Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0489.Seq
(692 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC032473-1|AAH32473.1| 778|Homo sapiens melanoma antigen family... 32 1.7
BC014070-1|AAH14070.1| 834|Homo sapiens melanoma antigen family... 32 1.7
AL929410-2|CAH71561.1| 834|Homo sapiens melanoma antigen family... 32 1.7
AL929410-1|CAH71560.1| 778|Homo sapiens melanoma antigen family... 32 1.7
AL133628-1|CAB63752.1| 476|Homo sapiens hypothetical protein pr... 32 1.7
AK074092-1|BAB84918.1| 521|Homo sapiens FLJ00163 protein protein. 32 1.7
AF300328-1|AAQ14483.1| 778|Homo sapiens MAGE tumor antigen CCF ... 32 1.7
AF258554-1|AAG23757.1| 778|Homo sapiens PP2250 protein. 32 1.7
AF217963-1|AAG09704.1| 778|Homo sapiens NRAGE protein. 32 1.7
AF124440-1|AAD31421.1| 574|Homo sapiens MAGE tumor antigen D1 p... 32 1.7
BC024009-1|AAH24009.3| 725|Homo sapiens leucine rich repeat con... 32 2.2
AK058059-1|BAB71645.1| 524|Homo sapiens protein ( Homo sapiens ... 32 2.2
DQ523940-1|ABI35452.1| 122|Homo sapiens immunoglobulin heavy ch... 31 3.0
J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein. 31 3.9
L11690-1|AAA52288.1| 2649|Homo sapiens bullous pemphigoid antige... 31 5.2
BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein. 31 5.2
BC065536-1|AAH65536.1| 1143|Homo sapiens DST protein protein. 31 5.2
AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha ... 31 5.2
AL590005-3|CAI14988.1| 5457|Homo sapiens dystonin protein. 31 5.2
AL590005-2|CAI14989.1| 7543|Homo sapiens dystonin protein. 31 5.2
AL512448-3|CAI16610.1| 5144|Homo sapiens dystonin protein. 31 5.2
AL512448-2|CAI16608.1| 5457|Homo sapiens dystonin protein. 31 5.2
AL512448-1|CAI16609.1| 7543|Homo sapiens dystonin protein. 31 5.2
AL512422-3|CAI14342.1| 5457|Homo sapiens dystonin protein. 31 5.2
AL512422-2|CAI14341.1| 7543|Homo sapiens dystonin protein. 31 5.2
AL137008-4|CAI20332.1| 5144|Homo sapiens dystonin protein. 31 5.2
AL137008-3|CAI20331.1| 5457|Homo sapiens dystonin protein. 31 5.2
AL137008-2|CAI20330.1| 7543|Homo sapiens dystonin protein. 31 5.2
AL096710-6|CAI22047.1| 2649|Homo sapiens dystonin protein. 31 5.2
AL096710-5|CAI22046.1| 3060|Homo sapiens dystonin protein. 31 5.2
AL096710-4|CAI22045.1| 5144|Homo sapiens dystonin protein. 31 5.2
AL096710-3|CAI22043.1| 5457|Homo sapiens dystonin protein. 31 5.2
AL096710-2|CAI22044.1| 7543|Homo sapiens dystonin protein. 31 5.2
AF400227-1|AAL62062.1| 3060|Homo sapiens bullous pemphigoid anti... 31 5.2
AF400226-1|AAL62061.1| 5171|Homo sapiens bullous pemphigoid anti... 31 5.2
AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-... 31 5.2
AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-... 31 5.2
AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-... 31 5.2
AB208844-1|BAD92081.1| 1017|Homo sapiens alpha 1 type XI collage... 31 5.2
AF228330-1|AAF86919.1| 140|Homo sapiens immunoglobulin light ch... 30 9.0
>BC032473-1|AAH32473.1| 778|Homo sapiens melanoma antigen family D,
1 protein.
Length = 778
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -1
Query: 686 PLWFPGTTVLPFPLKWVVPAAFQI--GWLLPRSWLLP 582
P+ +PG V P PL W P +Q GW P W P
Sbjct: 359 PIVWPGPVVWPNPLAWQNPPGWQTPPGWQTPPGWQGP 395
>BC014070-1|AAH14070.1| 834|Homo sapiens melanoma antigen family D,
1 protein.
Length = 834
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -1
Query: 686 PLWFPGTTVLPFPLKWVVPAAFQI--GWLLPRSWLLP 582
P+ +PG V P PL W P +Q GW P W P
Sbjct: 415 PIVWPGPVVWPNPLAWQNPPGWQTPPGWQTPPGWQGP 451
>AL929410-2|CAH71561.1| 834|Homo sapiens melanoma antigen family D,
1 protein.
Length = 834
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -1
Query: 686 PLWFPGTTVLPFPLKWVVPAAFQI--GWLLPRSWLLP 582
P+ +PG V P PL W P +Q GW P W P
Sbjct: 415 PIVWPGPVVWPNPLAWQNPPGWQTPPGWQTPPGWQGP 451
>AL929410-1|CAH71560.1| 778|Homo sapiens melanoma antigen family D,
1 protein.
Length = 778
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -1
Query: 686 PLWFPGTTVLPFPLKWVVPAAFQI--GWLLPRSWLLP 582
P+ +PG V P PL W P +Q GW P W P
Sbjct: 359 PIVWPGPVVWPNPLAWQNPPGWQTPPGWQTPPGWQGP 395
>AL133628-1|CAB63752.1| 476|Homo sapiens hypothetical protein
protein.
Length = 476
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -1
Query: 686 PLWFPGTTVLPFPLKWVVPAAFQI--GWLLPRSWLLP 582
P+ +PG V P PL W P +Q GW P W P
Sbjct: 57 PIVWPGPVVWPNPLAWQNPPGWQTPPGWQTPPGWQGP 93
>AK074092-1|BAB84918.1| 521|Homo sapiens FLJ00163 protein protein.
Length = 521
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -1
Query: 686 PLWFPGTTVLPFPLKWVVPAAFQI--GWLLPRSWLLP 582
P+ +PG V P PL W P +Q GW P W P
Sbjct: 373 PIVWPGPVVWPNPLAWQNPPGWQTPPGWQTPPGWQGP 409
>AF300328-1|AAQ14483.1| 778|Homo sapiens MAGE tumor antigen CCF
protein.
Length = 778
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -1
Query: 686 PLWFPGTTVLPFPLKWVVPAAFQI--GWLLPRSWLLP 582
P+ +PG V P PL W P +Q GW P W P
Sbjct: 359 PIVWPGPVVWPNPLAWQNPPGWQTPPGWQTPPGWQGP 395
>AF258554-1|AAG23757.1| 778|Homo sapiens PP2250 protein.
Length = 778
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -1
Query: 686 PLWFPGTTVLPFPLKWVVPAAFQI--GWLLPRSWLLP 582
P+ +PG V P PL W P +Q GW P W P
Sbjct: 359 PIVWPGPVVWPNPLAWQNPPGWQTPPGWQTPPGWQGP 395
>AF217963-1|AAG09704.1| 778|Homo sapiens NRAGE protein.
Length = 778
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -1
Query: 686 PLWFPGTTVLPFPLKWVVPAAFQI--GWLLPRSWLLP 582
P+ +PG V P PL W P +Q GW P W P
Sbjct: 359 PIVWPGPVVWPNPLAWQNPPGWQTPPGWQTPPGWQGP 395
>AF124440-1|AAD31421.1| 574|Homo sapiens MAGE tumor antigen D1
protein.
Length = 574
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -1
Query: 686 PLWFPGTTVLPFPLKWVVPAAFQI--GWLLPRSWLLP 582
P+ +PG V P PL W P +Q GW P W P
Sbjct: 155 PIVWPGPVVWPNPLAWQNPPGWQTPPGWQTPPGWQGP 191
>BC024009-1|AAH24009.3| 725|Homo sapiens leucine rich repeat
containing 50 protein.
Length = 725
Score = 31.9 bits (69), Expect = 2.2
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +2
Query: 257 VPAKNPHAPPPVSVKTTGPVWDIGQVLKAARLLCKPPQQVDFED 388
+PA+ P PPPV VK + L A LL PP +V ED
Sbjct: 442 LPAEAPPPPPPVEVKGEDGDQEPEGTLPAETLLLSPPVKVKGED 485
>AK058059-1|BAB71645.1| 524|Homo sapiens protein ( Homo sapiens
cDNA FLJ25330 fis, clone TST00576. ).
Length = 524
Score = 31.9 bits (69), Expect = 2.2
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +2
Query: 257 VPAKNPHAPPPVSVKTTGPVWDIGQVLKAARLLCKPPQQVDFED 388
+PA+ P PPPV VK + L A LL PP +V ED
Sbjct: 241 LPAEAPPPPPPVEVKGEDGDQEPEGTLPAETLLLSPPVKVKGED 284
>DQ523940-1|ABI35452.1| 122|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 122
Score = 31.5 bits (68), Expect = 3.0
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Frame = -1
Query: 671 GTTVLPFPLKWVVPAAFQ----IGWLLPRSWLLPWVLGFPATFSANSNQXIAQTYVTVSR 504
G T + + WV A Q +GW+ P+S + F S + I+ Y+ +SR
Sbjct: 25 GYTFTDYYVHWVRQAPGQGLEWMGWINPKSGGTNYAQKFQGRVSMTRDTTISTAYMELSR 84
Query: 503 VLWGKSARKLQYRPWPGSKTHYIG 432
+ A R W G + +Y G
Sbjct: 85 LRSDDMAVFYCARDWAGDRHYYYG 108
>J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein.
Length = 1806
Score = 31.1 bits (67), Expect = 3.9
Identities = 24/64 (37%), Positives = 26/64 (40%)
Frame = +2
Query: 494 PTVHGKPSHKFGLXPDWS*PRTSLGSPGPRAGAKNAVTTSLFGRPLGQPILREMGERLFL 673
P G P K G P P +GSPG R A A L GRP Q GE+
Sbjct: 1035 PGAQGAPGLKGGEGPQG--PPGPVGSPGERGSAGTAGPIGLRGRPGPQGPPGPAGEKGAP 1092
Query: 674 GTKG 685
G KG
Sbjct: 1093 GEKG 1096
>L11690-1|AAA52288.1| 2649|Homo sapiens bullous pemphigoid antigen
protein.
Length = 2649
Score = 30.7 bits (66), Expect = 5.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 651 SLKMGCPSGLPNRLVVTAFLAPALGPGLPSDVLG*LQSGNSPN 523
S+ G SG+ +RL T + PA PG PS ++ SG PN
Sbjct: 208 SMTSGLSSGMTSRL--TPSVTPAYTPGFPSGLVPNFSSGVEPN 248
>BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein.
Length = 1690
Score = 30.7 bits (66), Expect = 5.2
Identities = 24/64 (37%), Positives = 26/64 (40%)
Frame = +2
Query: 494 PTVHGKPSHKFGLXPDWS*PRTSLGSPGPRAGAKNAVTTSLFGRPLGQPILREMGERLFL 673
P G P K G P P +GSPG R A A L GRP Q GE+
Sbjct: 919 PGAQGAPGLKGGEGPQG--PPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAP 976
Query: 674 GTKG 685
G KG
Sbjct: 977 GEKG 980
>BC065536-1|AAH65536.1| 1143|Homo sapiens DST protein protein.
Length = 1143
Score = 30.7 bits (66), Expect = 5.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 651 SLKMGCPSGLPNRLVVTAFLAPALGPGLPSDVLG*LQSGNSPN 523
S+ G SG+ +RL T + PA PG PS ++ SG PN
Sbjct: 208 SMTSGLSSGMTSRL--TPSVTPAYTPGFPSGLVPNFSSGVEPN 248
>AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha 1
protein.
Length = 1806
Score = 30.7 bits (66), Expect = 5.2
Identities = 24/64 (37%), Positives = 26/64 (40%)
Frame = +2
Query: 494 PTVHGKPSHKFGLXPDWS*PRTSLGSPGPRAGAKNAVTTSLFGRPLGQPILREMGERLFL 673
P G P K G P P +GSPG R A A L GRP Q GE+
Sbjct: 1035 PGAQGAPGLKGGEGPQG--PPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAP 1092
Query: 674 GTKG 685
G KG
Sbjct: 1093 GEKG 1096
>AL590005-3|CAI14988.1| 5457|Homo sapiens dystonin protein.
Length = 5457
Score = 30.7 bits (66), Expect = 5.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 651 SLKMGCPSGLPNRLVVTAFLAPALGPGLPSDVLG*LQSGNSPN 523
S+ G SG+ +RL T + PA PG PS ++ SG PN
Sbjct: 534 SMTSGLSSGMTSRL--TPSVTPAYTPGFPSGLVPNFSSGVEPN 574
>AL590005-2|CAI14989.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 30.7 bits (66), Expect = 5.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 651 SLKMGCPSGLPNRLVVTAFLAPALGPGLPSDVLG*LQSGNSPN 523
S+ G SG+ +RL T + PA PG PS ++ SG PN
Sbjct: 534 SMTSGLSSGMTSRL--TPSVTPAYTPGFPSGLVPNFSSGVEPN 574
>AL512448-3|CAI16610.1| 5144|Homo sapiens dystonin protein.
Length = 5144
Score = 30.7 bits (66), Expect = 5.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 651 SLKMGCPSGLPNRLVVTAFLAPALGPGLPSDVLG*LQSGNSPN 523
S+ G SG+ +RL T + PA PG PS ++ SG PN
Sbjct: 208 SMTSGLSSGMTSRL--TPSVTPAYTPGFPSGLVPNFSSGVEPN 248
>AL512448-2|CAI16608.1| 5457|Homo sapiens dystonin protein.
Length = 5457
Score = 30.7 bits (66), Expect = 5.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 651 SLKMGCPSGLPNRLVVTAFLAPALGPGLPSDVLG*LQSGNSPN 523
S+ G SG+ +RL T + PA PG PS ++ SG PN
Sbjct: 534 SMTSGLSSGMTSRL--TPSVTPAYTPGFPSGLVPNFSSGVEPN 574
>AL512448-1|CAI16609.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 30.7 bits (66), Expect = 5.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 651 SLKMGCPSGLPNRLVVTAFLAPALGPGLPSDVLG*LQSGNSPN 523
S+ G SG+ +RL T + PA PG PS ++ SG PN
Sbjct: 534 SMTSGLSSGMTSRL--TPSVTPAYTPGFPSGLVPNFSSGVEPN 574
>AL512422-3|CAI14342.1| 5457|Homo sapiens dystonin protein.
Length = 5457
Score = 30.7 bits (66), Expect = 5.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 651 SLKMGCPSGLPNRLVVTAFLAPALGPGLPSDVLG*LQSGNSPN 523
S+ G SG+ +RL T + PA PG PS ++ SG PN
Sbjct: 534 SMTSGLSSGMTSRL--TPSVTPAYTPGFPSGLVPNFSSGVEPN 574
>AL512422-2|CAI14341.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 30.7 bits (66), Expect = 5.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 651 SLKMGCPSGLPNRLVVTAFLAPALGPGLPSDVLG*LQSGNSPN 523
S+ G SG+ +RL T + PA PG PS ++ SG PN
Sbjct: 534 SMTSGLSSGMTSRL--TPSVTPAYTPGFPSGLVPNFSSGVEPN 574
>AL137008-4|CAI20332.1| 5144|Homo sapiens dystonin protein.
Length = 5144
Score = 30.7 bits (66), Expect = 5.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 651 SLKMGCPSGLPNRLVVTAFLAPALGPGLPSDVLG*LQSGNSPN 523
S+ G SG+ +RL T + PA PG PS ++ SG PN
Sbjct: 208 SMTSGLSSGMTSRL--TPSVTPAYTPGFPSGLVPNFSSGVEPN 248
>AL137008-3|CAI20331.1| 5457|Homo sapiens dystonin protein.
Length = 5457
Score = 30.7 bits (66), Expect = 5.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 651 SLKMGCPSGLPNRLVVTAFLAPALGPGLPSDVLG*LQSGNSPN 523
S+ G SG+ +RL T + PA PG PS ++ SG PN
Sbjct: 534 SMTSGLSSGMTSRL--TPSVTPAYTPGFPSGLVPNFSSGVEPN 574
>AL137008-2|CAI20330.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 30.7 bits (66), Expect = 5.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 651 SLKMGCPSGLPNRLVVTAFLAPALGPGLPSDVLG*LQSGNSPN 523
S+ G SG+ +RL T + PA PG PS ++ SG PN
Sbjct: 534 SMTSGLSSGMTSRL--TPSVTPAYTPGFPSGLVPNFSSGVEPN 574
>AL096710-6|CAI22047.1| 2649|Homo sapiens dystonin protein.
Length = 2649
Score = 30.7 bits (66), Expect = 5.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 651 SLKMGCPSGLPNRLVVTAFLAPALGPGLPSDVLG*LQSGNSPN 523
S+ G SG+ +RL T + PA PG PS ++ SG PN
Sbjct: 208 SMTSGLSSGMTSRL--TPSVTPAYTPGFPSGLVPNFSSGVEPN 248
>AL096710-5|CAI22046.1| 3060|Homo sapiens dystonin protein.
Length = 3060
Score = 30.7 bits (66), Expect = 5.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 651 SLKMGCPSGLPNRLVVTAFLAPALGPGLPSDVLG*LQSGNSPN 523
S+ G SG+ +RL T + PA PG PS ++ SG PN
Sbjct: 208 SMTSGLSSGMTSRL--TPSVTPAYTPGFPSGLVPNFSSGVEPN 248
>AL096710-4|CAI22045.1| 5144|Homo sapiens dystonin protein.
Length = 5144
Score = 30.7 bits (66), Expect = 5.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 651 SLKMGCPSGLPNRLVVTAFLAPALGPGLPSDVLG*LQSGNSPN 523
S+ G SG+ +RL T + PA PG PS ++ SG PN
Sbjct: 208 SMTSGLSSGMTSRL--TPSVTPAYTPGFPSGLVPNFSSGVEPN 248
>AL096710-3|CAI22043.1| 5457|Homo sapiens dystonin protein.
Length = 5457
Score = 30.7 bits (66), Expect = 5.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 651 SLKMGCPSGLPNRLVVTAFLAPALGPGLPSDVLG*LQSGNSPN 523
S+ G SG+ +RL T + PA PG PS ++ SG PN
Sbjct: 534 SMTSGLSSGMTSRL--TPSVTPAYTPGFPSGLVPNFSSGVEPN 574
>AL096710-2|CAI22044.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 30.7 bits (66), Expect = 5.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 651 SLKMGCPSGLPNRLVVTAFLAPALGPGLPSDVLG*LQSGNSPN 523
S+ G SG+ +RL T + PA PG PS ++ SG PN
Sbjct: 534 SMTSGLSSGMTSRL--TPSVTPAYTPGFPSGLVPNFSSGVEPN 574
>AF400227-1|AAL62062.1| 3060|Homo sapiens bullous pemphigoid antigen
1 eB protein.
Length = 3060
Score = 30.7 bits (66), Expect = 5.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 651 SLKMGCPSGLPNRLVVTAFLAPALGPGLPSDVLG*LQSGNSPN 523
S+ G SG+ +RL T + PA PG PS ++ SG PN
Sbjct: 208 SMTSGLSSGMTSRL--TPSVTPAYTPGFPSGLVPNFSSGVEPN 248
>AF400226-1|AAL62061.1| 5171|Homo sapiens bullous pemphigoid antigen
1 eA protein.
Length = 5171
Score = 30.7 bits (66), Expect = 5.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 651 SLKMGCPSGLPNRLVVTAFLAPALGPGLPSDVLG*LQSGNSPN 523
S+ G SG+ +RL T + PA PG PS ++ SG PN
Sbjct: 208 SMTSGLSSGMTSRL--TPSVTPAYTPGFPSGLVPNFSSGVEPN 248
>AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-1
protein.
Length = 1767
Score = 30.7 bits (66), Expect = 5.2
Identities = 24/64 (37%), Positives = 26/64 (40%)
Frame = +2
Query: 494 PTVHGKPSHKFGLXPDWS*PRTSLGSPGPRAGAKNAVTTSLFGRPLGQPILREMGERLFL 673
P G P K G P P +GSPG R A A L GRP Q GE+
Sbjct: 996 PGAQGAPGLKGGEGPQG--PPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAP 1053
Query: 674 GTKG 685
G KG
Sbjct: 1054 GEKG 1057
>AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-a
isoform B protein.
Length = 1818
Score = 30.7 bits (66), Expect = 5.2
Identities = 24/64 (37%), Positives = 26/64 (40%)
Frame = +2
Query: 494 PTVHGKPSHKFGLXPDWS*PRTSLGSPGPRAGAKNAVTTSLFGRPLGQPILREMGERLFL 673
P G P K G P P +GSPG R A A L GRP Q GE+
Sbjct: 1047 PGAQGAPGLKGGEGPQG--PPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAP 1104
Query: 674 GTKG 685
G KG
Sbjct: 1105 GEKG 1108
>AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-1
isoform A protein.
Length = 1806
Score = 30.7 bits (66), Expect = 5.2
Identities = 24/64 (37%), Positives = 26/64 (40%)
Frame = +2
Query: 494 PTVHGKPSHKFGLXPDWS*PRTSLGSPGPRAGAKNAVTTSLFGRPLGQPILREMGERLFL 673
P G P K G P P +GSPG R A A L GRP Q GE+
Sbjct: 1035 PGAQGAPGLKGGEGPQG--PPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAP 1092
Query: 674 GTKG 685
G KG
Sbjct: 1093 GEKG 1096
>AB208844-1|BAD92081.1| 1017|Homo sapiens alpha 1 type XI collagen
isoform C preproprotein variant protein.
Length = 1017
Score = 30.7 bits (66), Expect = 5.2
Identities = 24/64 (37%), Positives = 26/64 (40%)
Frame = +2
Query: 494 PTVHGKPSHKFGLXPDWS*PRTSLGSPGPRAGAKNAVTTSLFGRPLGQPILREMGERLFL 673
P G P K G P P +GSPG R A A L GRP Q GE+
Sbjct: 246 PGAQGAPGLKGGEGPQG--PPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAP 303
Query: 674 GTKG 685
G KG
Sbjct: 304 GEKG 307
>AF228330-1|AAF86919.1| 140|Homo sapiens immunoglobulin light chain
variable region protein.
Length = 140
Score = 29.9 bits (64), Expect = 9.0
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = -1
Query: 587 LPWVLGFPATFSANSNQXIA----QTYVTVSRVLWGKSARKLQYR 465
LP LG PA+ S SNQ +A TY+ + G+S R+L Y+
Sbjct: 34 LPVTLGQPASISCRSNQSLAHSDGNTYLNWFQQRPGRSPRRLLYK 78
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,861,274
Number of Sequences: 237096
Number of extensions: 2457783
Number of successful extensions: 6818
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 6423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6818
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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