Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0510.Seq
(299 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC032643-1|AAH32643.1| 527|Homo sapiens SYNCRIP protein protein. 104 4e-23
BC024283-1|AAH24283.1| 453|Homo sapiens Unknown (protein for IM... 104 4e-23
BC015575-1|AAH15575.1| 417|Homo sapiens SYNCRIP protein protein. 104 4e-23
AY034483-1|AAK59705.1| 561|Homo sapiens hnRNP Q1 protein. 104 4e-23
AY034482-1|AAK59704.1| 588|Homo sapiens hnRNP Q2 protein. 104 4e-23
AY034481-1|AAK59703.1| 623|Homo sapiens hnRNP Q3 protein. 104 4e-23
AL136082-5|CAI20448.1| 185|Homo sapiens RP1-3J17.2 protein. 104 4e-23
AL136082-4|CAI20447.1| 623|Homo sapiens RP1-3J17.2 protein. 104 4e-23
AL136082-3|CAI20446.1| 562|Homo sapiens RP1-3J17.2 protein. 104 4e-23
AK222776-1|BAD96496.1| 623|Homo sapiens synaptotagmin binding, ... 104 4e-23
AF155568-1|AAD38198.1| 562|Homo sapiens NSAP1 protein protein. 104 4e-23
AF037448-1|AAC12926.1| 623|Homo sapiens Gry-rbp protein. 104 4e-23
AB209098-1|BAD92335.1| 534|Homo sapiens synaptotagmin binding, ... 104 4e-23
BX640912-1|CAE45953.1| 613|Homo sapiens hypothetical protein pr... 101 5e-22
BC110389-1|AAI10390.1| 607|Homo sapiens HNRPR protein protein. 101 5e-22
BC001449-1|AAH01449.1| 636|Homo sapiens HNRPR protein protein. 101 5e-22
AL109936-4|CAI19027.1| 636|Homo sapiens heterogeneous nuclear r... 101 5e-22
AL109936-3|CAI19026.1| 633|Homo sapiens heterogeneous nuclear r... 101 5e-22
AF000364-1|AAC39540.1| 633|Homo sapiens heterogeneous nuclear r... 101 5e-22
DQ351905-1|ABC73063.1| 595|Homo sapiens heterogeneous nuclear r... 91 8e-19
AL731557-2|CAI14825.1| 334|Homo sapiens ventral anterior homeob... 30 1.5
BC112274-1|AAI12275.1| 555|Homo sapiens coiled-coil domain cont... 29 2.7
BC105055-1|AAI05056.1| 555|Homo sapiens coiled-coil domain cont... 29 2.7
AK075056-1|BAC11373.1| 555|Homo sapiens protein ( Homo sapiens ... 29 2.7
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 29 2.7
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 29 2.7
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 29 2.7
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 29 2.7
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 29 2.7
>BC032643-1|AAH32643.1| 527|Homo sapiens SYNCRIP protein protein.
Length = 527
Score = 104 bits (250), Expect = 4e-23
Identities = 53/84 (63%), Positives = 62/84 (73%)
Frame = +3
Query: 3 ELDERALDALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKSRAGVPGAPA 182
+LDERA++ALKEF DGAL+VL QF DS+L HV NKSAFLCGVMKTYRQ+ + G A +
Sbjct: 56 DLDERAIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADS 115
Query: 183 LTPTVQVKGPDEEKIKQILARTGY 254
KGPDE KIK +L RTGY
Sbjct: 116 ------SKGPDEAKIKALLERTGY 133
Score = 32.3 bits (70), Expect = 0.29
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 197 AGQGPRRGEDKANLGPNRLPLDVTTGQRKYPSP 295
+ +GP + KA L LDVTTGQRKY P
Sbjct: 115 SSKGPDEAKIKALLERTGYTLDVTTGQRKYGGP 147
>BC024283-1|AAH24283.1| 453|Homo sapiens Unknown (protein for
IMAGE:4079825) protein.
Length = 453
Score = 104 bits (250), Expect = 4e-23
Identities = 53/84 (63%), Positives = 62/84 (73%)
Frame = +3
Query: 3 ELDERALDALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKSRAGVPGAPA 182
+LDERA++ALKEF DGAL+VL QF DS+L HV NKSAFLCGVMKTYRQ+ + G A +
Sbjct: 92 DLDERAIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADS 151
Query: 183 LTPTVQVKGPDEEKIKQILARTGY 254
KGPDE KIK +L RTGY
Sbjct: 152 ------SKGPDEAKIKALLERTGY 169
Score = 32.3 bits (70), Expect = 0.29
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 197 AGQGPRRGEDKANLGPNRLPLDVTTGQRKYPSP 295
+ +GP + KA L LDVTTGQRKY P
Sbjct: 151 SSKGPDEAKIKALLERTGYTLDVTTGQRKYGGP 183
>BC015575-1|AAH15575.1| 417|Homo sapiens SYNCRIP protein protein.
Length = 417
Score = 104 bits (250), Expect = 4e-23
Identities = 53/84 (63%), Positives = 62/84 (73%)
Frame = +3
Query: 3 ELDERALDALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKSRAGVPGAPA 182
+LDERA++ALKEF DGAL+VL QF DS+L HV NKSAFLCGVMKTYRQ+ + G A +
Sbjct: 56 DLDERAIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADS 115
Query: 183 LTPTVQVKGPDEEKIKQILARTGY 254
KGPDE KIK +L RTGY
Sbjct: 116 ------SKGPDEAKIKALLERTGY 133
Score = 32.3 bits (70), Expect = 0.29
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 197 AGQGPRRGEDKANLGPNRLPLDVTTGQRKYPSP 295
+ +GP + KA L LDVTTGQRKY P
Sbjct: 115 SSKGPDEAKIKALLERTGYTLDVTTGQRKYGGP 147
>AY034483-1|AAK59705.1| 561|Homo sapiens hnRNP Q1 protein.
Length = 561
Score = 104 bits (250), Expect = 4e-23
Identities = 53/84 (63%), Positives = 62/84 (73%)
Frame = +3
Query: 3 ELDERALDALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKSRAGVPGAPA 182
+LDERA++ALKEF DGAL+VL QF DS+L HV NKSAFLCGVMKTYRQ+ + G A +
Sbjct: 56 DLDERAIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADS 115
Query: 183 LTPTVQVKGPDEEKIKQILARTGY 254
KGPDE KIK +L RTGY
Sbjct: 116 ------SKGPDEAKIKALLERTGY 133
Score = 32.3 bits (70), Expect = 0.29
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 197 AGQGPRRGEDKANLGPNRLPLDVTTGQRKYPSP 295
+ +GP + KA L LDVTTGQRKY P
Sbjct: 115 SSKGPDEAKIKALLERTGYTLDVTTGQRKYGGP 147
>AY034482-1|AAK59704.1| 588|Homo sapiens hnRNP Q2 protein.
Length = 588
Score = 104 bits (250), Expect = 4e-23
Identities = 53/84 (63%), Positives = 62/84 (73%)
Frame = +3
Query: 3 ELDERALDALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKSRAGVPGAPA 182
+LDERA++ALKEF DGAL+VL QF DS+L HV NKSAFLCGVMKTYRQ+ + G A +
Sbjct: 56 DLDERAIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADS 115
Query: 183 LTPTVQVKGPDEEKIKQILARTGY 254
KGPDE KIK +L RTGY
Sbjct: 116 ------SKGPDEAKIKALLERTGY 133
Score = 32.3 bits (70), Expect = 0.29
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 197 AGQGPRRGEDKANLGPNRLPLDVTTGQRKYPSP 295
+ +GP + KA L LDVTTGQRKY P
Sbjct: 115 SSKGPDEAKIKALLERTGYTLDVTTGQRKYGGP 147
>AY034481-1|AAK59703.1| 623|Homo sapiens hnRNP Q3 protein.
Length = 623
Score = 104 bits (250), Expect = 4e-23
Identities = 53/84 (63%), Positives = 62/84 (73%)
Frame = +3
Query: 3 ELDERALDALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKSRAGVPGAPA 182
+LDERA++ALKEF DGAL+VL QF DS+L HV NKSAFLCGVMKTYRQ+ + G A +
Sbjct: 56 DLDERAIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADS 115
Query: 183 LTPTVQVKGPDEEKIKQILARTGY 254
KGPDE KIK +L RTGY
Sbjct: 116 ------SKGPDEAKIKALLERTGY 133
Score = 32.3 bits (70), Expect = 0.29
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 197 AGQGPRRGEDKANLGPNRLPLDVTTGQRKYPSP 295
+ +GP + KA L LDVTTGQRKY P
Sbjct: 115 SSKGPDEAKIKALLERTGYTLDVTTGQRKYGGP 147
>AL136082-5|CAI20448.1| 185|Homo sapiens RP1-3J17.2 protein.
Length = 185
Score = 104 bits (250), Expect = 4e-23
Identities = 53/84 (63%), Positives = 62/84 (73%)
Frame = +3
Query: 3 ELDERALDALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKSRAGVPGAPA 182
+LDERA++ALKEF DGAL+VL QF DS+L HV NKSAFLCGVMKTYRQ+ + G A +
Sbjct: 56 DLDERAIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADS 115
Query: 183 LTPTVQVKGPDEEKIKQILARTGY 254
KGPDE KIK +L RTGY
Sbjct: 116 ------SKGPDEAKIKALLERTGY 133
Score = 32.3 bits (70), Expect = 0.29
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 197 AGQGPRRGEDKANLGPNRLPLDVTTGQRKYPSP 295
+ +GP + KA L LDVTTGQRKY P
Sbjct: 115 SSKGPDEAKIKALLERTGYTLDVTTGQRKYGGP 147
>AL136082-4|CAI20447.1| 623|Homo sapiens RP1-3J17.2 protein.
Length = 623
Score = 104 bits (250), Expect = 4e-23
Identities = 53/84 (63%), Positives = 62/84 (73%)
Frame = +3
Query: 3 ELDERALDALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKSRAGVPGAPA 182
+LDERA++ALKEF DGAL+VL QF DS+L HV NKSAFLCGVMKTYRQ+ + G A +
Sbjct: 56 DLDERAIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADS 115
Query: 183 LTPTVQVKGPDEEKIKQILARTGY 254
KGPDE KIK +L RTGY
Sbjct: 116 ------SKGPDEAKIKALLERTGY 133
Score = 32.3 bits (70), Expect = 0.29
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 197 AGQGPRRGEDKANLGPNRLPLDVTTGQRKYPSP 295
+ +GP + KA L LDVTTGQRKY P
Sbjct: 115 SSKGPDEAKIKALLERTGYTLDVTTGQRKYGGP 147
>AL136082-3|CAI20446.1| 562|Homo sapiens RP1-3J17.2 protein.
Length = 562
Score = 104 bits (250), Expect = 4e-23
Identities = 53/84 (63%), Positives = 62/84 (73%)
Frame = +3
Query: 3 ELDERALDALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKSRAGVPGAPA 182
+LDERA++ALKEF DGAL+VL QF DS+L HV NKSAFLCGVMKTYRQ+ + G A +
Sbjct: 56 DLDERAIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADS 115
Query: 183 LTPTVQVKGPDEEKIKQILARTGY 254
KGPDE KIK +L RTGY
Sbjct: 116 ------SKGPDEAKIKALLERTGY 133
Score = 32.3 bits (70), Expect = 0.29
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 197 AGQGPRRGEDKANLGPNRLPLDVTTGQRKYPSP 295
+ +GP + KA L LDVTTGQRKY P
Sbjct: 115 SSKGPDEAKIKALLERTGYTLDVTTGQRKYGGP 147
>AK222776-1|BAD96496.1| 623|Homo sapiens synaptotagmin binding,
cytoplasmic RNA interacting protein variant protein.
Length = 623
Score = 104 bits (250), Expect = 4e-23
Identities = 53/84 (63%), Positives = 62/84 (73%)
Frame = +3
Query: 3 ELDERALDALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKSRAGVPGAPA 182
+LDERA++ALKEF DGAL+VL QF DS+L HV NKSAFLCGVMKTYRQ+ + G A +
Sbjct: 56 DLDERAIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADS 115
Query: 183 LTPTVQVKGPDEEKIKQILARTGY 254
KGPDE KIK +L RTGY
Sbjct: 116 ------SKGPDEAKIKALLERTGY 133
Score = 32.3 bits (70), Expect = 0.29
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 197 AGQGPRRGEDKANLGPNRLPLDVTTGQRKYPSP 295
+ +GP + KA L LDVTTGQRKY P
Sbjct: 115 SSKGPDEAKIKALLERTGYTLDVTTGQRKYGGP 147
>AF155568-1|AAD38198.1| 562|Homo sapiens NSAP1 protein protein.
Length = 562
Score = 104 bits (250), Expect = 4e-23
Identities = 53/84 (63%), Positives = 62/84 (73%)
Frame = +3
Query: 3 ELDERALDALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKSRAGVPGAPA 182
+LDERA++ALKEF DGAL+VL QF DS+L HV NKSAFLCGVMKTYRQ+ + G A +
Sbjct: 56 DLDERAIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADS 115
Query: 183 LTPTVQVKGPDEEKIKQILARTGY 254
KGPDE KIK +L RTGY
Sbjct: 116 ------SKGPDEAKIKALLERTGY 133
Score = 32.3 bits (70), Expect = 0.29
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 197 AGQGPRRGEDKANLGPNRLPLDVTTGQRKYPSP 295
+ +GP + KA L LDVTTGQRKY P
Sbjct: 115 SSKGPDEAKIKALLERTGYTLDVTTGQRKYGGP 147
>AF037448-1|AAC12926.1| 623|Homo sapiens Gry-rbp protein.
Length = 623
Score = 104 bits (250), Expect = 4e-23
Identities = 53/84 (63%), Positives = 62/84 (73%)
Frame = +3
Query: 3 ELDERALDALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKSRAGVPGAPA 182
+LDERA++ALKEF DGAL+VL QF DS+L HV NKSAFLCGVMKTYRQ+ + G A +
Sbjct: 56 DLDERAIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADS 115
Query: 183 LTPTVQVKGPDEEKIKQILARTGY 254
KGPDE KIK +L RTGY
Sbjct: 116 ------SKGPDEAKIKALLERTGY 133
Score = 32.3 bits (70), Expect = 0.29
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 197 AGQGPRRGEDKANLGPNRLPLDVTTGQRKYPSP 295
+ +GP + KA L LDVTTGQRKY P
Sbjct: 115 SSKGPDEAKIKALLERTGYTLDVTTGQRKYGGP 147
>AB209098-1|BAD92335.1| 534|Homo sapiens synaptotagmin binding,
cytoplasmic RNA interacting protein variant protein.
Length = 534
Score = 104 bits (250), Expect = 4e-23
Identities = 53/84 (63%), Positives = 62/84 (73%)
Frame = +3
Query: 3 ELDERALDALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKSRAGVPGAPA 182
+LDERA++ALKEF DGAL+VL QF DS+L HV NKSAFLCGVMKTYRQ+ + G A +
Sbjct: 28 DLDERAIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADS 87
Query: 183 LTPTVQVKGPDEEKIKQILARTGY 254
KGPDE KIK +L RTGY
Sbjct: 88 ------SKGPDEAKIKALLERTGY 105
Score = 32.3 bits (70), Expect = 0.29
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 197 AGQGPRRGEDKANLGPNRLPLDVTTGQRKYPSP 295
+ +GP + KA L LDVTTGQRKY P
Sbjct: 87 SSKGPDEAKIKALLERTGYTLDVTTGQRKYGGP 119
>BX640912-1|CAE45953.1| 613|Homo sapiens hypothetical protein
protein.
Length = 613
Score = 101 bits (241), Expect = 5e-22
Identities = 51/84 (60%), Positives = 61/84 (72%)
Frame = +3
Query: 3 ELDERALDALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKSRAGVPGAPA 182
+LDERA+DAL+EF +GALSVL QF +S+L HV NKSAFLCGVMKTYRQ+ + G +
Sbjct: 36 DLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQES 95
Query: 183 LTPTVQVKGPDEEKIKQILARTGY 254
KGPDE KIK +L RTGY
Sbjct: 96 ------TKGPDEAKIKALLERTGY 113
Score = 31.9 bits (69), Expect = 0.38
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +2
Query: 203 QGPRRGEDKANLGPNRLPLDVTTGQRKYPSP 295
+GP + KA L LDVTTGQRKY P
Sbjct: 97 KGPDEAKIKALLERTGYTLDVTTGQRKYGGP 127
>BC110389-1|AAI10390.1| 607|Homo sapiens HNRPR protein protein.
Length = 607
Score = 101 bits (241), Expect = 5e-22
Identities = 51/84 (60%), Positives = 61/84 (72%)
Frame = +3
Query: 3 ELDERALDALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKSRAGVPGAPA 182
+LDERA+DAL+EF +GALSVL QF +S+L HV NKSAFLCGVMKTYRQ+ + G +
Sbjct: 33 DLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQES 92
Query: 183 LTPTVQVKGPDEEKIKQILARTGY 254
KGPDE KIK +L RTGY
Sbjct: 93 ------TKGPDEAKIKALLERTGY 110
Score = 31.9 bits (69), Expect = 0.38
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +2
Query: 203 QGPRRGEDKANLGPNRLPLDVTTGQRKYPSP 295
+GP + KA L LDVTTGQRKY P
Sbjct: 94 KGPDEAKIKALLERTGYTLDVTTGQRKYGGP 124
>BC001449-1|AAH01449.1| 636|Homo sapiens HNRPR protein protein.
Length = 636
Score = 101 bits (241), Expect = 5e-22
Identities = 51/84 (60%), Positives = 61/84 (72%)
Frame = +3
Query: 3 ELDERALDALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKSRAGVPGAPA 182
+LDERA+DAL+EF +GALSVL QF +S+L HV NKSAFLCGVMKTYRQ+ + G +
Sbjct: 59 DLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQES 118
Query: 183 LTPTVQVKGPDEEKIKQILARTGY 254
KGPDE KIK +L RTGY
Sbjct: 119 ------TKGPDEAKIKALLERTGY 136
Score = 31.9 bits (69), Expect = 0.38
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +2
Query: 203 QGPRRGEDKANLGPNRLPLDVTTGQRKYPSP 295
+GP + KA L LDVTTGQRKY P
Sbjct: 120 KGPDEAKIKALLERTGYTLDVTTGQRKYGGP 150
>AL109936-4|CAI19027.1| 636|Homo sapiens heterogeneous nuclear
ribonucleoprotein R protein.
Length = 636
Score = 101 bits (241), Expect = 5e-22
Identities = 51/84 (60%), Positives = 61/84 (72%)
Frame = +3
Query: 3 ELDERALDALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKSRAGVPGAPA 182
+LDERA+DAL+EF +GALSVL QF +S+L HV NKSAFLCGVMKTYRQ+ + G +
Sbjct: 59 DLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQES 118
Query: 183 LTPTVQVKGPDEEKIKQILARTGY 254
KGPDE KIK +L RTGY
Sbjct: 119 ------TKGPDEAKIKALLERTGY 136
Score = 31.9 bits (69), Expect = 0.38
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +2
Query: 203 QGPRRGEDKANLGPNRLPLDVTTGQRKYPSP 295
+GP + KA L LDVTTGQRKY P
Sbjct: 120 KGPDEAKIKALLERTGYTLDVTTGQRKYGGP 150
>AL109936-3|CAI19026.1| 633|Homo sapiens heterogeneous nuclear
ribonucleoprotein R protein.
Length = 633
Score = 101 bits (241), Expect = 5e-22
Identities = 51/84 (60%), Positives = 61/84 (72%)
Frame = +3
Query: 3 ELDERALDALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKSRAGVPGAPA 182
+LDERA+DAL+EF +GALSVL QF +S+L HV NKSAFLCGVMKTYRQ+ + G +
Sbjct: 59 DLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQES 118
Query: 183 LTPTVQVKGPDEEKIKQILARTGY 254
KGPDE KIK +L RTGY
Sbjct: 119 ------TKGPDEAKIKALLERTGY 136
Score = 31.9 bits (69), Expect = 0.38
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +2
Query: 203 QGPRRGEDKANLGPNRLPLDVTTGQRKYPSP 295
+GP + KA L LDVTTGQRKY P
Sbjct: 120 KGPDEAKIKALLERTGYTLDVTTGQRKYGGP 150
>AF000364-1|AAC39540.1| 633|Homo sapiens heterogeneous nuclear
ribonucleoprotein R protein.
Length = 633
Score = 101 bits (241), Expect = 5e-22
Identities = 51/84 (60%), Positives = 61/84 (72%)
Frame = +3
Query: 3 ELDERALDALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKSRAGVPGAPA 182
+LDERA+DAL+EF +GALSVL QF +S+L HV NKSAFLCGVMKTYRQ+ + G +
Sbjct: 59 DLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQES 118
Query: 183 LTPTVQVKGPDEEKIKQILARTGY 254
KGPDE KIK +L RTGY
Sbjct: 119 ------TKGPDEAKIKALLERTGY 136
Score = 31.9 bits (69), Expect = 0.38
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +2
Query: 203 QGPRRGEDKANLGPNRLPLDVTTGQRKYPSP 295
+GP + KA L LDVTTGQRKY P
Sbjct: 120 KGPDEAKIKALLERTGYTLDVTTGQRKYGGP 150
>DQ351905-1|ABC73063.1| 595|Homo sapiens heterogeneous nuclear
ribonucleoprotein-R2 protein.
Length = 595
Score = 90.6 bits (215), Expect = 8e-19
Identities = 46/81 (56%), Positives = 57/81 (70%)
Frame = +3
Query: 3 ELDERALDALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKSRAGVPGAPA 182
+LDERA+DAL+EF +GALSVL QF +S+L HV NKSAFLCGVMKTYRQ+ + G +
Sbjct: 59 DLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQES 118
Query: 183 LTPTVQVKGPDEEKIKQILAR 245
KGPDE KIK + +
Sbjct: 119 ------TKGPDEAKIKVFVGK 133
>AL731557-2|CAI14825.1| 334|Homo sapiens ventral anterior homeobox
1 protein.
Length = 334
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 81 DSNLEHVSNKSAFLCGVMKTYRQKSRAGVPGAPALTP 191
DS L V +++A C V++ Q PG PAL P
Sbjct: 162 DSELRSVVSETAATCSVLRLLEQGRLLSPPGLPALLP 198
>BC112274-1|AAI12275.1| 555|Homo sapiens coiled-coil domain
containing 96 protein.
Length = 555
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -3
Query: 96 VRDLNLKIVQEHLKHRRMEILLRHLEHARPTL 1
+RDL K+ + L HRR+E L RH HA TL
Sbjct: 508 LRDLEEKVDKTELLHRRLESLKRH--HASLTL 537
>BC105055-1|AAI05056.1| 555|Homo sapiens coiled-coil domain
containing 96 protein.
Length = 555
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -3
Query: 96 VRDLNLKIVQEHLKHRRMEILLRHLEHARPTL 1
+RDL K+ + L HRR+E L RH HA TL
Sbjct: 508 LRDLEEKVDKTELLHRRLESLKRH--HASLTL 537
>AK075056-1|BAC11373.1| 555|Homo sapiens protein ( Homo sapiens
cDNA FLJ90575 fis, clone OVARC1001952, weakly similar to
TRICHOHYALIN. ).
Length = 555
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -3
Query: 96 VRDLNLKIVQEHLKHRRMEILLRHLEHARPTL 1
+RDL K+ + L HRR+E L RH HA TL
Sbjct: 508 LRDLEEKVDKTELLHRRLESLKRH--HASLTL 537
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator subunit
SRm300 protein.
Length = 2296
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +1
Query: 139 PIDRKVGRAFPVLPL*LRLCRSRAPTRRR*SKSWPEPVTVR 261
P+ R+ R+ P+ R RSR PT RR S+S PVT R
Sbjct: 1917 PVSRRRSRS-RTPPVTRRRSRSRTPTTRRRSRSRTPPVTRR 1956
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +1
Query: 139 PIDRKVGRAFPVLPL*LRLCRSRAPTRRR*SKSWPEPVTVR 261
P+ R+ R+ P+ R RSR PT RR S+S PVT R
Sbjct: 949 PVSRRRSRS-RTPPVTRRRSRSRTPTTRRRSRSRTPPVTRR 988
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +1
Query: 139 PIDRKVGRAFPVLPL*LRLCRSRAPTRRR*SKSWPEPVTVR 261
P+ R+ R+ P+ R RSR PT RR S+S PVT R
Sbjct: 1917 PVSRRRSRS-RTPPVTRRRSRSRTPTTRRRSRSRTPPVTRR 1956
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
protein.
Length = 1275
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +1
Query: 139 PIDRKVGRAFPVLPL*LRLCRSRAPTRRR*SKSWPEPVTVR 261
P+ R+ R+ P+ R RSR PT RR S+S PVT R
Sbjct: 440 PVSRRRSRS-RTPPVTRRRSRSRTPTTRRRSRSRTPPVTRR 479
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +1
Query: 139 PIDRKVGRAFPVLPL*LRLCRSRAPTRRR*SKSWPEPVTVR 261
P+ R+ R+ P+ R RSR PT RR S+S PVT R
Sbjct: 1965 PVSRRRSRS-RTPPVTRRRSRSRTPTTRRRSRSRTPPVTRR 2004
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,990,473
Number of Sequences: 237096
Number of extensions: 927916
Number of successful extensions: 2211
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2191
length of database: 76,859,062
effective HSP length: 76
effective length of database: 58,839,766
effective search space used: 1353314618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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