Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0500.Seq
         (698 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7KPI8 Cluster: Aminopeptidase-1; n=3; Caenorhabditis e...    37   0.41 
UniRef50_Q7QUE9 Cluster: GLP_59_15138_16382; n=2; Giardia intest...    33   8.9  
UniRef50_Q4QJ70 Cluster: ABC transporter, putative; n=8; Leishma...    33   8.9  

>UniRef50_Q7KPI8 Cluster: Aminopeptidase-1; n=3; Caenorhabditis
           elegans|Rep: Aminopeptidase-1 - Caenorhabditis elegans
          Length = 609

 Score = 37.1 bits (82), Expect = 0.41
 Identities = 19/49 (38%), Positives = 26/49 (53%)
 Frame = -1

Query: 191 IKDVNSTNTSDNQLIKLVSRLAEADRDTATSSIPYHTMTGAL*TIPQKI 45
           ++ VN     D++  KLV  L  AD D A SS+PY   +  L TI Q +
Sbjct: 353 VRTVNDVFGPDHEYTKLVQNLGNADPDDAFSSVPYEKGSALLFTIEQAL 401


>UniRef50_Q7QUE9 Cluster: GLP_59_15138_16382; n=2; Giardia
           intestinalis|Rep: GLP_59_15138_16382 - Giardia lamblia
           ATCC 50803
          Length = 414

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
 Frame = +1

Query: 202 IPGGLIFFNLRRKIIFVSD*SGVIVMTSQAKYSSIFVHISNVTC-TLTPFNIL 357
           +PGG +FF+L++K+ F  D S V ++ +Q   +  ++H  N+    L P NIL
Sbjct: 111 VPGGELFFHLKKKVTF--DESYVKLVAAQLVLAIEYLHDMNIVIRDLKPENIL 161


>UniRef50_Q4QJ70 Cluster: ABC transporter, putative; n=8;
           Leishmania|Rep: ABC transporter, putative - Leishmania
           major
          Length = 663

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +1

Query: 166 VFVLLTSLIFLNIPGGLIFFNLRRKIIFVSD*SGVIVMTSQAK-YSSIFVHIS 321
           +F  +   IF  I  GLIF N+R  +  + D  GV+ MT   +  SS F+ I+
Sbjct: 399 LFSYMAQAIFFAIVVGLIFLNVRANVEGIQDRQGVLFMTVMNRAMSSTFIMIN 451


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,144,396
Number of Sequences: 1657284
Number of extensions: 13523784
Number of successful extensions: 28613
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28607
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)