Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0494.Seq
(499 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80955-5|AAG01559.2| 573|Caenorhabditis elegans Ferm domain (pr... 39 0.002
U80955-4|ABB51180.1| 589|Caenorhabditis elegans Ferm domain (pr... 39 0.002
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr... 34 0.050
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 29 2.5
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 29 2.5
Z82096-3|CAD45613.1| 548|Caenorhabditis elegans Hypothetical pr... 27 5.7
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 27 5.7
Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical pr... 27 7.6
>U80955-5|AAG01559.2| 573|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 2,
isoform a protein.
Length = 573
Score = 39.1 bits (87), Expect = 0.002
Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = +2
Query: 266 EADYFGLRVCPGSGPGRWLNLRNPLDPHRI--PGRRLDLRVKFWV--PPQLLINEPTRHQ 433
E DYFGL+ WL+ + P L RVKF+ P L E TR+Q
Sbjct: 72 ERDYFGLQYTDPFNVQHWLDPTKKVAKQVAIGPPFTLRFRVKFFTSEPSSNLKEELTRYQ 131
Query: 434 FDLQAKLDLTEGRL 475
F LQ K D++ GRL
Sbjct: 132 FFLQIKQDISSGRL 145
>U80955-4|ABB51180.1| 589|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 2,
isoform b protein.
Length = 589
Score = 39.1 bits (87), Expect = 0.002
Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = +2
Query: 266 EADYFGLRVCPGSGPGRWLNLRNPLDPHRI--PGRRLDLRVKFWV--PPQLLINEPTRHQ 433
E DYFGL+ WL+ + P L RVKF+ P L E TR+Q
Sbjct: 88 ERDYFGLQYTDPFNVQHWLDPTKKVAKQVAIGPPFTLRFRVKFFTSEPSSNLKEELTRYQ 147
Query: 434 FDLQAKLDLTEGRL 475
F LQ K D++ GRL
Sbjct: 148 FFLQIKQDISSGRL 161
>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical
protein H05G16.1 protein.
Length = 1111
Score = 34.3 bits (75), Expect = 0.050
Identities = 28/75 (37%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Frame = +2
Query: 266 EADYFGLRVCPGSGPGRWLNLRNPLDPHRIPGRRLDLR----VKFWVP-PQLLINEPTRH 430
E DYFGL +G WL+ R +I D + VKF+ P P L E TR+
Sbjct: 82 ECDYFGLSFIDINGNHCWLD-REKTILRQITNGSTDAKFYFVVKFYTPNPIDLEEEYTRY 140
Query: 431 QFDLQAKLDLTEGRL 475
F +Q K DL G L
Sbjct: 141 LFTMQIKRDLALGEL 155
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -2
Query: 339 RGFRKLSHLPGPDPGHTRRPK*SASAPISICRIPSQGTLDQSHL 208
RG +++ PGP G + P AP+ I +P L+++HL
Sbjct: 361 RGAPQMAQQPGPH-GAAQHPSSGTVAPMHITSLPGNHPLNRTHL 403
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -2
Query: 339 RGFRKLSHLPGPDPGHTRRPK*SASAPISICRIPSQGTLDQSHL 208
RG +++ PGP G + P AP+ I +P L+++HL
Sbjct: 361 RGAPQMAQQPGPH-GAAQHPSSGTVAPMHITSLPGNHPLNRTHL 403
>Z82096-3|CAD45613.1| 548|Caenorhabditis elegans Hypothetical
protein ZK909.2c protein.
Length = 548
Score = 27.5 bits (58), Expect = 5.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -2
Query: 348 CGSRGFRKLSHLPGPDPGHTRRPK*SASAPIS 253
CGS+ ++ G D + R+P S SAP+S
Sbjct: 192 CGSKDDTDAENMEGLDDDYLRQPTTSTSAPVS 223
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 330 RKLSHLPGPDPGHTRRPK*SASAPISICRIPSQG 229
R + P P P TRRPK + +AP + +QG
Sbjct: 361 RPTTTTPRPTPRRTRRPKTTTAAPTTTTEEVTQG 394
>Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical protein
T24B8.7b protein.
Length = 2923
Score = 27.1 bits (57), Expect = 7.6
Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Frame = -3
Query: 227 LLTNRIWVHLDFQDHRIRLTD*PHFGQHFERKYVKFNKSGRKIFSLMNLTHVTI-VYLTR 51
LL N +WV + D + P + E Y K+ K +F++ + H + L R
Sbjct: 2724 LLKNLMWVGIAEDDDTVEPGVLPVMLEWKETDYTKYRKMNEALFNIRIIKHPELRAVLLR 2783
Query: 50 AKYLFKKVLLNSLCE 6
F+ + S E
Sbjct: 2784 CSKRFRSIFKMSYAE 2798
>Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical protein
T24B8.7a protein.
Length = 2920
Score = 27.1 bits (57), Expect = 7.6
Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Frame = -3
Query: 227 LLTNRIWVHLDFQDHRIRLTD*PHFGQHFERKYVKFNKSGRKIFSLMNLTHVTI-VYLTR 51
LL N +WV + D + P + E Y K+ K +F++ + H + L R
Sbjct: 2721 LLKNLMWVGIAEDDDTVEPGVLPVMLEWKETDYTKYRKMNEALFNIRIIKHPELRAVLLR 2780
Query: 50 AKYLFKKVLLNSLCE 6
F+ + S E
Sbjct: 2781 CSKRFRSIFKMSYAE 2795
>Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical protein
T24B8.7b protein.
Length = 2923
Score = 27.1 bits (57), Expect = 7.6
Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Frame = -3
Query: 227 LLTNRIWVHLDFQDHRIRLTD*PHFGQHFERKYVKFNKSGRKIFSLMNLTHVTI-VYLTR 51
LL N +WV + D + P + E Y K+ K +F++ + H + L R
Sbjct: 2724 LLKNLMWVGIAEDDDTVEPGVLPVMLEWKETDYTKYRKMNEALFNIRIIKHPELRAVLLR 2783
Query: 50 AKYLFKKVLLNSLCE 6
F+ + S E
Sbjct: 2784 CSKRFRSIFKMSYAE 2798
>Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical protein
T24B8.7a protein.
Length = 2920
Score = 27.1 bits (57), Expect = 7.6
Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Frame = -3
Query: 227 LLTNRIWVHLDFQDHRIRLTD*PHFGQHFERKYVKFNKSGRKIFSLMNLTHVTI-VYLTR 51
LL N +WV + D + P + E Y K+ K +F++ + H + L R
Sbjct: 2721 LLKNLMWVGIAEDDDTVEPGVLPVMLEWKETDYTKYRKMNEALFNIRIIKHPELRAVLLR 2780
Query: 50 AKYLFKKVLLNSLCE 6
F+ + S E
Sbjct: 2781 CSKRFRSIFKMSYAE 2795
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,386,540
Number of Sequences: 27780
Number of extensions: 252648
Number of successful extensions: 726
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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