query: 77 KEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRIR 256
+E++K L +PE VLK + S KKK KR E +V E+R +
Sbjct: 3 EEEAKGLDYIPEIVLKKRKNRDELAFIRKKQLELGNSGKKKKKVSDIKRPEDFVHEFRAK 62
Query: 257 NV----MK--------SD*PDKHAIVATTTFPGKPNWHLSSESVVSTKFHRSP*SSATV* 400
V MK S P K +V GK + H ++ +++ +S +
Sbjct: 63 EVDMIRMKQRVKRPKSSPPPVKSDLVFIIRIQGKNDMHPKTKRILNNLQLKSVFTGVFAK 122
Query: 401 TAPNKQWCVCTSE*GYCEYATYRRALHCLGIPQLKEVRELVYKRGFAKLSGQRIPITSNS 580
+ + + Y TY G P K V++L+YK+G + G +P+T N+
Sbjct: 123 ATDSLFQKLLKVQ----PYVTY-------GYPNDKSVKDLIYKKGCTIIEGNPVPLTDNN 171
Query: 581 IVEK 592
I+E+
Sbjct: 172 IIEQ 175
Score = 35.1 bits (77), Expect = 0.045
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +3
Query: 372 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLK 506
+ +++L +L+ + GVF + + L +PY+ +GYPN K
Sbjct: 102 KTKRILNNLQLKSVFTGVFAKATDSLFQKLLKVQPYVTYGYPNDK 146
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +1
Query: 253 QERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCL 399
+E D IR+ ++ + + P ++ L F+IRI+G N + PK+ + N L
Sbjct: 62 KEVDMIRMKQRVKRPKSSPPPVKSDLVFIIRIQGKNDMHPKTKRILNNL 110
>At3g47460.1 68416.m05161 SMC2-like condensin, putative similar to
SMC2-like condensin (TITAN3) [Arabidopsis thaliana]
GI:14279543; contains Pfam profiles PF02483: SMC family
C-terminal domain, PF02463: RecF/RecN/SMC N terminal
domain
Length = 1171
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 5/44 (11%)
Frame = +2
Query: 485 LGIPQLKEVR-----ELVYKRGFAKLSGQRIPITSNSIVEKRAP 601
LGI L++VR ELVYK+G A ++ + +T ++ R+P
Sbjct: 49 LGITNLQQVRAANLQELVYKQGQAGITRATVSVTFDNSERNRSP 92
>At1g56420.1 68414.m06489 expressed protein ; expression supported
by MPSS
Length = 183
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +2
Query: 503 KEVRELVYKRGFAKLSGQRIPITSNSIVEK 592
KE+ E V +R F LSGQ P S+S VEK
Sbjct: 98 KEINETV-ERVFCHLSGQEPPFYSSSNVEK 126
>At5g62410.1 68418.m07832 SMC2-like condensin, putative (SMC2)
(TITAN3) very strong similarity to SMC2-like condensin
(TITAN3) [Arabidopsis thaliana] GI:14279543; contains
Pfam profiles PF02483: SMC family C-terminal domain,
PF02463: RecF/RecN/SMC N terminal domain
Length = 1175
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 5/44 (11%)
Frame = +2
Query: 485 LGIPQLKEVR-----ELVYKRGFAKLSGQRIPITSNSIVEKRAP 601
LGI L++VR ELVYK+G A ++ + +T ++ R+P
Sbjct: 49 LGITNLQQVRAANLQELVYKQGQAGITKATVSVTFDNSERHRSP 92
>At5g06740.1 68418.m00762 lectin protein kinase family protein
contains Legume lectins beta-chain signature,
PROSITE:PS00307 and Serine/Threonine protein kinases
active-site signature, PROSITE:PS00108
Length = 652
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 327 IGICHPNPWYQPSFTEVRKVL 389
+ CHPNP +PS V KVL
Sbjct: 586 LACCHPNPNQRPSMKTVLKVL 606
>At3g59970.3 68416.m06695 methylenetetrahydrofolate reductase 1
(MTHFR1) identical to methylenetetrahydrofolate
reductase MTHFR1 [Arabidopsis thaliana] GI:5911425
Length = 592
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 327 IGICHPNPWYQPSFTEVRKVLQLFRLRQINNGVFVRLN-KATVNMLRIAEPYIAWGYP 497
IG +PW + + + +L +IN+ F+ +N + +VN + P I WG P
Sbjct: 403 IGNLKSSPWSELDGLQPETKIINEQLGKINSNGFLTINSQPSVNAAKSDSPAIGWGGP 460
>At1g26540.1 68414.m03234 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 695
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -3
Query: 404 QSKQLQNFTDF-GETWLIPRIRMTNANLASPGT 309
+ KQL+ + G TW+ P I +N ++ SPGT
Sbjct: 126 ERKQLRTHLIWTGGTWIQPEIEESNKSMFSPGT 158
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,302,072
Number of Sequences: 28952
Number of extensions: 296185
Number of successful extensions: 761
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1477286152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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