Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0501.Seq
(597 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4413| Best HMM Match : No HMM Matches (HMM E-Value=.) 171 4e-43
SB_56816| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_25016| Best HMM Match : PDZ (HMM E-Value=5.6e-08) 32 0.40
SB_53557| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.53
SB_52533| Best HMM Match : rve (HMM E-Value=2) 31 0.93
SB_20635| Best HMM Match : rve (HMM E-Value=0.91) 30 1.2
SB_53780| Best HMM Match : RVT_1 (HMM E-Value=0.0007) 29 2.2
SB_5251| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_54962| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_25521| Best HMM Match : NLPC_P60 (HMM E-Value=5.7) 29 2.9
SB_993| Best HMM Match : rve (HMM E-Value=2.7e-33) 29 2.9
SB_47521| Best HMM Match : RVT_1 (HMM E-Value=7.2e-24) 29 3.8
SB_32523| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-17) 28 5.0
SB_23120| Best HMM Match : Mucin (HMM E-Value=0.033) 28 5.0
SB_32282| Best HMM Match : Laminin_G_2 (HMM E-Value=0) 28 5.0
SB_54594| Best HMM Match : Ank (HMM E-Value=4.4e-11) 28 6.6
SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29) 28 6.6
SB_8063| Best HMM Match : Homeobox (HMM E-Value=8.5e-24) 28 6.6
SB_30332| Best HMM Match : RVT_1 (HMM E-Value=2.7e-34) 27 8.7
SB_17882| Best HMM Match : ShTK (HMM E-Value=1e-05) 27 8.7
>SB_4413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 171 bits (416), Expect = 4e-43
Identities = 83/105 (79%), Positives = 91/105 (86%), Gaps = 1/105 (0%)
Frame = +1
Query: 196 QTREHLLVF-FTNQRIRDH*FFLGTSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNG 372
+T EH+ +F + FFLG +L DEVLKIMPVQKQTRAGQRTRFKAFVAIGD+NG
Sbjct: 24 KTLEHIYLFSLPIKEFEIIDFFLGAALKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDSNG 83
Query: 373 HIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 507
H+GLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIGKPHTV
Sbjct: 84 HVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTV 128
Score = 64.1 bits (149), Expect = 8e-11
Identities = 30/36 (83%), Positives = 32/36 (88%)
Frame = +2
Query: 146 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
WVPVTKLGRLV++ KI LE IYLFSLPIKEFEIID
Sbjct: 8 WVPVTKLGRLVKDLKIKTLEHIYLFSLPIKEFEIID 43
Score = 54.0 bits (124), Expect = 9e-08
Identities = 23/25 (92%), Positives = 23/25 (92%)
Frame = +3
Query: 507 PCKVTGKCGSVTVRLIPAPRGTGIV 581
PCKVTGKCGS VRLIPAPRGTGIV
Sbjct: 129 PCKVTGKCGSTRVRLIPAPRGTGIV 153
>SB_56816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1200
Score = 31.9 bits (69), Expect = 0.40
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -2
Query: 119 NDHGRDHDRVHEDRHGIYLHRVIRKRRENRH 27
NDH H H RH + HR R+RR RH
Sbjct: 729 NDHHNHHAHYHHRRHHHHHHRRRRRRRRLRH 759
>SB_25016| Best HMM Match : PDZ (HMM E-Value=5.6e-08)
Length = 816
Score = 31.9 bits (69), Expect = 0.40
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -2
Query: 119 NDHGRDHDRVHEDRHGIYLHRVIRKRRENRH 27
NDH H H RH + HR R+RR RH
Sbjct: 756 NDHHNHHAHYHHRRHHHHHHRRRRRRRRLRH 786
>SB_53557| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1049
Score = 31.5 bits (68), Expect = 0.53
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = -1
Query: 447 QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLYRHDLKNLIIQG 268
++ + NS N D TNMT + + G CL + TC+ L DL NL+ +
Sbjct: 235 RILRRNSQPNDQADVARLQSLITNMTEIYSTGKVCL-NITRNNTCMSL-DPDLGNLMSRS 292
Query: 267 RAEEE 253
R ++E
Sbjct: 293 RNQDE 297
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 31.5 bits (68), Expect = 0.53
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = -1
Query: 447 QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLYRHDLKNLIIQG 268
++ + NS N D TNMT + + G CL + TC+ L DL NL+ +
Sbjct: 519 RILRRNSQPNDQADVARLQSLITNMTEIYSTGKVCL-NITRNNTCMSL-DPDLGNLMSRS 576
Query: 267 RAEEE 253
R ++E
Sbjct: 577 RNQDE 581
>SB_52533| Best HMM Match : rve (HMM E-Value=2)
Length = 212
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 232 QRIRDH*FFLGTSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLG 387
QR+R L N +LK++ + Q +A + F+ FVA + H G G
Sbjct: 81 QRLRSKANGLVERTNRSILKVLKIATQEKADMQREFRKFVAAYRSTPHTGTG 132
>SB_20635| Best HMM Match : rve (HMM E-Value=0.91)
Length = 748
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 232 QRIRDH*FFLGTSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLG 387
QR+R L N +LK++ + Q +A + F+ FVA + H G G
Sbjct: 141 QRLRGKANGLVERTNRSILKVLKIATQEKADMQREFRKFVAAYRSTPHTGTG 192
>SB_53780| Best HMM Match : RVT_1 (HMM E-Value=0.0007)
Length = 280
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = -1
Query: 420 NGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLYRHDL 289
N G LA + N+ +V NG K + C LS T L LY HDL
Sbjct: 108 NAYGKSLAEFYNSNNL--IVLNGVK--QGCMLSPTLLNLYVHDL 147
>SB_5251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 945
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 274 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLG 387
N +LK++ + Q +A + F+ FVA + H G G
Sbjct: 811 NRSILKVLKIATQEKADMQREFRKFVAAYRSTPHTGTG 848
>SB_54962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2211
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 274 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLG 387
N +LK++ + Q +A + F+ FVA + H G G
Sbjct: 2008 NRSILKVLKIATQEKADMQREFRKFVAAYRSTPHTGTG 2045
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2
Query: 92 VHEDRHGIYLHRVIRKRRENRHVHRLEQ 9
+H D+ IYLH ++ K+ +N HV +Q
Sbjct: 48 MHPDKSYIYLHDLLGKKLDNPHVKNYQQ 75
>SB_25521| Best HMM Match : NLPC_P60 (HMM E-Value=5.7)
Length = 212
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 274 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLG 387
N +LK++ + Q +A + F+ FVA + H G G
Sbjct: 9 NRSILKVLKIATQEKADMQREFRKFVAAYRSTPHTGTG 46
>SB_993| Best HMM Match : rve (HMM E-Value=2.7e-33)
Length = 735
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 274 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLG 387
N +LK++ + Q +A + F+ FVA + H G G
Sbjct: 532 NRSILKVLKIATQEKADMQREFRKFVAAYRSTPHTGTG 569
>SB_47521| Best HMM Match : RVT_1 (HMM E-Value=7.2e-24)
Length = 338
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 333 CALSGTCLFLYRHDLKNLIIQGRAEEESMISNSL 232
C LS T LY HDL + + + + + E ++ NS+
Sbjct: 111 CVLSTTLFNLYLHDLSDSLRELQPQREGLVINSI 144
>SB_32523| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-17)
Length = 1130
Score = 28.3 bits (60), Expect = 5.0
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3
Query: 324 TAHTFQGICCHWRQQRSYW 380
TA + ICCH +Q + +W
Sbjct: 486 TADQYDAICCHTQQSKKFW 504
>SB_23120| Best HMM Match : Mucin (HMM E-Value=0.033)
Length = 382
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -2
Query: 170 GRVW*QEPNLSGLPCRANDHGRDHDRVHEDRHGIYLH 60
G +W + L LP H DHDR H RH +H
Sbjct: 103 GFLWQKNGVLLSLPPPQFRHSHDHDRHHYHRHHNNIH 139
>SB_32282| Best HMM Match : Laminin_G_2 (HMM E-Value=0)
Length = 897
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 322 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 411
G++ + K F+A+G NGH+ C ++A
Sbjct: 356 GRKDKRKDFLALGLRNGHVEFRFSCGADIA 385
>SB_54594| Best HMM Match : Ank (HMM E-Value=4.4e-11)
Length = 733
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 355 IGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLP-VRRGYWGNKIGKPHT 504
IGD+ G + V+ +K + G++ L+ P +RRG G++ KPH+
Sbjct: 137 IGDSGGIDTMDVR-NKATGSVAWGSVTKRPLTSTPDIRRGQTGSEFRKPHS 186
>SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29)
Length = 1779
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -2
Query: 119 NDHGRDHDRVHEDRHGIYLHRVIRKRRENRHVHRLEQR 6
N H R HDR H RH + H+ K + + +QR
Sbjct: 343 NKHYRHHDRNHHHRHHHHHHKHHHKAANHHKLSTQKQR 380
>SB_8063| Best HMM Match : Homeobox (HMM E-Value=8.5e-24)
Length = 963
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -2
Query: 449 DSLARIIAPRMAVATSLLHFTPKPI*PLLSPMATNALKRVRCPA 318
D+L+ IAP A SLL + P+++P A +AL ++ P+
Sbjct: 365 DALSLQIAPSANNALSLLKGAYDALSPMIAPSANDALSLLKAPS 408
>SB_30332| Best HMM Match : RVT_1 (HMM E-Value=2.7e-34)
Length = 1683
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +1
Query: 301 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGV--KCSKEVATAIRGAIILAKLSVLPVRRGY 474
+Q+ TR +RT +NN ++ LG+ C + TA+ G +L+ + ++ G
Sbjct: 1460 IQENTRTSRRTDISYRQLQANNNKNLELGIWRHCGPAILTALSG----RRLACVKIQAGP 1515
Query: 475 W 477
W
Sbjct: 1516 W 1516
>SB_17882| Best HMM Match : ShTK (HMM E-Value=1e-05)
Length = 387
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +1
Query: 301 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGV--KCSKEVATAIRGAIILAKLSVLPVRRGY 474
+Q+ TR +RT +NN ++ LG+ C + TA+ G +L+ + ++ G
Sbjct: 274 IQENTRTSRRTDISYRQLQANNNKNLELGIWRHCGPAILTALSG----RRLACVKIQAGP 329
Query: 475 W 477
W
Sbjct: 330 W 330
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,973,339
Number of Sequences: 59808
Number of extensions: 424643
Number of successful extensions: 1103
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1103
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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