Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0504.Seq
         (508 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    24   0.68 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   2.7  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   8.4  

>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 24.2 bits (50), Expect = 0.68
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 145 MGYPPPCNWLFPKKK 189
           +G  PP  WLF KKK
Sbjct: 318 LGSLPPFKWLFKKKK 332


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 154 PPPCNWLFPKKKSWCTRRLQVH 219
           P  CNWLF  K+   +  LQ H
Sbjct: 344 PFVCNWLFCGKRFTRSDELQRH 365


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -1

Query: 229 FWRSEPEAFWYT-RISF*ERASCKAAGNPFN 140
           +WR + E FW+   +SF E   C+   N F+
Sbjct: 121 YWRQQYEDFWHRYTLSFIEN-YCQFLYNCFH 150


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,276
Number of Sequences: 336
Number of extensions: 2453
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)