Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0495.Seq
         (695 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p...    29   4.2  
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr...    29   4.2  
AF125960-4|AAD14738.1|  292|Caenorhabditis elegans Hypothetical ...    27   9.7  
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc...    27   9.7  

>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical protein
            C34E11.3 protein.
          Length = 1577

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +1

Query: 400  DEVDEVRAGARGRYGVNEVREGEIGRNGELVEFEK 504
            + +DE R   RG +G+ + R  E  +NG+  +FE+
Sbjct: 1444 EAIDEPRTDKRGFFGIRKSRSVETTQNGKHSKFEE 1478


>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
            protein C34E11.3 protein.
          Length = 1577

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +1

Query: 400  DEVDEVRAGARGRYGVNEVREGEIGRNGELVEFEK 504
            + +DE R   RG +G+ + R  E  +NG+  +FE+
Sbjct: 1444 EAIDEPRTDKRGFFGIRKSRSVETTQNGKHSKFEE 1478


>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical protein
            C34E11.3 protein.
          Length = 1577

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +1

Query: 400  DEVDEVRAGARGRYGVNEVREGEIGRNGELVEFEK 504
            + +DE R   RG +G+ + R  E  +NG+  +FE+
Sbjct: 1444 EAIDEPRTDKRGFFGIRKSRSVETTQNGKHSKFEE 1478


>AF125960-4|AAD14738.1|  292|Caenorhabditis elegans Hypothetical
           protein T12B3.4 protein.
          Length = 292

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = -2

Query: 649 MTQIFHWLTGYHLSHFPVHSLLAAFQQQLELYAHFYFITLHY 524
           +T++F      ++ HF     L A      LY HFYF    Y
Sbjct: 215 LTRLFRVFVHVYIHHFDRIRELGAEPHANTLYKHFYFFVTEY 256


>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase
           associated protein homologprotein 1, isoform a protein.
          Length = 1256

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -2

Query: 556 YAHFYFITLHYYYSSNPPSRT 494
           Y+  +F  L +Y+SS+PP+ T
Sbjct: 41  YSLHFFFALQFYFSSSPPTST 61


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,986,844
Number of Sequences: 27780
Number of extensions: 226025
Number of successful extensions: 588
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)