Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0494.Seq
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   1.2  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   2.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   2.7  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   8.1  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   8.1  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +3

Query: 240 VCDRLRSVPRQTISVCACAQDQAPE 314
           +CD  +S  +QT+ +C    ++ PE
Sbjct: 294 ICDSAKSESQQTVFLCYKLMEKFPE 318


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = -2

Query: 312 PGPDPGHTRRPK*SASAPISICRIPSQGTLDQSHLGP 202
           P P PGH+  P    +  I+    PS      S+L P
Sbjct: 324 PSPVPGHSTSPNLPLTHNIAHNPYPSHSIYPSSNLMP 360


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +2

Query: 323  NLRNPLDPHRIPGRRLDLRVKFWVPPQLLINE 418
            NLRN    H+      +L+ +FWV     I E
Sbjct: 1259 NLRNQNLSHQAKNLDSNLKYEFWVTAATTIGE 1290



 Score = 21.4 bits (43), Expect = 4.7
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +2

Query: 422 TRHQFDLQAKLDLTEGRLLV 481
           T+H+   + +L  T+GRL++
Sbjct: 203 TKHRLTGETRLSATKGRLVI 222


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 243 CDRLRSVPRQTISVCACAQDQ 305
           CD      +QTIS C   Q+Q
Sbjct: 298 CDACTIASKQTISWCYKLQEQ 318


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 243 CDRLRSVPRQTISVCACAQDQ 305
           CD      +QTIS C   Q+Q
Sbjct: 298 CDACTIASKQTISWCYKLQEQ 318


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,065
Number of Sequences: 336
Number of extensions: 2494
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)