Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0501.Seq
(597 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 24 0.98
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 24 0.98
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 24 0.98
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 24 0.98
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 23 2.3
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 4.0
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 22 5.3
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 5.3
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 5.3
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 6.9
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 6.9
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 6.9
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 6.9
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 6.9
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 6.9
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 6.9
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 6.9
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 6.9
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 21 6.9
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 6.9
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 24.2 bits (50), Expect = 0.98
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 187 KNRQTREHLLVFFT 228
KN QTREH L+ FT
Sbjct: 129 KNGQTREHALLAFT 142
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 24.2 bits (50), Expect = 0.98
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 187 KNRQTREHLLVFFT 228
KN QTREH L+ FT
Sbjct: 56 KNGQTREHALLAFT 69
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 24.2 bits (50), Expect = 0.98
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 187 KNRQTREHLLVFFT 228
KN QTREH L+ FT
Sbjct: 72 KNGQTREHALLAFT 85
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 24.2 bits (50), Expect = 0.98
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 187 KNRQTREHLLVFFT 228
KN QTREH L+ FT
Sbjct: 129 KNGQTREHALLAFT 142
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 23.0 bits (47), Expect = 2.3
Identities = 16/59 (27%), Positives = 24/59 (40%)
Frame = +1
Query: 160 QTRPSCSRRKNRQTREHLLVFFTNQRIRDH*FFLGTSLNDEVLKIMPVQKQTRAGQRTR 336
+T PS + R+ EH L F N + + +FL N ++K T Q R
Sbjct: 192 ETFPSVYSKTRRRALEHTLDRFHNDKYSNVPYFLFGDFNFRTDTAGVIKKLTEDTQERR 250
Score = 23.0 bits (47), Expect = 2.3
Identities = 8/30 (26%), Positives = 16/30 (53%)
Frame = -3
Query: 220 KQVNALEFVDFSFANKTAEFGDRNPIFLVF 131
+ +++ + V++ T GD P+FL F
Sbjct: 355 QDISSPDAVEYGIIGPTTCMGDHKPVFLEF 384
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 22.2 bits (45), Expect = 4.0
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 368 TVILVWV*SAARKSPL 415
T++LVW SAA SP+
Sbjct: 306 TILLVWAISAAIGSPI 321
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 21.8 bits (44), Expect = 5.3
Identities = 7/21 (33%), Positives = 11/21 (52%)
Frame = +3
Query: 510 CKVTGKCGSVTVRLIPAPRGT 572
C + G CG + + P+GT
Sbjct: 75 CPICGACGDIAHTVKYCPKGT 95
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/20 (50%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +1
Query: 151 SCHQTRP-SCSRRKNRQTRE 207
S H +R SCSR +NR+ +E
Sbjct: 228 SSHYSRERSCSRDRNREYKE 247
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 139 ERLGSCHQTRPSCSRRKNRQTRE 207
+ S + SCSR +NR+ RE
Sbjct: 225 QHTSSRYSRERSCSRDRNREYRE 247
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 172 SCSRRKNRQTRE 207
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 172 SCSRRKNRQTRE 207
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 172 SCSRRKNRQTRE 207
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 172 SCSRRKNRQTRE 207
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 172 SCSRRKNRQTRE 207
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 172 SCSRRKNRQTRE 207
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 172 SCSRRKNRQTRE 207
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 172 SCSRRKNRQTRE 207
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 172 SCSRRKNRQTRE 207
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 172 SCSRRKNRQTRE 207
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 172 SCSRRKNRQTRE 207
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,636
Number of Sequences: 438
Number of extensions: 3845
Number of successful extensions: 24
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -