Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0505.Seq
(597 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g23660.1 68416.m02975 transport protein, putative similar to ... 81 7e-16
At5g43670.1 68418.m05337 transport protein, putative similar to ... 78 5e-15
At1g05520.1 68414.m00565 transport protein, putative similar to ... 77 9e-15
At4g14160.3 68417.m02185 transport protein, putative similar to ... 66 2e-11
At4g14160.2 68417.m02186 transport protein, putative similar to ... 66 2e-11
At4g14160.1 68417.m02184 transport protein, putative similar to ... 66 2e-11
At2g21630.1 68415.m02573 transport protein, putative similar to ... 64 9e-11
At3g07100.1 68416.m00845 protein transport protein Sec24, putati... 35 0.047
At4g32640.1 68417.m04646 sec23/sec24 transport protein-related 33 0.14
At5g56170.1 68418.m07007 expressed protein contains similarity t... 29 1.8
At3g44340.1 68416.m04764 sec23/sec24 transport family protein co... 29 1.8
At4g01810.1 68417.m00238 protein transport protein-related relat... 28 4.1
At5g62330.1 68418.m07824 expressed protein 28 5.4
At4g24930.1 68417.m03570 thylakoid lumenal 17.9 kDa protein, chl... 27 7.2
At4g28630.1 68417.m04093 ABC transporter family protein identica... 27 9.5
At1g77405.1 68414.m09014 pentatricopeptide (PPR) repeat-containi... 27 9.5
At1g63490.1 68414.m07179 transcription factor jumonji (jmjC) dom... 27 9.5
>At3g23660.1 68416.m02975 transport protein, putative similar to
Swiss-Prot:Q15436 protein transport protein Sec23A [Homo
sapiens]
Length = 765
Score = 80.6 bits (190), Expect = 7e-16
Identities = 33/68 (48%), Positives = 43/68 (63%)
Frame = +1
Query: 250 VPPLKERPDLPPIQYEPVLCTRNTCRAILNPMCQVDYRAKLWVCNFCFQRNPFPPQYAAI 429
+ P++ D+P + Y P+ C TC A LN QVD+ AKLW+C FC+QRN FPP Y I
Sbjct: 40 ISPIRRHADIPTLPYAPLRC--RTCSAALNAYAQVDFTAKLWICPFCYQRNHFPPHYHVI 97
Query: 430 SEQHQPAE 453
SE + P E
Sbjct: 98 SETNLPGE 105
Score = 51.6 bits (118), Expect = 4e-07
Identities = 38/139 (27%), Positives = 57/139 (41%), Gaps = 5/139 (3%)
Frame = +2
Query: 161 EDRDGIRFTWNVWPSSRIEATRLVVPLACLYHRLRSAPTYHRYSTSLYSVHEIHAELY*T 340
E DG+R TWNVWP S+ EA++ V+PLA +R + A L
Sbjct: 10 EGIDGVRMTWNVWPHSKAEASKCVIPLAACISPIRRHADIPTLPYAPLRCRTCSAAL--N 67
Query: 341 QCARWITELNYGSATFASNETHFHLNMLLYQNSINLQKLIPNFSTIEYTI-----NASNR 505
A+ F HF + + + +L P ++T+EYT+ N
Sbjct: 68 AYAQVDFTAKLWICPFCYQRNHFPPHYHVISETNLPGELYPQYTTVEYTLPPPVANGEGL 127
Query: 506 LGPKSTCLFVDTWLDEEEL 562
+ P +DT + EEEL
Sbjct: 128 VDPPVFVFVLDTCMIEEEL 146
>At5g43670.1 68418.m05337 transport protein, putative similar to
Swiss-Prot:Q15436 protein transport protein Sec23A [Homo
sapiens]
Length = 794
Score = 77.8 bits (183), Expect = 5e-15
Identities = 31/70 (44%), Positives = 48/70 (68%)
Frame = +1
Query: 244 LLVPPLKERPDLPPIQYEPVLCTRNTCRAILNPMCQVDYRAKLWVCNFCFQRNPFPPQYA 423
++ PL +LP I Y+P++C+R C A+LNP +VDY++++W C FCF +N FP Y+
Sbjct: 35 IMYTPLMHFSELPTIPYDPLICSR--CGAVLNPYARVDYQSRIWSCPFCFHKNLFPRSYS 92
Query: 424 AISEQHQPAE 453
I+E + PAE
Sbjct: 93 GITETNLPAE 102
Score = 37.9 bits (84), Expect = 0.005
Identities = 12/28 (42%), Positives = 22/28 (78%)
Frame = +2
Query: 170 DGIRFTWNVWPSSRIEATRLVVPLACLY 253
+G+R++WN WP+++ + LVVPL+ +Y
Sbjct: 10 EGLRWSWNSWPTTKSDCESLVVPLSIMY 37
>At1g05520.1 68414.m00565 transport protein, putative similar to
Swiss-Prot:Q15436 protein transport protein Sec23A [Homo
sapiens]
Length = 783
Score = 77.0 bits (181), Expect = 9e-15
Identities = 30/68 (44%), Positives = 43/68 (63%)
Frame = +1
Query: 250 VPPLKERPDLPPIQYEPVLCTRNTCRAILNPMCQVDYRAKLWVCNFCFQRNPFPPQYAAI 429
+ P++ D+P ++Y P+ C C A LNP +VD+ AK+W+C CFQRN FPP Y +
Sbjct: 40 ISPIRYHRDIPSVEYAPLRC--RICTAALNPFARVDFLAKIWICPICFQRNHFPPHYHVM 97
Query: 430 SEQHQPAE 453
SE + P E
Sbjct: 98 SETNVPCE 105
Score = 46.4 bits (105), Expect = 1e-05
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +2
Query: 161 EDRDGIRFTWNVWPSSRIEATRLVVPLACLYHRLRSAPTYHR 286
E DG+R TWNVWP +++EA++ V+P+A +R YHR
Sbjct: 10 EGIDGVRMTWNVWPRTKVEASKCVIPVAACISPIR----YHR 47
>At4g14160.3 68417.m02185 transport protein, putative similar to
Swiss-Prot:Q15436 protein transport protein Sec23A [Homo
sapiens]
Length = 620
Score = 65.7 bits (153), Expect = 2e-11
Identities = 28/68 (41%), Positives = 41/68 (60%)
Frame = +1
Query: 250 VPPLKERPDLPPIQYEPVLCTRNTCRAILNPMCQVDYRAKLWVCNFCFQRNPFPPQYAAI 429
+ P++ P + + Y P+ C TC+A+LN +VD+ A WVC FC+ RN FP Y +I
Sbjct: 46 ISPIRRHPLILDLPYAPLDC--KTCKALLNAFARVDFAAMNWVCPFCYHRNHFPSHYHSI 103
Query: 430 SEQHQPAE 453
SE + P E
Sbjct: 104 SEINLPGE 111
Score = 58.8 bits (136), Expect = 3e-09
Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Frame = +2
Query: 119 IGDMATYEEFIQQNEDRDGIRFTWNVWPSSRIEATRLVVPLACLYHRLRSAPTYHRYSTS 298
+ D A EE E DG+R TWN+WP +++EA++ V+PLA +R P +
Sbjct: 4 MADKAKVEEM--DWEGIDGVRMTWNLWPRTKVEASKCVIPLAASISPIRRHPLILDLPYA 61
Query: 299 LYSVHEIHAELY*TQCARWITELNYGSATFASNETHF--HLNMLLYQNSINLQ-KLIPNF 469
A L AR F + HF H + + + INL +L P +
Sbjct: 62 PLDCKTCKALL--NAFARVDFAAMNWVCPFCYHRNHFPSHYHSI---SEINLPGELYPQY 116
Query: 470 STIEYTINAS-NRLGPKSTCLFV-DTWLDEEELWGTSKDSL 586
+T+EYT+ +R+ P +FV DT + EEEL G +K +L
Sbjct: 117 TTVEYTLPPDPSRVPPPPVFVFVLDTCMIEEEL-GYAKSAL 156
>At4g14160.2 68417.m02186 transport protein, putative similar to
Swiss-Prot:Q15436 protein transport protein Sec23A [Homo
sapiens]
Length = 772
Score = 65.7 bits (153), Expect = 2e-11
Identities = 28/68 (41%), Positives = 41/68 (60%)
Frame = +1
Query: 250 VPPLKERPDLPPIQYEPVLCTRNTCRAILNPMCQVDYRAKLWVCNFCFQRNPFPPQYAAI 429
+ P++ P + + Y P+ C TC+A+LN +VD+ A WVC FC+ RN FP Y +I
Sbjct: 46 ISPIRRHPLILDLPYAPLDC--KTCKALLNAFARVDFAAMNWVCPFCYHRNHFPSHYHSI 103
Query: 430 SEQHQPAE 453
SE + P E
Sbjct: 104 SEINLPGE 111
Score = 58.8 bits (136), Expect = 3e-09
Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Frame = +2
Query: 119 IGDMATYEEFIQQNEDRDGIRFTWNVWPSSRIEATRLVVPLACLYHRLRSAPTYHRYSTS 298
+ D A EE E DG+R TWN+WP +++EA++ V+PLA +R P +
Sbjct: 4 MADKAKVEEM--DWEGIDGVRMTWNLWPRTKVEASKCVIPLAASISPIRRHPLILDLPYA 61
Query: 299 LYSVHEIHAELY*TQCARWITELNYGSATFASNETHF--HLNMLLYQNSINLQ-KLIPNF 469
A L AR F + HF H + + + INL +L P +
Sbjct: 62 PLDCKTCKALL--NAFARVDFAAMNWVCPFCYHRNHFPSHYHSI---SEINLPGELYPQY 116
Query: 470 STIEYTINAS-NRLGPKSTCLFV-DTWLDEEELWGTSKDSL 586
+T+EYT+ +R+ P +FV DT + EEEL G +K +L
Sbjct: 117 TTVEYTLPPDPSRVPPPPVFVFVLDTCMIEEEL-GYAKSAL 156
>At4g14160.1 68417.m02184 transport protein, putative similar to
Swiss-Prot:Q15436 protein transport protein Sec23A [Homo
sapiens]
Length = 621
Score = 65.7 bits (153), Expect = 2e-11
Identities = 28/68 (41%), Positives = 41/68 (60%)
Frame = +1
Query: 250 VPPLKERPDLPPIQYEPVLCTRNTCRAILNPMCQVDYRAKLWVCNFCFQRNPFPPQYAAI 429
+ P++ P + + Y P+ C TC+A+LN +VD+ A WVC FC+ RN FP Y +I
Sbjct: 46 ISPIRRHPLILDLPYAPLDC--KTCKALLNAFARVDFAAMNWVCPFCYHRNHFPSHYHSI 103
Query: 430 SEQHQPAE 453
SE + P E
Sbjct: 104 SEINLPGE 111
Score = 58.8 bits (136), Expect = 3e-09
Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Frame = +2
Query: 119 IGDMATYEEFIQQNEDRDGIRFTWNVWPSSRIEATRLVVPLACLYHRLRSAPTYHRYSTS 298
+ D A EE E DG+R TWN+WP +++EA++ V+PLA +R P +
Sbjct: 4 MADKAKVEEM--DWEGIDGVRMTWNLWPRTKVEASKCVIPLAASISPIRRHPLILDLPYA 61
Query: 299 LYSVHEIHAELY*TQCARWITELNYGSATFASNETHF--HLNMLLYQNSINLQ-KLIPNF 469
A L AR F + HF H + + + INL +L P +
Sbjct: 62 PLDCKTCKALL--NAFARVDFAAMNWVCPFCYHRNHFPSHYHSI---SEINLPGELYPQY 116
Query: 470 STIEYTINAS-NRLGPKSTCLFV-DTWLDEEELWGTSKDSL 586
+T+EYT+ +R+ P +FV DT + EEEL G +K +L
Sbjct: 117 TTVEYTLPPDPSRVPPPPVFVFVLDTCMIEEEL-GYAKSAL 156
>At2g21630.1 68415.m02573 transport protein, putative similar to
Swiss-Prot:Q15436 protein transport protein Sec23A [Homo
sapiens]
Length = 761
Score = 63.7 bits (148), Expect = 9e-11
Identities = 29/66 (43%), Positives = 41/66 (62%)
Frame = +1
Query: 256 PLKERPDLPPIQYEPVLCTRNTCRAILNPMCQVDYRAKLWVCNFCFQRNPFPPQYAAISE 435
PL+ + L P Y P+ C TCR++LNP VD+ A W C FCF RNPFP Y+++++
Sbjct: 45 PLRSQSLLLP--YSPLRC--RTCRSVLNPYSVVDFSACNWGCPFCFNRNPFPLNYSSVAD 100
Query: 436 QHQPAE 453
+ P E
Sbjct: 101 NNLPPE 106
Score = 34.7 bits (76), Expect = 0.047
Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 4/138 (2%)
Frame = +2
Query: 161 EDRDGIRFTWNVWP--SSRIEATRLVVPLACLYHRLRSAPTYHRYSTSLYSVHEIHA--E 328
E +DG+R WN+ P + + ++ VP++ +Y L+ P + YS
Sbjct: 8 EAQDGVRMPWNIIPVATKKEQSIDSEVPVSAIYTPLK--PLRSQSLLLPYSPLRCRTCRS 65
Query: 329 LY*TQCARWITELNYGSATFASNETHFHLNMLLYQNSINLQKLIPNFSTIEYTINASNRL 508
+ + N+G F N F LN ++ +L P+ +T+EY ++ +
Sbjct: 66 VLNPYSVVDFSACNWG-CPFCFNRNPFPLNYSSVADNNLPPELFPHSTTVEYLCDSFSSP 124
Query: 509 GPKSTCLFVDTWLDEEEL 562
P VDT L EEL
Sbjct: 125 SPPVFLFVVDTCLISEEL 142
>At3g07100.1 68416.m00845 protein transport protein Sec24, putative
similar to protein transport protein Sec24A
(SEC24-related protein) [Homo sapiens] SWISS-PROT:O95486
Length = 1038
Score = 34.7 bits (76), Expect = 0.047
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Frame = +1
Query: 241 GLLVPPLKERPD---LPPIQYEPVLCTR-NTCRAILNPMCQVDYRAKLWVCNFCFQRNPF 408
G +V PL E P+ +P I + R CR +NP + W CN C N
Sbjct: 343 GAVVCPLAETPEGEEVPLIDFGSTGIIRCRRCRTYVNPFVTFTDSGRKWRCNICSMLNDV 402
Query: 409 PPQY 420
P +Y
Sbjct: 403 PGEY 406
>At4g32640.1 68417.m04646 sec23/sec24 transport protein-related
Length = 1069
Score = 33.1 bits (72), Expect = 0.14
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Frame = +1
Query: 244 LLVPPLK-ERPDLPPIQYE------PVLCTRNTCRAILNPMCQVDYRAKLWVCNFCFQRN 402
L+V PL P PIQ PV C+R C+ +NP + + + ++CNFC +
Sbjct: 402 LMVQPLALSHPSEEPIQVVDFGEGGPVRCSR--CKGYINPFMKFIDQGRKFICNFCGYTD 459
Query: 403 PFPPQY 420
P Y
Sbjct: 460 ETPRDY 465
>At5g56170.1 68418.m07007 expressed protein contains similarity to
GPI-anchored protein
Length = 168
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 368 NYGSATFASNETHFHLNMLLYQNSINLQKLIP-NFSTIEYTINASNRLGPK 517
++ S++F S+ +++L +N + +K P NF + YTI S GPK
Sbjct: 19 SFSSSSFISDGVFESQSLVLGRNLLQTKKTCPVNFEFMNYTIITSKCKGPK 69
>At3g44340.1 68416.m04764 sec23/sec24 transport family protein
contains Pfam domains PF04811: Sec23/Sec24 trunk domain,
PF04815: Sec23/Sec24 helical domain and PF04810:
Sec23/Sec24 zinc finger
Length = 1096
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
Frame = +1
Query: 244 LLVPPLK-ERPDLPPIQYE------PVLCTRNTCRAILNPMCQVDYRAKLWVCNFCFQRN 402
L+V P+ P PIQ PV C+R C+ +NP + + + ++CN C +
Sbjct: 405 LIVQPMALSHPSEEPIQVVDFGESGPVRCSR--CKGYVNPFMKFIDQGRKFICNLCGYTD 462
Query: 403 PFPPQY 420
P Y
Sbjct: 463 ETPRDY 468
>At4g01810.1 68417.m00238 protein transport protein-related related
to Sec23 protein [Homo sapiens] gi|1296664|emb|CAA65774
Length = 880
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Frame = +1
Query: 226 ACCAFGLLVPPLKE-RPDLPPIQYEPVLCTRNTCRAILNPMCQVDYRAKLWVCNFCFQRN 402
A FG +V +E P IQ +P C C A NP + + W C C N
Sbjct: 176 ASLGFGAIVSAGREISPGPQIIQRDPHRCLN--CGAYSNPYSSILIGSGQWQCVICENMN 233
Query: 403 PFPPQYAAISE 435
+Y A S+
Sbjct: 234 GSKGEYVASSK 244
>At5g62330.1 68418.m07824 expressed protein
Length = 170
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 294 RACTLYTKYMQSYIEPNVPGGLQS*IMGLQLLLPTKPISTSICCYIRTAST 446
++ L++ ++QSY NVP ++ +GL+ P KP + C Y R + T
Sbjct: 31 KSTKLHSIFLQSY---NVPIPVRGHALGLRKYDPNKPSTPRGCSYRRESET 78
>At4g24930.1 68417.m03570 thylakoid lumenal 17.9 kDa protein,
chloroplast SP:Q9SW33;GI:17369630;PMID:11719511; similar
to expressed protein gi:12321169 {Oryza sativa}
Length = 225
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 369 IMGLQLLLPTKPISTSICCYIRTASTCRN*FLTFPP 476
+ LQL+LP +P ST + C +++ + T PP
Sbjct: 4 VASLQLILPPRPRSTKLLCSLQSPKQEQELSSTSPP 39
>At4g28630.1 68417.m04093 ABC transporter family protein identical
to half-molecule ABC transporter ATM1 GI:9964117 from
[Arabidopsis thaliana]
Length = 678
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 212 IEATRLVVPLACLYHRLRSAPTYHRYST 295
+ +R ++ A LYHRLRS +H +S+
Sbjct: 2 MRGSRFLLSRASLYHRLRSDHHHHSFSS 29
>At1g77405.1 68414.m09014 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 410
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/52 (25%), Positives = 22/52 (42%)
Frame = +1
Query: 280 PPIQYEPVLCTRNTCRAILNPMCQVDYRAKLWVCNFCFQRNPFPPQYAAISE 435
PP Y + + CR + C+ R ++W N F+ F Y+ +E
Sbjct: 234 PPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGYYSVTNE 285
>At1g63490.1 68414.m07179 transcription factor jumonji (jmjC)
domain-containing protein similar to PLU-1 protein
(GI:4902724) [Homo sapiens] and PLU1 (GI:22726257) [Mus
musculus]; similar to Retinoblastoma-binding protein 2
(RBBP-2) (SP:P29375) {Homo sapiens}; contains Pfam
PF02373: jmjC domain
Length = 1116
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +2
Query: 377 SATFASNETHFHLNMLLYQNSINLQKLIPNFSTIEYTINASNRLGPKS 520
++T NET + L + S+N+ ++P IE TI+++ KS
Sbjct: 733 ASTILENETQMYELKDLVRMSVNIDAVLPTLQGIENTISSAETWLQKS 780
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,255,002
Number of Sequences: 28952
Number of extensions: 311295
Number of successful extensions: 716
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 713
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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