Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0487.Seq
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   3.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.5  
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    22   5.5  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   7.3  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    21   7.3  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   7.3  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   9.6  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   9.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.6  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   9.6  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   9.6  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   9.6  
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    21   9.6  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   9.6  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 546 CRFSFSLRENEPCHDDANNC 605
           C  S ++ +N PC D+  +C
Sbjct: 3   CSESKAICDNPPCDDEVESC 22


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -1

Query: 631  PTQSTLYPGQLLASSWQGSFSRKLKEKRQRCS 536
            PT +   PG +LA SW  + +    +   +C+
Sbjct: 1026 PTNAGTTPGAILAFSWACNDAVMTSDSIMKCA 1057


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 456 SVIARPRRMAGRTYAYPSHNQPSR*EALHRC 548
           S++A  R + G     PS+N     + L RC
Sbjct: 21  SIVAEMREVLGDLSKKPSYNDLQNLKYLERC 51


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 664 SLSNFIQAMSSPTQSTLYPGQLLASS 587
           ++ + + A+S  T STL PG+   SS
Sbjct: 44  NIESHLNAISQITNSTLDPGRKSPSS 69


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +3

Query: 651 KFDKDGVFR 677
           K+DKDGV+R
Sbjct: 107 KYDKDGVYR 115


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 128 RPSHPIPFSFIPVD 87
           +PS  I FS IPVD
Sbjct: 418 KPSFVIQFSHIPVD 431


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/31 (29%), Positives = 13/31 (41%)
 Frame = +3

Query: 546 CRFSFSLRENEPCHDDANNCPGYKVDCVGDD 638
           CR++F L           +CP    DC  +D
Sbjct: 57  CRYTFLLEWYHTLSKACYDCPYNTQDCYRED 87


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -1

Query: 691 SGLMARNTPSLSNFIQAMSSPTQSTLYPG 605
           SG +  +T S  NF    SSP    +Y G
Sbjct: 3   SGGLRNDTYSDDNFSDDESSPLTENIYGG 31


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -1

Query: 691 SGLMARNTPSLSNFIQAMSSPTQSTLYPG 605
           SG +  +T S  NF    SSP    +Y G
Sbjct: 3   SGGLRNDTYSDDNFSDDESSPLTENIYGG 31


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -1

Query: 691 SGLMARNTPSLSNFIQAMSSPTQSTLYPG 605
           SG +  +T S  NF    SSP    +Y G
Sbjct: 3   SGGLRNDTYSDDNFSDDESSPLTENIYGG 31


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -1

Query: 691 SGLMARNTPSLSNFIQAMSSPTQSTLYPG 605
           SG +  +T S  NF    SSP    +Y G
Sbjct: 3   SGGLRNDTYSDDNFSDDESSPLTENIYGG 31


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 130 TMYVIPFSMGPVGSP 174
           +M ++P+ M P G P
Sbjct: 283 SMNIVPYHMSPYGHP 297


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 130 TMYVIPFSMGPVGSP 174
           +M ++P+ M P G P
Sbjct: 283 SMNIVPYHMSPYGHP 297


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/33 (27%), Positives = 13/33 (39%)
 Frame = -1

Query: 133 LCVHLIPFHLVSSQLIT*FFKLVIFISFHFTLY 35
           LC+     HL+    I  F+   I  + H   Y
Sbjct: 197 LCLDYFTLHLLFLPCIYYFYSAFIIFTIHLLFY 229


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 130 TMYVIPFSMGPVGSP 174
           +M ++P+ M P G P
Sbjct: 283 SMNIVPYHMSPYGHP 297


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 130 TMYVIPFSMGPVGSP 174
           +M ++P+ M P G P
Sbjct: 239 SMNIVPYHMSPYGHP 253


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 130 TMYVIPFSMGPVGSP 174
           +M ++P+ M P G P
Sbjct: 283 SMNIVPYHMSPYGHP 297


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 130 TMYVIPFSMGPVGSP 174
           +M ++P+ M P G P
Sbjct: 71  SMNIVPYHMSPYGHP 85


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 130 TMYVIPFSMGPVGSP 174
           +M ++P+ M P G P
Sbjct: 283 SMNIVPYHMSPYGHP 297


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,498
Number of Sequences: 336
Number of extensions: 3346
Number of successful extensions: 21
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)