Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0498.Seq
         (699 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         23   3.7  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   6.4  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   6.4  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   8.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   8.5  

>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 587 SCHSGACVCR 558
           SC +G C+CR
Sbjct: 94  SCRNGVCICR 103


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -2

Query: 590 SSCHSGACVCRGCSGY 543
           S  H  A  C GC G+
Sbjct: 195 SGYHYNALTCEGCKGF 210


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 386 VRSGNKVSVCLSRIKFHCNSGLDV 315
           + SGNK+S+  S+     NS  +V
Sbjct: 550 INSGNKISLATSKSFIKANSQTEV 573


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 228 FPRIQSPEVIVVVALRFSQTFRYRARYR 145
           +PR+++P  I     R   T  YR++ R
Sbjct: 111 YPRMRAPSFICENETRQGLTLHYRSKRR 138


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 10/50 (20%), Positives = 22/50 (44%)
 Frame = +3

Query: 210  DSESSGSAGCQRRPEQIFSKRNIDPEQIKEINNYYDIETTVTVEFDTGQA 359
            D +        ++P+Q   ++    +Q +++N+Y D+     V  D   A
Sbjct: 1437 DRDRKTLTSAPQQPQQQQQQQQQQQQQQQQLNHYPDLHNLYAVPTDKKSA 1486


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,868
Number of Sequences: 438
Number of extensions: 3369
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)