Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0510.Seq
         (299 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    25   0.23 
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   1.6  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   1.6  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    21   3.8  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    21   3.8  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    20   5.0  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    20   6.6  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    20   6.6  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    19   8.7  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 24.6 bits (51), Expect = 0.23
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -3

Query: 126 HTKKHFYWIHVRDLNLKIV 70
           +T + +YW++V  LNL IV
Sbjct: 50  NTNRKYYWLNVCCLNLSIV 68


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 1.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 232 CFIFSSSGPLTCTVGVR 182
           C IF +   LTC  G+R
Sbjct: 40  CIIFGAIATLTCIEGLR 56


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 1.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 232 CFIFSSSGPLTCTVGVR 182
           C IF +   LTC  G+R
Sbjct: 36  CIIFGAIATLTCIEGLR 52


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
          protein.
          Length = 384

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 53 CFKCSWTIFR 82
          C+  SWTI+R
Sbjct: 26 CYFASWTIYR 35


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
          protein.
          Length = 384

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 53 CFKCSWTIFR 82
          C+  SWTI+R
Sbjct: 26 CYFASWTIYR 35


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
          protein.
          Length = 383

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 53 CFKCSWTIFR 82
          C+  SWTI+R
Sbjct: 25 CYFTSWTIYR 34


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 68  WTIFRFKSRTCIQ*KCFFVWSYEDL 142
           + IF+      I  +  F+W+Y DL
Sbjct: 206 YDIFKALVLQTINLQITFIWTYNDL 230


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 68  WTIFRFKSRTCIQ*KCFFVWSYEDL 142
           + IF+      I  +  F+W+Y DL
Sbjct: 206 YDIFKALVLQTINLQITFIWTYNDL 230


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 5/16 (31%), Positives = 10/16 (62%)
 Frame = +1

Query: 238 WPEPVTVRCDYRSTQV 285
           WP+PV ++   R + +
Sbjct: 78  WPKPVHIKLTNRESSI 93


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,172
Number of Sequences: 336
Number of extensions: 1302
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  5429307
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)