Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0509.Seq
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    25   0.59 
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          23   2.4  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           23   2.4  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   5.5  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   5.5  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   9.7  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   9.7  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   9.7  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   9.7  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.7  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 9/44 (20%), Positives = 24/44 (54%)
 Frame = +3

Query: 276 FKRENSVVEKKLSTKPIDKYCKDIIQDIEKSSKVIDSHVKQFNN 407
           FK+   ++ ++++ +   K C   + ++ K S+++   V  FN+
Sbjct: 191 FKQRYQLINEQMAVRINPKNCASFVIEVRKLSRLLGEMVGLFND 234


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +3

Query: 285 ENSVVEKKLSTKPIDKYCKDIIQDIEKSSKVIDSHVKQFNN 407
           ++ +V++ LS  PID   +   Q I+ S +  D+    F+N
Sbjct: 178 DHQIVDRLLSHAPIDSANQWYSQTIDNSYQFCDNLQYSFDN 218


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +3

Query: 285 ENSVVEKKLSTKPIDKYCKDIIQDIEKSSKVIDSHVKQFNN 407
           ++ +V++ LS  PID   +   Q I+ S +  D+    F+N
Sbjct: 169 DHQIVDRLLSHAPIDSANQWYSQTIDNSYQFCDNLQYSFDN 209


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +3

Query: 315 TKPIDKYCKDIIQDIEKSSKVIDSHVK 395
           T P D Y  DIIQDI   + V+D   K
Sbjct: 107 TCPGDLYDSDIIQDIVPQN-VLDEEEK 132


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
 Frame = +3

Query: 294 VVEKKLS--TKPIDKYCKDIIQDI-EKSSKVIDSHVKQFNNSRFESDKLVEQLQAVDKLN 464
           VV KK S  T P  ++  D++ D+ E+    ID       N+RF  DK+V   Q  + L 
Sbjct: 304 VVHKKCSNFTLPEIQHNLDVLVDMCEQDIIRID------RNTRFNQDKIVALRQEQETLK 357

Query: 465 ELVNFKGEI 491
             V  + ++
Sbjct: 358 SQVQRESDV 366


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 651 SSNKSWWLKFESPS 610
           SSN+ WW +++  S
Sbjct: 69  SSNRPWWERYQPVS 82


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = +1

Query: 1   ENSTPEEMQKRMEAMKIELINKIKNNDEPAP 93
           E   P+ M     A+   L+N +K  + P P
Sbjct: 305 EYPIPDHMNTTNHAIVQSLVNSMKPKEVPGP 335


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 651 SSNKSWWLKFESPS 610
           SSN+ WW +++  S
Sbjct: 70  SSNRPWWERYQPVS 83


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 651 SSNKSWWLKFESPS 610
           SSN+ WW +++  S
Sbjct: 70  SSNRPWWERYQPVS 83


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 625 FEPPGFIR*FTGERNDIQYF 684
           F   GFI  F  + N IQYF
Sbjct: 366 FPVAGFISDFDCDINSIQYF 385


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,600
Number of Sequences: 336
Number of extensions: 2348
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)