Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0501.Seq
(597 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 170 2e-41
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 157 1e-37
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 144 1e-33
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 142 6e-33
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 136 3e-31
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 129 6e-29
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 109 6e-23
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 107 2e-22
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 87 4e-16
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 80 4e-14
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 78 2e-13
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 77 3e-13
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 75 1e-12
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 74 2e-12
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 73 7e-12
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 71 2e-11
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 69 8e-11
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 69 1e-10
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 67 3e-10
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 66 4e-10
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 66 4e-10
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 66 8e-10
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 66 8e-10
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 65 1e-09
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 62 1e-08
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 61 2e-08
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 61 2e-08
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 60 3e-08
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 60 4e-08
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 58 2e-07
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 58 2e-07
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 57 3e-07
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 57 3e-07
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 56 6e-07
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 54 2e-06
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 54 3e-06
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 53 4e-06
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 53 6e-06
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 52 1e-05
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 51 2e-05
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 51 2e-05
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 51 2e-05
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 50 4e-05
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 49 7e-05
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 49 1e-04
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 48 1e-04
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 48 2e-04
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 48 2e-04
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 47 3e-04
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 47 4e-04
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 46 7e-04
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 46 7e-04
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 46 9e-04
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 46 9e-04
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 45 0.001
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 44 0.002
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 43 0.005
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 43 0.006
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 43 0.006
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 42 0.008
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 41 0.019
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 41 0.019
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 39 0.078
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 38 0.18
UniRef50_Q86AL0 Cluster: Similar to Dictyostelium discoideum (Sl... 38 0.18
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 38 0.24
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.24
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 38 0.24
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.31
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 37 0.41
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 37 0.41
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 36 0.55
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 36 0.72
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 36 0.72
UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n... 36 0.96
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 36 0.96
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.3
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 1.3
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 34 2.2
UniRef50_Q60846 Cluster: Tumor necrosis factor receptor superfam... 34 2.9
UniRef50_Q74BQ5 Cluster: Glycosyl transferase domain protein; n=... 33 3.9
UniRef50_Q9NQ11 Cluster: Probable cation-transporting ATPase 13A... 33 3.9
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 5.1
UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma g... 33 6.7
UniRef50_Q9RY83 Cluster: Putative uncharacterized protein; n=2; ... 32 8.9
UniRef50_A6DTI5 Cluster: Probable sulfatase; n=1; Lentisphaera a... 32 8.9
UniRef50_A7PL28 Cluster: Chromosome chr7 scaffold_20, whole geno... 32 8.9
UniRef50_A0NG23 Cluster: ENSANGP00000030675; n=1; Anopheles gamb... 32 8.9
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 170 bits (413), Expect = 2e-41
Identities = 79/85 (92%), Positives = 82/85 (96%)
Frame = +1
Query: 253 FFLGTSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 432
FFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD NGH+GLGVKCSKEVATAIRGAI
Sbjct: 96 FFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAI 155
Query: 433 ILAKLSVLPVRRGYWGNKIGKPHTV 507
ILAKLS++PVRRGYWGNKIGKPHTV
Sbjct: 156 ILAKLSIVPVRRGYWGNKIGKPHTV 180
Score = 66.1 bits (154), Expect = 6e-10
Identities = 30/42 (71%), Positives = 35/42 (83%)
Frame = +2
Query: 128 KEDQKDWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
K + K+W+PVTKLGRLV++ KI LE IYLFSLPIKE EIID
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIID 95
Score = 54.4 bits (125), Expect = 2e-06
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +3
Query: 507 PCKVTGKCGSVTVRLIPAPRGTGIV 581
PCKVTG+CGSV VRLIPAPRGTGIV
Sbjct: 181 PCKVTGRCGSVLVRLIPAPRGTGIV 205
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 157 bits (382), Expect = 1e-37
Identities = 79/105 (75%), Positives = 84/105 (80%)
Frame = +1
Query: 253 FFLGTSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 432
FFLG SL DEVLKIMPVQKQT AGQ TRFKAFV IGD NGH+GL VKCSKEVATAIRGAI
Sbjct: 36 FFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDYNGHVGLSVKCSKEVATAIRGAI 95
Query: 433 ILAKLSVLPVRRGYWGNKIGKPHTVLARSPASVVP*QSG*FLHLV 567
ILAKLS++PV RGYWGNKIGKPHTV P V S +HL+
Sbjct: 96 ILAKLSIVPVCRGYWGNKIGKPHTV----PCKVTGRCSSVLVHLI 136
Score = 53.2 bits (122), Expect = 4e-06
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = +2
Query: 149 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
+PVTKLG L+ + KI LE IYLFSLPIKE EIID
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKESEIID 35
Score = 37.9 bits (84), Expect = 0.18
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +3
Query: 507 PCKVTGKCGSVTVRLIPAP 563
PCKVTG+C SV V LIPAP
Sbjct: 121 PCKVTGRCSSVLVHLIPAP 139
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 144 bits (350), Expect = 1e-33
Identities = 61/79 (77%), Positives = 74/79 (93%)
Frame = +1
Query: 271 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 450
LNDEV+K++PVQKQTRAGQRTRFKAFV IGD++GH+GLG+KC+KEVATAIRGAII+ KLS
Sbjct: 75 LNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDSDGHVGLGIKCAKEVATAIRGAIIMGKLS 134
Query: 451 VLPVRRGYWGNKIGKPHTV 507
++P+RRGYWG +G PHTV
Sbjct: 135 IMPIRRGYWGTALGDPHTV 153
Score = 68.9 bits (161), Expect = 8e-11
Identities = 27/42 (64%), Positives = 38/42 (90%)
Frame = +2
Query: 128 KEDQKDWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
++++K+WVPVTKLGRLV+ GKI +E IYL+SLPIKE++I+D
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKEYQIVD 69
Score = 49.2 bits (112), Expect = 7e-05
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = +3
Query: 507 PCKVTGKCGSVTVRLIPAPRGTGIV 581
P KV+GKCGSVTVRL+PAPRG G+V
Sbjct: 154 PVKVSGKCGSVTVRLVPAPRGAGLV 178
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 142 bits (344), Expect = 6e-33
Identities = 67/77 (87%), Positives = 72/77 (93%)
Frame = +1
Query: 277 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 456
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 457 PVRRGYWGNKIGKPHTV 507
P+R+GYWGNKIGKP+TV
Sbjct: 108 PLRQGYWGNKIGKPNTV 124
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +3
Query: 507 PCKVTGKCGSVTVRLIPAPRGTGIV 581
PCKVTG CGSV V LIPAPRGTG+V
Sbjct: 125 PCKVTGHCGSVLVCLIPAPRGTGMV 149
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 136 bits (330), Expect = 3e-31
Identities = 64/104 (61%), Positives = 82/104 (78%), Gaps = 3/104 (2%)
Frame = +1
Query: 205 EHLLVF---FTNQRIRDH*FFLGTSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGH 375
EH+ +F +I +H F+G L DEV+KI PVQKQT AGQR RFKAFV +GD NGH
Sbjct: 69 EHIFLFSLPIKEHQIVEH--FIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGH 126
Query: 376 IGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 507
IGLGVK KEVA +I+G++ILAKL+++PVRRGYWG+K+G+PHT+
Sbjct: 127 IGLGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKLGEPHTI 170
Score = 60.9 bits (141), Expect = 2e-08
Identities = 28/41 (68%), Positives = 34/41 (82%), Gaps = 1/41 (2%)
Frame = +2
Query: 134 DQKD-WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
D KD WVP TKLGRLV++GKI LE I+LFSLPIKE +I++
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIKEHQIVE 85
Score = 46.4 bits (105), Expect = 5e-04
Identities = 21/25 (84%), Positives = 21/25 (84%)
Frame = +3
Query: 507 PCKVTGKCGSVTVRLIPAPRGTGIV 581
P KV GKCGSV VRLIPAPRG GIV
Sbjct: 171 PTKVHGKCGSVHVRLIPAPRGAGIV 195
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 129 bits (311), Expect = 6e-29
Identities = 55/83 (66%), Positives = 70/83 (84%)
Frame = +1
Query: 271 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 450
L DEV+ I PVQKQTRAGQRTRFKA V +GD+NGH+GLG+K +KEVA AIR II+AKLS
Sbjct: 76 LQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAIRAGIIIAKLS 135
Query: 451 VLPVRRGYWGNKIGKPHTVLARS 519
V+P+RRGYWG +G+PH++ ++
Sbjct: 136 VIPIRRGYWGTNLGQPHSLATKT 158
Score = 64.1 bits (149), Expect = 2e-09
Identities = 27/41 (65%), Positives = 35/41 (85%)
Frame = +2
Query: 134 DQKDWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDS 256
++K WVPVTKLGRLV+ GKI +E I+L SLP+KEF+IID+
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKEFQIIDT 71
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = +3
Query: 513 KVTGKCGSVTVRLIPAPRGTGIV 581
K TGKCGSVTVRLIPAPRG+GIV
Sbjct: 157 KTTGKCGSVTVRLIPAPRGSGIV 179
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 109 bits (261), Expect = 6e-23
Identities = 50/82 (60%), Positives = 59/82 (71%)
Frame = +1
Query: 262 GTSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 441
G S+ +EVL I VQKQTRAGQ+TR KA V +GD GH+G+G K SKE A+AIRGAI A
Sbjct: 60 GNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAASAIRGAIARA 119
Query: 442 KLSVLPVRRGYWGNKIGKPHTV 507
K ++ PVR G W GKPHTV
Sbjct: 120 KCAIRPVRLGLWDGAQGKPHTV 141
Score = 44.4 bits (100), Expect = 0.002
Identities = 19/42 (45%), Positives = 30/42 (71%)
Frame = +2
Query: 128 KEDQKDWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
++++ +W+P T +GRLV+ KI LE I+ FS I+E EI+D
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIREPEIVD 56
Score = 41.9 bits (94), Expect = 0.011
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +3
Query: 510 CKVTGKCGSVTVRLIPAPRGTGIV 581
CK +GKCG+ V++IPAPRGTGI+
Sbjct: 143 CKGSGKCGTSVVQVIPAPRGTGII 166
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 107 bits (257), Expect = 2e-22
Identities = 48/60 (80%), Positives = 54/60 (90%)
Frame = +1
Query: 328 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 507
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWGN+I KPHTV
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEIRKPHTV 120
Score = 50.8 bits (116), Expect = 2e-05
Identities = 25/40 (62%), Positives = 28/40 (70%)
Frame = +3
Query: 462 PKRLLG*QDRKATHRPCKVTGKCGSVTVRLIPAPRGTGIV 581
P+ G + RK P KVTG+CGSV VRLIPAPRGTG V
Sbjct: 106 PRGYWGNEIRKPHTVPGKVTGRCGSVLVRLIPAPRGTGFV 145
Score = 32.3 bits (70), Expect = 8.9
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +2
Query: 134 DQKDWVPVTKLGRLVREGKI 193
+ K+W+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 86.6 bits (205), Expect = 4e-16
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = +1
Query: 253 FFLGTSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 384
FFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD NGH+GL
Sbjct: 71 FFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGL 114
Score = 66.9 bits (156), Expect = 3e-10
Identities = 30/42 (71%), Positives = 35/42 (83%)
Frame = +2
Query: 128 KEDQKDWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
K + K+W+PVTKLGRLV++ KI LE IYLFSLPIKE EIID
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIID 70
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 79.8 bits (188), Expect = 4e-14
Identities = 46/87 (52%), Positives = 56/87 (64%)
Frame = +1
Query: 256 FLGTSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 435
FLG +L DEVLK +P QK TR GQ +KA GD NGH+ G+ EVA I+ II
Sbjct: 85 FLGAALKDEVLKSLPEQKGTRVGQY--YKA----GDYNGHVITGLD---EVANTIQRVII 135
Query: 436 LAKLSVLPVRRGYWGNKIGKPHTVLAR 516
L KL ++PV RGY G+K KPHTVL +
Sbjct: 136 LTKLPIVPVWRGYCGSKTSKPHTVLCK 162
Score = 41.9 bits (94), Expect = 0.011
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +2
Query: 152 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
P +KLG LV++ +I L IYLFSLPIKE EIID
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKETEIID 83
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 77.8 bits (183), Expect = 2e-13
Identities = 42/77 (54%), Positives = 51/77 (66%)
Frame = +1
Query: 286 LKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVR 465
++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGAIIL + S+
Sbjct: 13 IRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGAIILDRSSIAIAW 66
Query: 466 RGYWGNKIGKPHTVLAR 516
G+ GNKI KPHTV R
Sbjct: 67 GGWSGNKIAKPHTVSCR 83
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 77.0 bits (181), Expect = 3e-13
Identities = 36/97 (37%), Positives = 62/97 (63%)
Frame = +1
Query: 217 VFFTNQRIRDH*FFLGTSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKC 396
+FF N ++ + G SL +V++ + V + T++G++ + K V +GD +GH+GLGVK
Sbjct: 92 IFFHNNKLVN--ILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHVGLGVKS 149
Query: 397 SKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 507
S + I+ A+ AKL++ +RRGYW + GKP+T+
Sbjct: 150 SMDSKAGIKAALRKAKLAITKIRRGYWEIEEGKPNTI 186
Score = 34.7 bits (76), Expect = 1.7
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3
Query: 513 KVTGKCGSVTVRLIPAPRGTGIV 581
K +GK GSV V + PAP+GTGIV
Sbjct: 189 KTSGKAGSVVVCIKPAPKGTGIV 211
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 74.9 bits (176), Expect = 1e-12
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = +1
Query: 253 FFLGTSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 381
FFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D NG+ G
Sbjct: 24 FFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDYNGYAG 66
Score = 37.9 bits (84), Expect = 0.18
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +2
Query: 188 KIDKLESIYLFSLPIKEFEIID 253
KI LE IYLFSLPIKE EIID
Sbjct: 2 KIKSLEEIYLFSLPIKESEIID 23
Score = 37.9 bits (84), Expect = 0.18
Identities = 21/50 (42%), Positives = 26/50 (52%)
Frame = +3
Query: 360 RQQRSYWFGCEVQQGSRHCHSRRYYPC*AVSSTSPKRLLG*QDRKATHRP 509
R Y EV QG H R ++P A+ +RLLG QDR+A HRP
Sbjct: 59 RDYNGYAGRVEVLQGGGRRHPRGHHPDQALHCHRAQRLLGEQDRQAPHRP 108
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 74.1 bits (174), Expect = 2e-12
Identities = 39/84 (46%), Positives = 56/84 (66%)
Frame = -1
Query: 504 GVWLSYLVTPVTSSDW*N*QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCAL 325
GV + LVTPV S+ N QL +D+S ++G G FLAAL QT++ V V +G++ LE L
Sbjct: 23 GVGFTDLVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGLEARTL 82
Query: 324 SGTCLFLYRHDLKNLIIQGRAEEE 253
+GT L L HDL++ ++Q A+EE
Sbjct: 83 TGTGLLLDGHDLQHFVLQRAAQEE 106
Score = 35.5 bits (78), Expect = 0.96
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -3
Query: 253 INDLEFFDW*RKQVNALEFVDFSFANKTAEFGDRNPIFLVFL 128
I+DLE F+ R QV+ L+ D + A++ + G NP VFL
Sbjct: 107 IDDLELFNGQRVQVDLLQGADLAIAHQATQLGHWNPFLRVFL 148
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 72.5 bits (170), Expect = 7e-12
Identities = 37/78 (47%), Positives = 55/78 (70%)
Frame = -1
Query: 504 GVWLSYLVTPVTSSDW*N*QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCAL 325
GV L+ + TPVTSSDW N QL D++ S+G+ +FL+ L+TQT++TV V N + LE+ +L
Sbjct: 104 GVRLTQVGTPVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTDVTVGVTNDDDSLESGSL 163
Query: 324 SGTCLFLYRHDLKNLIIQ 271
+ + L L R D+ N I+Q
Sbjct: 164 TSSGLLLDRLDVHNFILQ 181
Score = 32.3 bits (70), Expect = 8.9
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = -3
Query: 253 INDLEFFDW*RKQVNALEFVDFSFANKTAEFGDRNP--IFLV 134
+NDLEF DW R Q + + D + +++ + G+ NP FLV
Sbjct: 187 VNDLEFLDWQRVQEDFFDGRDLAGLHQSTQLGNWNPTLFFLV 228
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 70.9 bits (166), Expect = 2e-11
Identities = 35/81 (43%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Frame = +1
Query: 271 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 450
L ++VL + VQ+ ++G+R R++A V +G+ NG++G+G+ SKEV AIR AI AKLS
Sbjct: 57 LEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLS 116
Query: 451 VLPVR--RGYWGNKIGKPHTV 507
++ VR G W G PH++
Sbjct: 117 LIKVRVGCGSWECGCGSPHSI 137
Score = 37.1 bits (82), Expect = 0.31
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +2
Query: 128 KEDQKDWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDS 256
K + + W P T++GR+V+EG I + I LP+ E EI+D+
Sbjct: 10 KFNTEAWEPKTQIGRMVKEGTISDISYIMDKGLPLLEPEIVDA 52
Score = 36.7 bits (81), Expect = 0.41
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +3
Query: 507 PCKVTGKCGSVTVRLIPAPRGTGIV 581
P G CGSV V L+PAPRG G+V
Sbjct: 138 PFTAKGACGSVKVELLPAPRGVGLV 162
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 68.9 bits (161), Expect = 8e-11
Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Frame = +1
Query: 274 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 453
N EVL I + T +G+R RF+ A+G+ +G++GLG+ KEV AIR AI AKL++
Sbjct: 62 NQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEVGIAIRKAINYAKLNI 121
Query: 454 LPVRR--GYWGNKIGKPHTV 507
+ ++R G W + +PH+V
Sbjct: 122 IEIKRGCGSWECRCRRPHSV 141
Score = 39.5 bits (88), Expect = 0.059
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +2
Query: 143 DWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
+W P TKLG +V+EG+I + I+ IKE EIID
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIKEPEIID 51
Score = 37.5 bits (83), Expect = 0.24
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +3
Query: 507 PCKVTGKCGSVTVRLIPAPRGTGIVV 584
P V GK GSV VRLIP PRG G+V+
Sbjct: 142 PFAVEGKEGSVRVRLIPGPRGLGLVI 167
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 68.5 bits (160), Expect = 1e-10
Identities = 38/63 (60%), Positives = 47/63 (74%)
Frame = +1
Query: 235 RIRDH*FFLGTSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVAT 414
+I DH FL T L +E L I PVQKQT AGQ+TRFKA+V +GD++ HIGLG K +KEV
Sbjct: 96 QIVDH--FLKT-LKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQG 152
Query: 415 AIR 423
AI+
Sbjct: 153 AIQ 155
Score = 60.9 bits (141), Expect = 2e-08
Identities = 24/39 (61%), Positives = 35/39 (89%)
Frame = +2
Query: 137 QKDWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
+++WVP+TKLGRLV+ GKI LE+I+ FS+PIKE++I+D
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQIVD 99
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 66.9 bits (156), Expect = 3e-10
Identities = 30/42 (71%), Positives = 35/42 (83%)
Frame = +2
Query: 128 KEDQKDWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
K + K+W+PVTKLGRLV++ KI LE IYLFSLPIKE EIID
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIID 95
Score = 60.5 bits (140), Expect = 3e-08
Identities = 28/30 (93%), Positives = 28/30 (93%)
Frame = +1
Query: 253 FFLGTSLNDEVLKIMPVQKQTRAGQRTRFK 342
FFLG SL DEVLKIMPVQKQTRAGQRTRFK
Sbjct: 96 FFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/33 (69%), Positives = 24/33 (72%)
Frame = +3
Query: 483 QDRKATHRPCKVTGKCGSVTVRLIPAPRGTGIV 581
Q R KVTG+CGSV VRLIPAPRGTGIV
Sbjct: 115 QTRAGQRTRFKVTGRCGSVLVRLIPAPRGTGIV 147
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 66.5 bits (155), Expect = 4e-10
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 FLGTSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 435
+L L DEV+ I Q+ T +G+R + +G+ NG++G+G +KE A AI+ AI
Sbjct: 41 YLIPDLKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAKEAAPAIKKAID 100
Query: 436 LAKLSVLPVRR--GYWGNKIGKPHTV 507
AKL+++ ++R G W GKPHT+
Sbjct: 101 NAKLNIIEIKRGCGSWECGCGKPHTL 126
Score = 40.7 bits (91), Expect = 0.025
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +2
Query: 140 KDWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
++W P T+LGRLV G+I + LP+KE++I+D
Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHSKLPLKEYQIVD 40
Score = 33.5 bits (73), Expect = 3.9
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +3
Query: 507 PCKVTGKCGSVTVRLIPAPRGTGIVV 584
P V GK GSV+V L PAP+G G+ V
Sbjct: 127 PFLVNGKSGSVSVTLKPAPQGVGLAV 152
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 66.5 bits (155), Expect = 4e-10
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Frame = +1
Query: 271 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 450
L DEVL I VQ+ T +G+R +F+ VA+G+ +G IG +V AI+ AI +AKL+
Sbjct: 48 LEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIGYAEGRDDQVGGAIQKAIDIAKLN 107
Query: 451 VLPVRR--GYWGNKIGKPHTVLARS 519
++ V R G W G+PHTV R+
Sbjct: 108 IIDVSRGCGSWECGCGRPHTVALRT 132
Score = 39.5 bits (88), Expect = 0.059
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +2
Query: 146 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
W P T+LG+ V EG+ID ++ LP+KE E++D
Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKESEVVD 42
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 65.7 bits (153), Expect = 8e-10
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +1
Query: 304 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 447
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQL 48
Score = 37.9 bits (84), Expect = 0.18
Identities = 18/23 (78%), Positives = 18/23 (78%)
Frame = +3
Query: 513 KVTGKCGSVTVRLIPAPRGTGIV 581
KVT GSV V LIPAPRGTGIV
Sbjct: 62 KVTSHYGSVLVHLIPAPRGTGIV 84
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 65.7 bits (153), Expect = 8e-10
Identities = 33/81 (40%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Frame = +1
Query: 271 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 450
L EV+ I VQKQT AG+ +R+K V +G+ +G++ +G +K++ AI+ AI AK++
Sbjct: 54 LKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKAKQLRVAIQKAIRDAKMN 113
Query: 451 VLPVRR--GYWGNKIGKPHTV 507
++PVRR G W G+PH++
Sbjct: 114 IIPVRRGCGSWQCTCGEPHSL 134
Score = 41.5 bits (93), Expect = 0.015
Identities = 17/38 (44%), Positives = 27/38 (71%)
Frame = +2
Query: 140 KDWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
++W P T +G LV+EGKI ++ ++ +LPI E EI+D
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLPITEPEIVD 48
Score = 41.5 bits (93), Expect = 0.015
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +3
Query: 507 PCKVTGKCGSVTVRLIPAPRGTGIVV 584
P KV GK GSV V L+PAP+GTG+VV
Sbjct: 135 PFKVVGKAGSVEVDLLPAPKGTGLVV 160
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 65.3 bits (152), Expect = 1e-09
Identities = 29/67 (43%), Positives = 47/67 (70%)
Frame = +1
Query: 271 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 450
L+D+VL + +Q+ T +G+R RF +G+++G++GL + KEVA+ IR AI AKL+
Sbjct: 33 LDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGLAICKGKEVASTIRKAIDKAKLN 92
Query: 451 VLPVRRG 471
++PV RG
Sbjct: 93 MIPVMRG 99
Score = 37.1 bits (82), Expect = 0.31
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +3
Query: 498 THRPCKVTGKCGSVTVRLIPAPRGTGIVV 584
T P K+TG+ GS V L+PAP G G+VV
Sbjct: 111 TSVPLKITGRSGSTRVTLMPAPAGKGLVV 139
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 62.1 bits (144), Expect = 1e-08
Identities = 41/83 (49%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +1
Query: 253 FFLGTSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 432
FFL SL D+VLKI+P+ + R Q TRF +F I + GH G+GVKCSK+V TA+ +
Sbjct: 28 FFLEASLKDKVLKIIPLSR-FRNDQWTRFNSFDTI-NYGGHNGIGVKCSKKVGTAVGLSS 85
Query: 433 ILAKL-SVLPVRRGYWGNKIGKP 498
+ L S LP R Y GN I KP
Sbjct: 86 WSSFLSSCLP--RDYCGNNIRKP 106
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 60.9 bits (141), Expect = 2e-08
Identities = 39/85 (45%), Positives = 46/85 (54%)
Frame = +1
Query: 253 FFLGTSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 432
FFLG L DEVL+ M Q Q RTR K F + + L V CSKEV TA + AI
Sbjct: 55 FFLGEHLKDEVLRTMLAQNQ-----RTRIKVFFFLTIRSPMTTL-VNCSKEVGTAAQRAI 108
Query: 433 ILAKLSVLPVRRGYWGNKIGKPHTV 507
L + + GY GNKIG PHT+
Sbjct: 109 TLLSF-LFSTQTGYKGNKIGNPHTI 132
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 60.9 bits (141), Expect = 2e-08
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Frame = +1
Query: 271 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 450
L EV+ + +QK T GQ TRFKA VA G+ NG++G+G SK++ AI A A L+
Sbjct: 87 LKSEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGIGQGKSKQMRIAIEKATNAAYLN 146
Query: 451 VLPVRR--GYWGNKIGKPHTV 507
V P++ G W + + H+V
Sbjct: 147 VNPIKMGCGSWECRCDQKHSV 167
Score = 39.9 bits (89), Expect = 0.044
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +3
Query: 507 PCKVTGKCGSVTVRLIPAPRGTGIV 581
P KV GK GSVT+ +IPAPRG G+V
Sbjct: 168 PFKVKGKGGSVTIEIIPAPRGLGLV 192
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 60.5 bits (140), Expect = 3e-08
Identities = 31/67 (46%), Positives = 43/67 (64%)
Frame = +1
Query: 253 FFLGTSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 432
F LG L D+VLK+M VQKQ +AG+R RFK V I D N ++ LGV+ KE+ A+
Sbjct: 157 FLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVTIRDCNDNVSLGVEWPKELLIAVCRTN 216
Query: 433 ILAKLSV 453
+L+ + V
Sbjct: 217 VLSIILV 223
Score = 33.1 bits (72), Expect = 5.1
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +2
Query: 176 VREGKIDKLESIYLFSLPIKEFEIID 253
V++ K+ L+ +YLFSLPIKEFE+ D
Sbjct: 132 VKDMKMKSLK-VYLFSLPIKEFEVTD 156
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 60.1 bits (139), Expect = 4e-08
Identities = 27/42 (64%), Positives = 32/42 (76%)
Frame = +2
Query: 128 KEDQKDWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
K + K+W+P TKLG LV++ KI LE IYLFSLPIK EIID
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGSEIID 95
Score = 53.2 bits (122), Expect = 4e-06
Identities = 25/30 (83%), Positives = 26/30 (86%)
Frame = +1
Query: 253 FFLGTSLNDEVLKIMPVQKQTRAGQRTRFK 342
FFLG SL +EVLK MPVQKQTRAGQ TRFK
Sbjct: 96 FFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
Score = 43.2 bits (97), Expect = 0.005
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = +3
Query: 513 KVTGKCGSVTVRLIPAPRGTGIV 581
KVTG+CGSV VRL APRGTGIV
Sbjct: 125 KVTGRCGSVLVRLFSAPRGTGIV 147
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 58.0 bits (134), Expect = 2e-07
Identities = 35/73 (47%), Positives = 46/73 (63%)
Frame = +1
Query: 298 PVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYW 477
P+ KQT Q+TRFKA V +G + GH+ LG+K S EV AIILAKLS++PV
Sbjct: 95 PLIKQTCTDQQTRFKASVTVG-SYGHVSLGIKYSMEV------AIILAKLSIIPVETATG 147
Query: 478 GNKIGKPHTVLAR 516
G ++ +PH V R
Sbjct: 148 GKRL-EPHMVPCR 159
Score = 48.0 bits (109), Expect = 2e-04
Identities = 19/25 (76%), Positives = 22/25 (88%)
Frame = +3
Query: 507 PCKVTGKCGSVTVRLIPAPRGTGIV 581
PC+VTG+CGS+ V LIPAPRGTG V
Sbjct: 157 PCRVTGRCGSLLVHLIPAPRGTGTV 181
Score = 42.3 bits (95), Expect = 0.008
Identities = 22/48 (45%), Positives = 29/48 (60%)
Frame = +2
Query: 128 KEDQKDWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDSSSARP 271
+ED+ W+P+TKLG LV+E KI LE IY FSL + + S P
Sbjct: 50 REDK--WLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEHP 95
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 57.6 bits (133), Expect = 2e-07
Identities = 28/67 (41%), Positives = 44/67 (65%)
Frame = +1
Query: 271 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 450
L DEVL I VQ+ T +G+R +F+ VA+G+ +G++G +V AI+ AI +AKL+
Sbjct: 99 LEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLGYAQARDDQVGGAIQKAIDVAKLN 158
Query: 451 VLPVRRG 471
++ V RG
Sbjct: 159 IIEVDRG 165
Score = 38.3 bits (85), Expect = 0.14
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +2
Query: 146 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
W P T+LGR V+ G I +E LP+KE EI+D
Sbjct: 58 WEPRTRLGRKVQNGDISSMEQALDSGLPLKEAEIVD 93
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 57.2 bits (132), Expect = 3e-07
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +2
Query: 128 KEDQKDWVPVTKLGRLVREGKIDKLESIYLFSLPIK 235
K + K+W+PVTKLGRLV++ KI LE IYLFSLPIK
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 57.2 bits (132), Expect = 3e-07
Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Frame = +1
Query: 271 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 450
L EV+ + +QK T GQ TRFKA VA G+ NG++G+G +K++ AI A A L+
Sbjct: 68 LKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQALLN 127
Query: 451 VLPVRR--GYWGNKIGKPHTV 507
V P++ G W + + H+V
Sbjct: 128 VGPIKLGCGSWECRCDQKHSV 148
Score = 37.1 bits (82), Expect = 0.31
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3
Query: 507 PCKVTGKCGSVTVRLIPAPRGTGIV 581
P KV GK GSV + ++PAPRG G+V
Sbjct: 149 PFKVRGKGGSVVIEILPAPRGLGLV 173
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 56.0 bits (129), Expect = 6e-07
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = +1
Query: 304 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYW 477
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL+++ V R G W
Sbjct: 72 QKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVARGCGSW 131
Query: 478 GNKIGKPHTV 507
G PH++
Sbjct: 132 ECACGAPHSI 141
Score = 42.3 bits (95), Expect = 0.008
Identities = 19/38 (50%), Positives = 26/38 (68%)
Frame = +2
Query: 140 KDWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
++W P TKLGRLV+EGKI ++ I I+E EI+D
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEILSNKYVIREPEIVD 42
Score = 33.9 bits (74), Expect = 2.9
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +3
Query: 507 PCKVTGKCGSVTVRLIPAPRGTGIV 581
P +V GK GSV V L PAP+G GIV
Sbjct: 142 PYQVEGKSGSVRVILKPAPKGVGIV 166
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 54.4 bits (125), Expect = 2e-06
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +2
Query: 146 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
W PVTKLGRLV++GK+ ++ I+ F + IKEFEI+D
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIKEFEIVD 70
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 53.6 bits (123), Expect = 3e-06
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Frame = +1
Query: 262 GTSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 441
G ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 442 KLSVL--PVRRGY 474
K + + P+ + Y
Sbjct: 128 KKTAITVPITKDY 140
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 53.2 bits (122), Expect = 4e-06
Identities = 32/56 (57%), Positives = 36/56 (64%)
Frame = +1
Query: 253 FFLGTSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 420
FFL TSL DE IMPVQ QT R FK FV+I D + H+ L KCSK+ ATAI
Sbjct: 95 FFLRTSLRDE---IMPVQTQTWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKTATAI 146
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 52.8 bits (121), Expect = 6e-06
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +1
Query: 271 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 450
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 451 VLPV 462
++ V
Sbjct: 72 LISV 75
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 52.0 bits (119), Expect = 1e-05
Identities = 26/68 (38%), Positives = 41/68 (60%)
Frame = +1
Query: 265 TSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 444
++ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 47 SNFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNAN 106
Query: 445 LSVLPVRR 468
+++ V++
Sbjct: 107 NNLIKVKQ 114
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 51.2 bits (117), Expect = 2e-05
Identities = 32/86 (37%), Positives = 44/86 (51%)
Frame = +1
Query: 271 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 450
L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 15 LEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAKKQ 74
Query: 451 VLPVRRGYWGNKIGKPHTVLARSPAS 528
+ VR G I PH + R AS
Sbjct: 75 L--VRIPITGTTI--PHDTIGRFGAS 96
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/67 (35%), Positives = 39/67 (58%)
Frame = +1
Query: 265 TSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 444
T L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK
Sbjct: 76 TGLEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAK 135
Query: 445 LSVLPVR 465
++ V+
Sbjct: 136 NNMYKVK 142
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 50.8 bits (116), Expect = 2e-05
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Frame = +1
Query: 277 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV- 453
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK ++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 454 -LPVRRGYWGNKIGKPHTVLARSPASVV 534
+PV G PH V+ R AS V
Sbjct: 77 EVPVING------TIPHEVIGRQDASKV 98
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 50.0 bits (114), Expect = 4e-05
Identities = 28/62 (45%), Positives = 37/62 (59%)
Frame = +1
Query: 253 FFLGTSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 432
F L L D+VLK+M V+KQ AG+ RFK V I N ++ LGV+ KE+ A+ I
Sbjct: 23 FLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLGVERPKELLIAVCRTI 82
Query: 433 IL 438
IL
Sbjct: 83 IL 84
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 49.2 bits (112), Expect = 7e-05
Identities = 22/67 (32%), Positives = 41/67 (61%)
Frame = +1
Query: 262 GTSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 441
G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A++ A
Sbjct: 510 GENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRALVDA 569
Query: 442 KLSVLPV 462
K SV+ V
Sbjct: 570 KKSVVRV 576
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +1
Query: 277 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 456
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 457 PV 462
+
Sbjct: 71 KI 72
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 48.4 bits (110), Expect = 1e-04
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Frame = +1
Query: 157 HQTRPSCSRRKNRQTREHLLVFFT--NQRIRDH*FFLGTSLNDEVLKIMPVQKQTRAGQR 330
++T + N QT+ F N+R + F ++V+ I V K T+ G+
Sbjct: 3 NKTEVVVAENANNQTQPERKKFDRKPNRRPQGPKQFQKDDFEEKVVTIRRVTKVTKGGRH 62
Query: 331 TRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 462
RF A V +GD G +GLG + EV AI+ A+ AK +++ V
Sbjct: 63 FRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVKEAKKNLIRV 106
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 48.0 bits (109), Expect = 2e-04
Identities = 19/39 (48%), Positives = 30/39 (76%)
Frame = +2
Query: 152 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDSSSAR 268
PVTKLGRLV++GK+ ++ I+ F + IKE++I+D +R
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIKEYQIVDHLLSR 74
Score = 45.6 bits (103), Expect = 9e-04
Identities = 26/50 (52%), Positives = 32/50 (64%)
Frame = +1
Query: 235 RIRDH*FFLGTSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 384
+I DH L + L +EV+ I VQKQT G+ R KA VAIGD+NGH L
Sbjct: 66 QIVDH---LLSRLKEEVMTIDQVQKQTSRGKEPRLKASVAIGDHNGHRAL 112
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Frame = +1
Query: 265 TSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 444
+ +++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+
Sbjct: 15 SEFEEKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVAR 74
Query: 445 LSVL--PVRRG 471
+++ PV G
Sbjct: 75 KNMITVPVENG 85
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 47.2 bits (107), Expect = 3e-04
Identities = 19/62 (30%), Positives = 40/62 (64%)
Frame = +1
Query: 277 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 456
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 457 PV 462
V
Sbjct: 209 QV 210
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 46.8 bits (106), Expect = 4e-04
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +1
Query: 265 TSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 444
T + V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+
Sbjct: 64 TEFQERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDAR 123
Query: 445 LSVLPVRRGYWGNKIGK-PHTVLARSPASVV 534
+++ V NKI PH + S A+ V
Sbjct: 124 KALIRVPL----NKINSIPHPMSGSSGAANV 150
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 46.0 bits (104), Expect = 7e-04
Identities = 28/81 (34%), Positives = 45/81 (55%)
Frame = +1
Query: 274 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 453
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 454 LPVRRGYWGNKIGKPHTVLAR 516
V+ + G+ I PH V+ +
Sbjct: 91 --VKINFKGHTI--PHEVIGK 107
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 46.0 bits (104), Expect = 7e-04
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +1
Query: 277 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 429
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKA 78
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 45.6 bits (103), Expect = 9e-04
Identities = 19/62 (30%), Positives = 38/62 (61%)
Frame = +1
Query: 277 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 456
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 457 PV 462
V
Sbjct: 246 TV 247
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 45.6 bits (103), Expect = 9e-04
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = +1
Query: 229 NQRIRDH*FFLGTSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 408
N+R +H G L D V+ I V K + G+ F A V +GD NG +G+G S+EV
Sbjct: 35 NRREENH----GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREV 90
Query: 409 ATAIRGAIILAKLSVLPVRR 468
AI + AK + V R
Sbjct: 91 PAAIAKGQLDAKKHMFSVPR 110
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 45.2 bits (102), Expect = 0.001
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +1
Query: 262 GTSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 441
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 442 KLSVL--PVRRG 471
K +++ P+R G
Sbjct: 116 KKTMIRVPLREG 127
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 44.4 bits (100), Expect = 0.002
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +1
Query: 277 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 450
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 451 VLPVRRG 471
+P+R G
Sbjct: 84 FVPLRGG 90
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 43.2 bits (97), Expect = 0.005
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +1
Query: 271 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 450
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 451 VLPV 462
V+ V
Sbjct: 88 VIRV 91
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 42.7 bits (96), Expect = 0.006
Identities = 19/66 (28%), Positives = 37/66 (56%)
Frame = +1
Query: 265 TSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 444
T+ + V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K
Sbjct: 15 TNWQERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGK 74
Query: 445 LSVLPV 462
++ V
Sbjct: 75 KQLIEV 80
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 42.7 bits (96), Expect = 0.006
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +1
Query: 277 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 456
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 457 PV 462
V
Sbjct: 104 RV 105
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 42.3 bits (95), Expect = 0.008
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = +3
Query: 510 CKVTGKCGSVTVRLIPAPRGTGI 578
CKVTG CGSV V LIPA RGTGI
Sbjct: 18 CKVTGCCGSVLVHLIPAHRGTGI 40
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 41.1 bits (92), Expect = 0.019
Identities = 23/40 (57%), Positives = 26/40 (65%)
Frame = -1
Query: 252 SMISNSLIGKENK*MLSSLSIFPSRTRRPSLVTGTQSFWS 133
SMI NSL GKE K + S + I P+ T PSLVTGT F S
Sbjct: 14 SMIWNSLTGKECKKISSMVVILPALTNLPSLVTGTHPFSS 53
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 41.1 bits (92), Expect = 0.019
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +1
Query: 271 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 444
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERAR 73
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 39.1 bits (87), Expect = 0.078
Identities = 23/80 (28%), Positives = 40/80 (50%)
Frame = +1
Query: 271 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 450
L ++VL + K + G++ F A + +GD G +G G + E+ AIR A+ +
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIRKGGEAARKN 72
Query: 451 VLPVRRGYWGNKIGKPHTVL 510
++ + G+ I PH VL
Sbjct: 73 LITI-ESLEGDSI--PHEVL 89
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 37.9 bits (84), Expect = 0.18
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +1
Query: 265 TSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 423
+ L ++V+ I K + G+R F A +GD NG +G+G + EV AI+
Sbjct: 69 SGLVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIK 121
>UniRef50_Q86AL0 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Homeobox-containing protein; n=2; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Homeobox-containing protein - Dictyostelium
discoideum (Slime mold)
Length = 766
Score = 37.9 bits (84), Expect = 0.18
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 6/132 (4%)
Frame = -1
Query: 594 NWRRPQYQYHEVQELAGLLRNHTCR*PCKDGVWLSYLVTPVTSSDW*N*QLSKDNSASNG 415
NW+ + ++E + + ++ NH CR + G+ L + T + + N ++ SA+
Sbjct: 627 NWKIFKQLFNENKTMKKVVFNHWCR--FRGGI-LKFPKDKQTPNTY-NKEIGSLFSANGS 682
Query: 414 SGDFLAALHTQTNMTV-VVANGNK---CLETCALSGTCLF-LYRHDLKNLIIQ-GRAEEE 253
+FL T T + ++++GNK C ET A+ TC F Y DL LI Q E
Sbjct: 683 IKNFLMWSSTTTQVIEEILSSGNKTITCFETSAIDNTCNFDKYLLDLNRLINQYQHIERF 742
Query: 252 SMISNSLIGKEN 217
I N+ I +N
Sbjct: 743 DFIKNTYIYAKN 754
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 37.5 bits (83), Expect = 0.24
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 301 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 468
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR 405
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 37.5 bits (83), Expect = 0.24
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +1
Query: 271 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 450
L ++L V QTR G+ + +G+ NG IGLG S + A+ A ++A +
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 451 VLPVRR 468
++P+RR
Sbjct: 310 MVPIRR 315
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 37.5 bits (83), Expect = 0.24
Identities = 27/86 (31%), Positives = 43/86 (50%)
Frame = +1
Query: 277 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 456
++++ I V + G+R F A V +GD G +G G + EV AI+ A+ A+ +++
Sbjct: 91 EKIVNIARVTNVVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLI 150
Query: 457 PVRRGYWGNKIGKPHTVLARSPASVV 534
V NK PH A+ AS V
Sbjct: 151 RVP---IINKSTVPHEQWAKFLASKV 173
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.31
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -1
Query: 432 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 334
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 36.7 bits (81), Expect = 0.41
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = -3
Query: 577 IPVPRGAGISRTVTEPHLPVTLQGRCVA 494
+PVP GAG+ T TEP P+TL G C A
Sbjct: 44 MPVPMGAGMKSTRTEPQWPITLCGLCGA 71
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 36.7 bits (81), Expect = 0.41
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +1
Query: 271 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 450
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 451 VLPV 462
++ V
Sbjct: 81 MVRV 84
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 36.3 bits (80), Expect = 0.55
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 265 TSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 423
+ ++ V+ I K + G+ F A V +GD G +G G + EV+ AIR
Sbjct: 13 SEFDESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIR 65
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 35.9 bits (79), Expect = 0.72
Identities = 22/83 (26%), Positives = 44/83 (53%)
Frame = +1
Query: 208 HLLVFFTNQRIRDH*FFLGTSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLG 387
++ + N ++ + L ++ +++++I + + G+ R+K + +G+ G IGLG
Sbjct: 77 YIYKYNNNIKLNNSIIKLNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLG 136
Query: 388 VKCSKEVATAIRGAIILAKLSVL 456
V SK + I AII AK+ L
Sbjct: 137 V--SKNI--NINKAIISAKIKAL 155
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 35.9 bits (79), Expect = 0.72
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +1
Query: 283 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 462
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
>UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n=5;
Bacteria|Rep: Ribosomal protein S2-related protein -
Deinococcus radiodurans
Length = 472
Score = 35.5 bits (78), Expect = 0.96
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +1
Query: 340 KAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV--LA 513
++ V IG + H G + +++VA A+RG + L V GYW + G + +A
Sbjct: 2 RSLVLIGHGSHHHGESARATQQVAEALRGRGLAGHLPYDEVLEGYWQQEPGLRQVLRTVA 61
Query: 514 RSPASVVP 537
S +VVP
Sbjct: 62 YSDVTVVP 69
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 35.5 bits (78), Expect = 0.96
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +1
Query: 301 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 468
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR 378
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 35.1 bits (77), Expect = 1.3
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +1
Query: 268 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 447
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A +LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 448 SVLPVRR 468
++ P+RR
Sbjct: 302 NMRPIRR 308
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 35.1 bits (77), Expect = 1.3
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 256 FLGTSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 420
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 34.3 bits (75), Expect = 2.2
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +1
Query: 268 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 447
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 448 SVLPVRR 468
++ PV R
Sbjct: 314 NMQPVPR 320
>UniRef50_Q60846 Cluster: Tumor necrosis factor receptor superfamily
member 8 precursor; n=5; Murinae|Rep: Tumor necrosis
factor receptor superfamily member 8 precursor - Mus
musculus (Mouse)
Length = 498
Score = 33.9 bits (74), Expect = 2.9
Identities = 27/74 (36%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = -3
Query: 580 TIPVPRGAGISRTVTEPHLPVTLQGRCVAFLSCYPSNLFGLVELTA*QG-**RL-EWQWR 407
T P PRG R P V G+C A ++C P GLVE G R+ E Q
Sbjct: 55 TQPCPRGPAHCRKQCAPDYYVNEDGKCTACVTCLP----GLVEKAPCSGNSPRICECQPG 110
Query: 406 LPCCTSHPNQYDRC 365
+ CCT N RC
Sbjct: 111 MHCCTPAVNSCARC 124
>UniRef50_Q74BQ5 Cluster: Glycosyl transferase domain protein; n=3;
Desulfuromonadales|Rep: Glycosyl transferase domain
protein - Geobacter sulfurreducens
Length = 402
Score = 33.5 bits (73), Expect = 3.9
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +2
Query: 137 QKDWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDSSSARP*MMRFLRSCL--YRN 310
QKD VTKLGR +R+ +ID++ +Y ++ I + ++ RP + L+ + Y
Sbjct: 283 QKDDPRVTKLGRFLRKSRIDEIPQLY--NVLIGDMSLVGPRPERPEFVEQLKKVIPYYSE 340
Query: 311 KH 316
+H
Sbjct: 341 RH 342
>UniRef50_Q9NQ11 Cluster: Probable cation-transporting ATPase 13A2;
n=23; Euteleostomi|Rep: Probable cation-transporting
ATPase 13A2 - Homo sapiens (Human)
Length = 1180
Score = 33.5 bits (73), Expect = 3.9
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -2
Query: 203 RVCRFFLREQDGRVW*QEPNLSGLPCRANDHGRDHDRVHEDRHGIYLH-RVIRK 45
RV R++L + +W E + DHGR D VH RHG+ L +++RK
Sbjct: 161 RVLRYYLFQGQRYIW-IETQQAFYQVSLLDHGRSCDDVHRSRHGLSLQDQMVRK 213
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 5.1
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 283 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 429
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
>UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma
gondii|Rep: Ribosomal protein S5 - Toxoplasma gondii
Length = 268
Score = 32.7 bits (71), Expect = 6.7
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Frame = +1
Query: 280 EVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA--KL-- 447
++++I + K + G+ RFK + IG N IG+GV + AI A A K+
Sbjct: 134 KIIEIKKISKTKQKGRIRRFKVLLLIGAKNAWIGIGVSKDFYLQEAINKARFFAFKKIYF 193
Query: 448 -SVLPVRRGYWGNKIGKPHTVLARSP 522
++ + Y+ N I K ++ P
Sbjct: 194 FYIILEKLFYYSNTINKIKCIIIYKP 219
>UniRef50_Q9RY83 Cluster: Putative uncharacterized protein; n=2;
Deinococcus|Rep: Putative uncharacterized protein -
Deinococcus radiodurans
Length = 309
Score = 32.3 bits (70), Expect = 8.9
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = -2
Query: 545 DCYGTTLAGDLARTVCGFPILLPQ*PLRTGRTDSL 441
D +G L+ L R + G PILLP P RTG D+L
Sbjct: 80 DAWGEALSELLPRRISGLPILLPV-PERTGELDAL 113
>UniRef50_A6DTI5 Cluster: Probable sulfatase; n=1; Lentisphaera
araneosa HTCC2155|Rep: Probable sulfatase - Lentisphaera
araneosa HTCC2155
Length = 483
Score = 32.3 bits (70), Expect = 8.9
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +2
Query: 131 EDQKDWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDSSSARP*MMRFLRSCLYRN 310
+D K W+PV L +L EGK++ L+ LFS E E+ + SS + + Y+N
Sbjct: 369 KDGKPWMPV--LRQLQAEGKLNDLQEKLLFSPTRPEEELYELSSDKWELKNLAGDPKYKN 426
Query: 311 K 313
K
Sbjct: 427 K 427
>UniRef50_A7PL28 Cluster: Chromosome chr7 scaffold_20, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_20, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1042
Score = 32.3 bits (70), Expect = 8.9
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 7/118 (5%)
Frame = +1
Query: 148 GSCHQTRPSCSRRKNRQTREHL-LVFFTNQRIRDH*FFLGTSL--NDEVLKIMPVQKQTR 318
G+ ++ S S R T +H+ L ++ R+ FFL SL E L P + R
Sbjct: 711 GASARSPLSSSPRFIEATEQHVRLDVYSPDRLAGELFFLDGSLAFTAEELSRAPAEVLGR 770
Query: 319 AGQRTRFKAFVAIGDNNG----HIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWG 480
+ T +KA + G +GL VK KE A ++ + +V+P+R YWG
Sbjct: 771 SSHGTLYKATLDSGHMLTVKWLRVGL-VKHKKEFAKEVKRIGSIRHPNVVPLRAYYWG 827
>UniRef50_A0NG23 Cluster: ENSANGP00000030675; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000030675 - Anopheles gambiae
str. PEST
Length = 357
Score = 32.3 bits (70), Expect = 8.9
Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = -2
Query: 155 QEPNLSGLPCRANDHGRD--HDRVHEDRHGIYLHRVIRKRRENRHVHRLEQR 6
+EP R ND GRD HD EDRH +RRE+R R E R
Sbjct: 224 EEPREDRRNERRNDDGRDERHDDRREDRHEERREERREERREDRREDRREDR 275
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 589,579,659
Number of Sequences: 1657284
Number of extensions: 12373392
Number of successful extensions: 35277
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 33446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35182
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -