Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0497.Seq
(797 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g05670.2 68418.m00624 expressed protein 56 3e-08
At5g05670.1 68418.m00623 expressed protein 56 3e-08
At2g18770.1 68415.m02185 expressed protein 55 5e-08
At3g22950.1 68416.m02893 ADP-ribosylation factor, putative simil... 37 0.018
At2g15310.1 68415.m01746 ADP-ribosylation factor, putative simil... 37 0.018
At5g17060.1 68418.m01999 ADP-ribosylation factor, putative simil... 36 0.031
At3g03120.1 68416.m00308 ADP-ribosylation factor, putative simil... 36 0.031
At5g14670.1 68418.m01719 ADP-ribosylation factor, putative simil... 35 0.072
At3g62290.1 68416.m06998 ADP-ribosylation factor identical to GP... 35 0.072
At2g47170.1 68415.m05890 ADP-ribosylation factor 1 (ARF1) identi... 35 0.072
At1g70490.3 68414.m08112 ADP-ribosylation factor, putative nearl... 35 0.072
At1g70490.2 68414.m08111 ADP-ribosylation factor, putative nearl... 35 0.072
At1g70490.1 68414.m08110 ADP-ribosylation factor, putative nearl... 35 0.072
At1g23490.1 68414.m02948 ADP-ribosylation factor identical to SP... 35 0.072
At1g10630.1 68414.m01205 ADP-ribosylation factor, putative simil... 35 0.072
At5g47110.1 68418.m05808 lil3 protein, putative similar to Lil3 ... 31 0.89
At2g45700.1 68415.m05682 sterile alpha motif (SAM) domain-contai... 30 1.5
At1g57680.2 68414.m06546 expressed protein 30 2.0
At1g57680.1 68414.m06545 expressed protein 30 2.0
At5g57580.1 68418.m07194 calmodulin-binding protein similar to c... 29 2.7
At2g29090.1 68415.m03536 cytochrome P450 family protein similar ... 29 2.7
At1g30825.1 68414.m03769 actin-related protein 2/3 complex 34kDa... 29 2.7
At2g17580.1 68415.m02034 polynucleotide adenylyltransferase fami... 29 4.7
At3g44060.1 68416.m04720 F-box family protein contains F-box dom... 28 6.2
At1g31150.1 68414.m03811 expressed protein EST gb|Z33866 comes f... 28 6.2
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 28 8.3
>At5g05670.2 68418.m00624 expressed protein
Length = 260
Score = 56.0 bits (129), Expect = 3e-08
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Frame = +3
Query: 216 SQLSIVNGPIRLWKTLLFVRLAY-SQYRQTFTSMKENIEEYITSNKTLK--------IVD 368
S +++G KT+LF +L S ++ T TSM+ N ++ ++ K +VD
Sbjct: 56 SNTVLLSGLTGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSENTKKGKIKPVHLVD 115
Query: 369 LPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILWIRSFRETQLPF*Y 548
+PG RLR K E+ A IVFV+D++ R +EYLY IL + + ++P
Sbjct: 116 VPGHSRLRPKL-EEFLPQAAAIVFVVDALEFLPNCRAASEYLYEILTNANVVKKKIPVLL 174
Query: 549 CATKQGPAISKRKPSYQRDYSKK 617
C K + K ++ K+
Sbjct: 175 CCNKTDKLTAHTKEFIRKQMEKE 197
>At5g05670.1 68418.m00623 expressed protein
Length = 260
Score = 56.0 bits (129), Expect = 3e-08
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Frame = +3
Query: 216 SQLSIVNGPIRLWKTLLFVRLAY-SQYRQTFTSMKENIEEYITSNKTLK--------IVD 368
S +++G KT+LF +L S ++ T TSM+ N ++ ++ K +VD
Sbjct: 56 SNTVLLSGLTGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSENTKKGKIKPVHLVD 115
Query: 369 LPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILWIRSFRETQLPF*Y 548
+PG RLR K E+ A IVFV+D++ R +EYLY IL + + ++P
Sbjct: 116 VPGHSRLRPKL-EEFLPQAAAIVFVVDALEFLPNCRAASEYLYEILTNANVVKKKIPVLL 174
Query: 549 CATKQGPAISKRKPSYQRDYSKK 617
C K + K ++ K+
Sbjct: 175 CCNKTDKLTAHTKEFIRKQMEKE 197
>At2g18770.1 68415.m02185 expressed protein
Length = 260
Score = 55.2 bits (127), Expect = 5e-08
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 10/131 (7%)
Frame = +3
Query: 255 KTLLFVRLAY-SQYRQTFTSMKENIEEYITSN---------KTLKIVDLPGQERLRNKFF 404
KT+LF +L S ++ TSM+ N ++ N K + ++D+PG RL +K
Sbjct: 68 KTVLFYQLRDGSSHQGAVTSMEPNEGTFVLHNENNTKKGKVKPVHLIDVPGHSRLISKL- 126
Query: 405 EQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILWIRSFRETQLPF*YCATKQGPAISKR 584
E++ A +VFV+D++ IR +EYLY IL S + + P C K +
Sbjct: 127 EEYLPRAAAVVFVVDALEFLPNIRAASEYLYDILTNASVIKNKTPVLLCCNKTDKVTAHT 186
Query: 585 KPSYQRDYSKK 617
K ++ K+
Sbjct: 187 KEFIRKQMEKE 197
>At3g22950.1 68416.m02893 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor GB:P91924 [Dugesia japonica]
Length = 183
Score = 36.7 bits (81), Expect = 0.018
Identities = 21/75 (28%), Positives = 37/75 (49%)
Frame = +3
Query: 228 IVNGPIRLWKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFE 407
+V G KT +L + T ++ N+EE + N ++ DL GQ+RLR +
Sbjct: 21 VVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGGQDRLRTSWAT 80
Query: 408 QHKSSAKGIVFVIDS 452
++ + ++ VIDS
Sbjct: 81 YYRGT-HAVIVVIDS 94
>At2g15310.1 68415.m01746 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor (GI:861205) [Chlamydomonas
reinhardtii]
Length = 205
Score = 36.7 bits (81), Expect = 0.018
Identities = 21/84 (25%), Positives = 44/84 (52%)
Frame = +3
Query: 255 KTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFEQHKSSAKGI 434
KT + +L + T ++ N+E + D+ GQE++R K + + +A+G+
Sbjct: 30 KTTILYKLKLGEVVTTVPTIGFNLETVEYKGINFTVWDIGGQEKIR-KLWRHYFQNAQGL 88
Query: 435 VFVIDSINIQKEIRDVAEYLYTIL 506
+FV+DS + ++ + + L+ IL
Sbjct: 89 IFVVDSSDSER-LSEARNELHRIL 111
>At5g17060.1 68418.m01999 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor 1; ARF 1 (GP:385340)
{Drosophila melanogaster)
Length = 192
Score = 35.9 bits (79), Expect = 0.031
Identities = 17/71 (23%), Positives = 39/71 (54%)
Frame = +3
Query: 255 KTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFEQHKSSAKGI 434
KT + +L + T ++ N+E+ N + D+ GQE+LR + + ++ G+
Sbjct: 30 KTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVMFTVWDVGGQEKLR-PLWRHYFNNTDGL 88
Query: 435 VFVIDSINIQK 467
++V+DS++ ++
Sbjct: 89 IYVVDSLDRER 99
>At3g03120.1 68416.m00308 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor 1; ARF 1 (GP:385340)
{Drosophila melanogaster}
Length = 192
Score = 35.9 bits (79), Expect = 0.031
Identities = 17/71 (23%), Positives = 39/71 (54%)
Frame = +3
Query: 255 KTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFEQHKSSAKGI 434
KT + +L + T ++ N+E+ N + D+ GQE+LR + + ++ G+
Sbjct: 30 KTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLR-PLWRHYFNNTDGL 88
Query: 435 VFVIDSINIQK 467
++V+DS++ ++
Sbjct: 89 IYVVDSLDRER 99
>At5g14670.1 68418.m01719 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor DcARF1 (GI:965483) [Daucus
carota].
Length = 188
Score = 34.7 bits (76), Expect = 0.072
Identities = 19/84 (22%), Positives = 44/84 (52%)
Frame = +3
Query: 255 KTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFEQHKSSAKGI 434
KT + +L + T ++ N+E N + + D+ GQ+++R + + + +G+
Sbjct: 30 KTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR-PLWRHYFQNTQGL 88
Query: 435 VFVIDSINIQKEIRDVAEYLYTIL 506
+FV+DS N + + + + L+ +L
Sbjct: 89 IFVVDS-NDRDRVVEARDELHRML 111
>At3g62290.1 68416.m06998 ADP-ribosylation factor identical to
GP:166586 ADP-ribosylation factor {Arabidopsis
thaliana}; ADP-ribosylation factor 1 - Arabidopsis
thaliana, PIR:S28875
Length = 181
Score = 34.7 bits (76), Expect = 0.072
Identities = 19/84 (22%), Positives = 44/84 (52%)
Frame = +3
Query: 255 KTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFEQHKSSAKGI 434
KT + +L + T ++ N+E N + + D+ GQ+++R + + + +G+
Sbjct: 30 KTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR-PLWRHYFQNTQGL 88
Query: 435 VFVIDSINIQKEIRDVAEYLYTIL 506
+FV+DS N + + + + L+ +L
Sbjct: 89 IFVVDS-NDRDRVVEARDELHRML 111
>At2g47170.1 68415.m05890 ADP-ribosylation factor 1 (ARF1) identical
to ADP-ribosylation factor ARF1({Arabidopsis thaliana}
(SP:P36397) (GP:166586)
Length = 181
Score = 34.7 bits (76), Expect = 0.072
Identities = 19/84 (22%), Positives = 44/84 (52%)
Frame = +3
Query: 255 KTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFEQHKSSAKGI 434
KT + +L + T ++ N+E N + + D+ GQ+++R + + + +G+
Sbjct: 30 KTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR-PLWRHYFQNTQGL 88
Query: 435 VFVIDSINIQKEIRDVAEYLYTIL 506
+FV+DS N + + + + L+ +L
Sbjct: 89 IFVVDS-NDRDRVVEARDELHRML 111
>At1g70490.3 68414.m08112 ADP-ribosylation factor, putative nearly
identical to ADP-ribosylation factor 1 GB:P36397
[Arabidopsis thaliana], ADP-ribosylation factor
GI:166586 [Arabidopsis thaliana]
Length = 181
Score = 34.7 bits (76), Expect = 0.072
Identities = 19/84 (22%), Positives = 44/84 (52%)
Frame = +3
Query: 255 KTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFEQHKSSAKGI 434
KT + +L + T ++ N+E N + + D+ GQ+++R + + + +G+
Sbjct: 30 KTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR-PLWRHYFQNTQGL 88
Query: 435 VFVIDSINIQKEIRDVAEYLYTIL 506
+FV+DS N + + + + L+ +L
Sbjct: 89 IFVVDS-NDRDRVVEARDELHRML 111
>At1g70490.2 68414.m08111 ADP-ribosylation factor, putative nearly
identical to ADP-ribosylation factor 1 GB:P36397
[Arabidopsis thaliana], ADP-ribosylation factor
GI:166586 [Arabidopsis thaliana]
Length = 181
Score = 34.7 bits (76), Expect = 0.072
Identities = 19/84 (22%), Positives = 44/84 (52%)
Frame = +3
Query: 255 KTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFEQHKSSAKGI 434
KT + +L + T ++ N+E N + + D+ GQ+++R + + + +G+
Sbjct: 30 KTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR-PLWRHYFQNTQGL 88
Query: 435 VFVIDSINIQKEIRDVAEYLYTIL 506
+FV+DS N + + + + L+ +L
Sbjct: 89 IFVVDS-NDRDRVVEARDELHRML 111
>At1g70490.1 68414.m08110 ADP-ribosylation factor, putative nearly
identical to ADP-ribosylation factor 1 GB:P36397
[Arabidopsis thaliana], ADP-ribosylation factor
GI:166586 [Arabidopsis thaliana]
Length = 181
Score = 34.7 bits (76), Expect = 0.072
Identities = 19/84 (22%), Positives = 44/84 (52%)
Frame = +3
Query: 255 KTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFEQHKSSAKGI 434
KT + +L + T ++ N+E N + + D+ GQ+++R + + + +G+
Sbjct: 30 KTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR-PLWRHYFQNTQGL 88
Query: 435 VFVIDSINIQKEIRDVAEYLYTIL 506
+FV+DS N + + + + L+ +L
Sbjct: 89 IFVVDS-NDRDRVVEARDELHRML 111
>At1g23490.1 68414.m02948 ADP-ribosylation factor identical to
SP:Q9SRC3 ADP-ribosylation factor 1-like [Arabidopsis
thaliana], ADP-ribosylation factor GI:166586
[Arabidopsis thaliana]
Length = 181
Score = 34.7 bits (76), Expect = 0.072
Identities = 19/84 (22%), Positives = 44/84 (52%)
Frame = +3
Query: 255 KTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFEQHKSSAKGI 434
KT + +L + T ++ N+E N + + D+ GQ+++R + + + +G+
Sbjct: 30 KTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR-PLWRHYFQNTQGL 88
Query: 435 VFVIDSINIQKEIRDVAEYLYTIL 506
+FV+DS N + + + + L+ +L
Sbjct: 89 IFVVDS-NDRDRVVEARDELHRML 111
>At1g10630.1 68414.m01205 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor GI:166586 from [Arabidopsis
thaliana]
Length = 181
Score = 34.7 bits (76), Expect = 0.072
Identities = 19/84 (22%), Positives = 44/84 (52%)
Frame = +3
Query: 255 KTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFEQHKSSAKGI 434
KT + +L + T ++ N+E N + + D+ GQ+++R + + + +G+
Sbjct: 30 KTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR-PLWRHYFQNTQGL 88
Query: 435 VFVIDSINIQKEIRDVAEYLYTIL 506
+FV+DS N + + + + L+ +L
Sbjct: 89 IFVVDS-NDRDRVVEARDELHRML 111
>At5g47110.1 68418.m05808 lil3 protein, putative similar to Lil3
protein [Arabidopsis thaliana] gi|4741966|gb|AAD28780
Length = 258
Score = 31.1 bits (67), Expect = 0.89
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +1
Query: 46 DLVSVKRKNST-MESEVVKEKIHTEPILNDPRYITLLSLIVLAVTLIFWWIFSRRYTLRN 222
DL ++ T +S +V E + + ++P + L+V ++I WW + +RY L
Sbjct: 110 DLKQFEKDGKTDWDSVIVSEAKRRKWLEDNPETTSNDELVVFDTSIIPWWAWMKRYHLPE 169
Query: 223 SVLLMG 240
+ LL G
Sbjct: 170 AELLNG 175
>At2g45700.1 68415.m05682 sterile alpha motif (SAM)
domain-containing protein similar to SNM1 protein [Mus
musculus] GI:7595835; contains Pfam profile PF00536: SAM
domain (Sterile alpha motif)
Length = 723
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 159 YCSSSNPHILVDFLSKVYSSQLSIVNGPI 245
+CSSS PH ++D + L NGPI
Sbjct: 65 FCSSSTPHCILDCIPSSVDCSLGDFNGPI 93
>At1g57680.2 68414.m06546 expressed protein
Length = 362
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = -2
Query: 457 LIESITNTIPLALLLCCSKNLFLSLSCPGRSTIFNVLLEVIYSSIFSFIEVKVCL 293
LI S+++ +PL +++ C LS+ IF L + + S+F F V +CL
Sbjct: 240 LIFSVSSFLPLRIVMLC-----LSVLTAADKIIFEALSFLAFLSLFCFCVVSICL 289
>At1g57680.1 68414.m06545 expressed protein
Length = 362
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = -2
Query: 457 LIESITNTIPLALLLCCSKNLFLSLSCPGRSTIFNVLLEVIYSSIFSFIEVKVCL 293
LI S+++ +PL +++ C LS+ IF L + + S+F F V +CL
Sbjct: 240 LIFSVSSFLPLRIVMLC-----LSVLTAADKIIFEALSFLAFLSLFCFCVVSICL 289
>At5g57580.1 68418.m07194 calmodulin-binding protein similar to
calmodulin-binding protein TCB60 GI:1698548 from
[Nicotiana tabacum]
Length = 647
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = +1
Query: 82 ESEVVKEKIHTEPILNDPRYITLLSLIVLAVTLIFW----WIFSRRYTLRNSVLLMGLSD 249
ES VVKE+ P+L Y+TL + L+F WI SR++ L V + G D
Sbjct: 166 ESHVVKERSGKRPLLTGEVYVTLKEGVGTLGELVFTDNSSWIRSRKFRLGLRV-VSGCCD 224
Query: 250 SGRL 261
R+
Sbjct: 225 GMRI 228
>At2g29090.1 68415.m03536 cytochrome P450 family protein similar to
Cytochrome P450 88A3 (SP:O23051) [Arabidopsis thaliana];
similar to taxane 13-alpha-hydroxylase (GI:17148242)
[Taxus cuspidata].
Length = 482
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 127 NDPRYITLLSLIVLAVTLIFWWIFSRRYTLRNSVLLMGL 243
++P ITL ++V+ V L WW+ + LR MGL
Sbjct: 18 DEPALITLTIVVVVVVLLFKWWLHWKEQRLRLPPGSMGL 56
>At1g30825.1 68414.m03769 actin-related protein 2/3 complex 34kDa
subunit family / arp2/3 complex 34kDa subunit family
contains Pfam PF04045: Arp2/3 complex, 34kD subunit
p34-Arc; similar to ARP2/3 complex 34 kDa subunit
(P34-ARC) (Swiss-Prot:O96623) [Dictyostelium
discoideum]; similar to ARP2/3 complex 34 kDa subunit
(P34-ARC) (Actin-related protein 2/3 complex subunit 2)
(Swiss-Prot:O15144) [Homo sapiens]
Length = 318
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 4/90 (4%)
Frame = -1
Query: 434 NSLSTTLVLFKEFISQSLLSRQI---NYFQCFIRSYILFNI-FFHRSKSLSVLRVSESYK 267
N+ T V+F + L R + + F ++ ++ F+ F H V + ++
Sbjct: 229 NAGFVTFVIFPRHVEGKKLDRTVWNLSTFHAYVSYHVKFSEGFMHTRMRRRVESMIQALD 288
Query: 266 QQSLPESDRPINNTELRRVYLREKIHQNMR 177
Q E R +NN +R+ L E H N +
Sbjct: 289 QAKPLEKTRSMNNKSFKRLGLNEVNHTNSK 318
>At2g17580.1 68415.m02034 polynucleotide adenylyltransferase family
protein similar to SP|P13685 Poly(A) polymerase (EC
2.7.7.19) {Escherichia coli O157:H7}; contains Pfam
profile PF01743: polyA polymerase family protein
Length = 757
Score = 28.7 bits (61), Expect = 4.7
Identities = 23/80 (28%), Positives = 36/80 (45%)
Frame = +1
Query: 448 ILSIYRKKSEM*QNTYTQSCGSDHSGKHNSPSNIVQQNRDQPLAKGSQVIKGITRKRNKF 627
IL R+ SE + T+ C SG + V Q + +K + V + +K +K
Sbjct: 586 ILKRTREDSEQNNDQETEVCPRTPSGPAKNQDQSVVQMLKRRRSKEAPVSEPPKQKTSKR 645
Query: 628 SSCDQIESNCSPSIPSGRQH 687
S D E+ S S+P+ QH
Sbjct: 646 SRSDDQEAVGSLSVPAKIQH 665
>At3g44060.1 68416.m04720 F-box family protein contains F-box domain
Pfam:PF00646
Length = 427
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = -2
Query: 457 LIESITNTIPLALLLCCSKNLFLSLSCPGRSTIFNVLLEVIYSS 326
LI I N L L CS +S+ C G +FN L+E+++SS
Sbjct: 271 LIREICNV--KTLHLTCSTVEVISVYCKGGLPMFNNLVELVFSS 312
>At1g31150.1 68414.m03811 expressed protein EST gb|Z33866 comes from
this gene
Length = 673
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 88 EVVKEKIHTEPILNDPRYITLLSLIVLAVTLIFWWIFSRRYTLRNSV 228
E +K K+H NDP Y+TL L + WI + LRN +
Sbjct: 404 EKIKAKVHVGGESNDPGYVTLAYLNDMKE-----WILKQNQDLRNKI 445
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 467 RNQRCSRIPIHNL-VDPIIQGNTTPLLILCNKTGTSH*Q 580
RNQRC I NL VD + + PLL LCN+ TS Q
Sbjct: 42 RNQRC----IMNLYVDRVKYDDYLPLLELCNEINTSEVQ 76
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,486,536
Number of Sequences: 28952
Number of extensions: 347247
Number of successful extensions: 1026
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1022
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1804564000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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