Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0495.Seq
         (695 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q226H1 Cluster: Putative uncharacterized protein; n=1; ...    35   2.2  
UniRef50_A2E463 Cluster: TBC domain containing protein; n=1; Tri...    34   2.9  
UniRef50_A7NZ00 Cluster: Chromosome chr6 scaffold_3, whole genom...    33   8.8  

>UniRef50_Q226H1 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 411

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 16/26 (61%), Positives = 19/26 (73%)
 Frame = -2

Query: 79  NYIADSFNTFTPLYNFYLYISYKTIS 2
           NY+ D+ NT TP+ NFY  ISYK IS
Sbjct: 306 NYMKDNINTVTPINNFYT-ISYKQIS 330


>UniRef50_A2E463 Cluster: TBC domain containing protein; n=1;
           Trichomonas vaginalis G3|Rep: TBC domain containing
           protein - Trichomonas vaginalis G3
          Length = 279

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -2

Query: 673 HLRSQSFPMTQIF-HWLTGYHLSHFPVHSLLAAFQQQLELYA 551
           H  S++  M++IF HW   YH +  P+ SLL  +   L L A
Sbjct: 171 HFSSEALDMSEIFIHWFQFYHSTALPIQSLLRLWDTYLSLDA 212


>UniRef50_A7NZ00 Cluster: Chromosome chr6 scaffold_3, whole genome
           shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
           chr6 scaffold_3, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 617

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
 Frame = -2

Query: 670 LRSQSFPMTQIFHWLTGYHLSHFPVHSLL------AAFQQQLELYAHFYF 539
           + S SF  + +FH LT  HL  FP H L+      A  + QL   A FYF
Sbjct: 123 ISSSSFTPSSLFHELTQPHLDSFPTHVLIHEAIINAHVRSQLPEQALFYF 172


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 564,431,849
Number of Sequences: 1657284
Number of extensions: 9580115
Number of successful extensions: 21252
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21238
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)