Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0509.Seq
         (698 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81055-4|CAB02893.1|  824|Caenorhabditis elegans Hypothetical pr...    33   0.15 
U53180-6|AAA96288.1|  202|Caenorhabditis elegans Hypothetical pr...    31   0.79 
Z98851-1|CAB11539.2|  327|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z77666-3|CAB01225.1|  698|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z78415-1|CAB01671.1|  280|Caenorhabditis elegans Hypothetical pr...    28   5.6  
U32305-8|AAK18853.4|  492|Caenorhabditis elegans Regulator of g ...    28   5.6  
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr...    28   7.4  
AF068717-4|AAC17764.2|  357|Caenorhabditis elegans Serpentine re...    28   7.4  
Z68117-4|CAA92180.1|  589|Caenorhabditis elegans Hypothetical pr...    27   9.8  
Z48621-12|CAA88545.2|  425|Caenorhabditis elegans Hypothetical p...    27   9.8  
AL021571-6|CAN99719.1|  142|Caenorhabditis elegans Hypothetical ...    27   9.8  
AF047661-4|AAC04435.2|  931|Caenorhabditis elegans Hypothetical ...    27   9.8  

>Z81055-4|CAB02893.1|  824|Caenorhabditis elegans Hypothetical
           protein F01G10.5 protein.
          Length = 824

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 15/62 (24%), Positives = 33/62 (53%)
 Frame = +3

Query: 327 DKYCKDIIQDIEKSSKVIDSHVKQFNNSRFESDKLVEQLQAVDKLNELVNFKGEIPEETL 506
           +K    ++Q +E+S   +    +   +   E+ K+VEQL+ V +LNE +  + +  ++  
Sbjct: 282 EKESAQLLQQLEESRAALRDEQRHLEHQEAENGKIVEQLKTVSELNEKLTMQVKDLQDAS 341

Query: 507 KN 512
           +N
Sbjct: 342 EN 343


>U53180-6|AAA96288.1|  202|Caenorhabditis elegans Hypothetical
           protein D1014.4 protein.
          Length = 202

 Score = 31.1 bits (67), Expect = 0.79
 Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
 Frame = +3

Query: 273 KFKRENSVVEK-KLSTKPIDKYCKDIIQDIEKSSKVIDSHVKQFNNSRFESDKLVEQLQA 449
           K+   N   E+ K+ T+ ++    D++++ ++        ++Q + +  ES K VEQL+A
Sbjct: 17  KYDHLNEDYERIKIRTESLENRLLDVVEENDRKDNENSERIRQLDEALKESQKRVEQLEA 76


>Z98851-1|CAB11539.2|  327|Caenorhabditis elegans Hypothetical
           protein H12I19.1 protein.
          Length = 327

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = -1

Query: 467 FVQFIDGLQLLHKLIAFKSRIIKLFYVTIYDFATLFYILNYIFAVFVNR 321
           F Q  +    L K I  +  ++ + YV I+    LFYIL + F V+VN+
Sbjct: 3   FSQVFENQNFLAKFID-EGILLSVLYVLIFIILFLFYILVFPFYVYVNK 50


>Z77666-3|CAB01225.1|  698|Caenorhabditis elegans Hypothetical
           protein K08E7.3 protein.
          Length = 698

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 16/55 (29%), Positives = 31/55 (56%)
 Frame = +3

Query: 234 IDNHSGGVNNDDFKFKRENSVVEKKLSTKPIDKYCKDIIQDIEKSSKVIDSHVKQ 398
           IDN SGGV N  F   +++ + +K+ + K +++  + I  + E + K   S +K+
Sbjct: 168 IDNSSGGVENHGFDDHKDDEIPKKQRTPKILNRSLESICTE-EYTEKREVSEMKE 221


>Z78415-1|CAB01671.1|  280|Caenorhabditis elegans Hypothetical
           protein C17G1.1 protein.
          Length = 280

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +3

Query: 276 FKRENSVVEKKLSTKPIDKYCKDIIQDIEKSSKVIDSHVKQFNNS 410
           +K E S   K    +P+  YC+DI + I +  +    H K+FN +
Sbjct: 205 YKEERSRKNKD-DREPVVSYCRDIKEHIARMERGQIKHGKEFNKN 248


>U32305-8|AAK18853.4|  492|Caenorhabditis elegans Regulator of g
           protein signalingprotein 5 protein.
          Length = 492

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 279 KRENSVVEKKLSTKPIDKYCKDIIQDIEKS 368
           ++   +V+ KLS  P+ K C D  QD  KS
Sbjct: 156 RKIKQIVDDKLSASPLQKSCFDEAQDFVKS 185


>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical
           protein T28C6.9 protein.
          Length = 1861

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 12/67 (17%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = +3

Query: 294 VVEKKLSTKPIDKYCKDIIQDIEK-SSKVIDSHVKQFNNSRFESDKLVEQLQAVDKLNEL 470
           +VE +L TK +DK C+ +++  E+  +++ +  +           +L EQ + + +++  
Sbjct: 2   IVEDRLKTKALDKKCRVLVEQNEQLMARLCELEMSHGGADETRERRLAEQEERIRQISSA 61

Query: 471 VNFKGEI 491
           +  + ++
Sbjct: 62  LESERDV 68


>AF068717-4|AAC17764.2|  357|Caenorhabditis elegans Serpentine
           receptor, class w protein144 protein.
          Length = 357

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = -1

Query: 467 FVQFIDGLQLLHKLIAFKSRIIKLFYVTIYDFATLFYILNYIF 339
           F+     L L+HK +   S  I + ++ I+D  ++FY +  ++
Sbjct: 49  FINIFHFLILIHKPLRSSSINIIMAFIAIFDICSMFYKMKQVY 91


>Z68117-4|CAA92180.1|  589|Caenorhabditis elegans Hypothetical
           protein F45E6.2 protein.
          Length = 589

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/43 (30%), Positives = 27/43 (62%)
 Frame = +3

Query: 360 EKSSKVIDSHVKQFNNSRFESDKLVEQLQAVDKLNELVNFKGE 488
           E++ K +D  +K  NN + +++K+  + Q +DK+  +V  KG+
Sbjct: 478 ERTWKQLDL-LKTGNNIQLDNEKIQRKRQDIDKIASIVRQKGD 519


>Z48621-12|CAA88545.2|  425|Caenorhabditis elegans Hypothetical
           protein R07B1.8 protein.
          Length = 425

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 333 YCKDIIQDIEKSSKVIDSHVKQFNNSRFES 422
           YC D+IQ   KS+      + Q+  S F+S
Sbjct: 21  YCADLIQQCAKSAAEYTEQILQYKESAFKS 50


>AL021571-6|CAN99719.1|  142|Caenorhabditis elegans Hypothetical
           protein T19A6.3b protein.
          Length = 142

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -1

Query: 437 LHKLIAFKSRIIKLFYVTIYDFATLFYILNYIFAVF 330
           L K+  F+  +I +F  T  DF   F++   +FAVF
Sbjct: 63  LQKIEIFQIPMIDMFLTTHLDFTLCFFVGLLLFAVF 98


>AF047661-4|AAC04435.2|  931|Caenorhabditis elegans Hypothetical
           protein M70.1 protein.
          Length = 931

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
 Frame = +3

Query: 378 IDSHVKQFNNSRFESDKLVEQLQAVDKLNELV------NFKGEIPEETLK 509
           + SHVK    +   S  L   L AV K++EL+      N    IP ETLK
Sbjct: 414 VGSHVKSVVTASQNSQLLERTLNAVKKISELIATSKLGNSLDSIPVETLK 463


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,875,308
Number of Sequences: 27780
Number of extensions: 220244
Number of successful extensions: 750
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)