Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0503.Seq
         (746 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    24   1.1  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    24   1.1  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    24   1.1  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   4.5  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   4.5  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   6.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   6.0  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   7.9  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -2

Query: 208 HDRCTIV*YNRLSIVIYNQLVHTTGTQGGSDRIDNKL 98
           HD CT+  Y   S V   +LV       GSD + +K+
Sbjct: 149 HDSCTVNNYQDASNVRNCELVGLADLNQGSDYVRSKI 185


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -2

Query: 208 HDRCTIV*YNRLSIVIYNQLVHTTGTQGGSDRIDNKL 98
           HD CT+  Y   S V   +LV       GSD + +K+
Sbjct: 150 HDSCTVNNYQDASNVRNCELVGLADLNQGSDYVRSKI 186


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -2

Query: 208 HDRCTIV*YNRLSIVIYNQLVHTTGTQGGSDRIDNKL 98
           HD CT+  Y   S V   +LV       GSD + +K+
Sbjct: 150 HDSCTVNNYQDASNVRNCELVGLADLNQGSDYVRSKI 186


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -1

Query: 458 SSGDLLSIFT-ACSLIFSMASLDAVLTALIRTRG*TPSSTN 339
           + G  LSI   +  ++FS  +   VL  +++ R  TPS  N
Sbjct: 49  NEGHQLSIIVYSILMVFSAIANTTVLVLIVKRRRKTPSRIN 89


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -1

Query: 458 SSGDLLSIFT-ACSLIFSMASLDAVLTALIRTRG*TPSSTN 339
           + G  LSI   +  ++FS  +   VL  +++ R  TPS  N
Sbjct: 49  NEGHQLSIIVYSILMVFSAIANTTVLVLIVKRRRKTPSRIN 89


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 94  LSTCCRCGQNHP 129
           L TC RC  N+P
Sbjct: 512 LQTCVRCPNNYP 523


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -2

Query: 634 IFKSSTGNLLDSQSCREAEVECPKTGQPSTTIL 536
           +F     N +D  +   A VEC   G P+  I+
Sbjct: 24  VFVREPPNRIDFSNTTGAVVECSAHGNPTPDII 56


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -1

Query: 743 QILRSANFAVFVGLRLHLKASVTESFLG 660
           ++ R ANF++F+     +   + + FLG
Sbjct: 73  ELERDANFSLFIPKHRRIAGRLIDIFLG 100


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,862
Number of Sequences: 336
Number of extensions: 3707
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)