Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0487.Seq
(697 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37397| Best HMM Match : PEPCK (HMM E-Value=0) 131 6e-31
SB_37396| Best HMM Match : PEPCK (HMM E-Value=0) 100 1e-21
SB_3810| Best HMM Match : PEPCK (HMM E-Value=0) 99 4e-21
SB_51020| Best HMM Match : BDV_P10 (HMM E-Value=1.9) 29 2.7
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_37209| Best HMM Match : Ion_trans (HMM E-Value=1.7e-05) 29 3.6
SB_31720| Best HMM Match : Peptidase_M10 (HMM E-Value=1e-30) 29 3.6
SB_15741| Best HMM Match : MANEC (HMM E-Value=2.7) 28 6.3
SB_9163| Best HMM Match : XS (HMM E-Value=0.84) 28 6.3
>SB_37397| Best HMM Match : PEPCK (HMM E-Value=0)
Length = 613
Score = 131 bits (316), Expect = 6e-31
Identities = 84/177 (47%), Positives = 99/177 (55%), Gaps = 12/177 (6%)
Frame = +1
Query: 124 GRTMYVIPFSMGPVGSPLSKIGVEITDSPYVVYSMRVMTRIGAKF*KFYVKTSSSFVVFT 303
GRTMYV+PFSMGPVGSP+SKIG+++TDS YVV MR+MTR+G+ K FV
Sbjct: 128 GRTMYVLPFSMGPVGSPISKIGIQLTDSEYVVCCMRIMTRMGSHVLK--ALGDGDFVRGV 185
Query: 304 QSAPVALRVGPAXXXXXXXXXXXXXXXXXAT-----------AVDTAAIVCWA-RSASLY 447
S L+ G AT C+A R AS
Sbjct: 186 HSVGFPLKEGVKEVPWPCDPERTLITHFPATREIKSYGSGYGGNSLLGKKCFALRIASNI 245
Query: 448 VWDQ*SLVREGWLAEHMLIRRITNPQGKKRYIAAAFPSACGKTNLAMMTPTIAPGTK 618
D+ GWLAEHM+I +TNP+GKK YIAAAFPSACGKTNLAM+TPTI PG K
Sbjct: 246 AHDE------GWLAEHMMIMGLTNPEGKKIYIAAAFPSACGKTNLAMLTPTI-PGWK 295
Score = 89.4 bits (212), Expect = 2e-18
Identities = 58/154 (37%), Positives = 70/154 (45%), Gaps = 5/154 (3%)
Frame = +3
Query: 249 SEVLEILRQDEQFVRCLHAVGSGGTPG-----WPCDPKNTIILHKPAENEIVXXXXXXXX 413
S VL+ L D FVR +H+VG G WPCDP+ T+I H PA EI
Sbjct: 170 SHVLKALG-DGDFVRGVHSVGFPLKEGVKEVPWPCDPERTLITHFPATREIKSYGSGYGG 228
Query: 414 XXXXXKKCFALRLGSVIARPRRMAGRTYAYPSHNQPSR*EALHRCRFSFSLRENEPCHDD 593
KKCFALR+ S IA P + F + +
Sbjct: 229 NSLLGKKCFALRIASNIAHDEGWLAEHMMIMGLTNPEGKKIYIAAAFPSACGKTNLAMLT 288
Query: 594 ANNCPGYKVDCVGDDIAWMKFDKDGVFRAINPEN 695
PG+K +CVGDDI WM FDKDG RAINPE+
Sbjct: 289 PT-IPGWKCECVGDDINWMWFDKDGTLRAINPES 321
>SB_37396| Best HMM Match : PEPCK (HMM E-Value=0)
Length = 549
Score = 100 bits (239), Expect = 1e-21
Identities = 62/153 (40%), Positives = 72/153 (47%), Gaps = 5/153 (3%)
Frame = +3
Query: 249 SEVLEILRQDEQFVRCLHAVGSGGTPG-----WPCDPKNTIILHKPAENEIVXXXXXXXX 413
S VL+ L D FVRCLH+VG G WPCDP+ T+I H P EI
Sbjct: 40 SHVLKALG-DGDFVRCLHSVGGPLHDGKNNVPWPCDPERTLITHFPETREIKSYGSGYGG 98
Query: 414 XXXXXKKCFALRLGSVIARPRRMAGRTYAYPSHNQPSR*EALHRCRFSFSLRENEPCHDD 593
KKCFALR+ SVIAR P + F + +
Sbjct: 99 NSLLGKKCFALRIASVIARDEGWLAEHMMILGLTNPEGKKIYIAAAFPSACGKTNLAM-L 157
Query: 594 ANNCPGYKVDCVGDDIAWMKFDKDGVFRAINPE 692
PG+K +CVGDDIAWM FDKDG RAINPE
Sbjct: 158 TPTIPGWKCECVGDDIAWMWFDKDGTLRAINPE 190
Score = 85.0 bits (201), Expect = 5e-17
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = +1
Query: 475 EGWLAEHMLIRRITNPQGKKRYIAAAFPSACGKTNLAMMTPTIAPGTK 618
EGWLAEHM+I +TNP+GKK YIAAAFPSACGKTNLAM+TPTI PG K
Sbjct: 119 EGWLAEHMMILGLTNPEGKKIYIAAAFPSACGKTNLAMLTPTI-PGWK 165
Score = 70.9 bits (166), Expect = 9e-13
Identities = 30/40 (75%), Positives = 37/40 (92%)
Frame = +1
Query: 133 MYVIPFSMGPVGSPLSKIGVEITDSPYVVYSMRVMTRIGA 252
MYV+PFSMGPVGSP+SKIG+E+TDS YVV MR+MTR+G+
Sbjct: 1 MYVMPFSMGPVGSPISKIGIELTDSEYVVCCMRIMTRMGS 40
>SB_3810| Best HMM Match : PEPCK (HMM E-Value=0)
Length = 707
Score = 98.7 bits (235), Expect = 4e-21
Identities = 62/154 (40%), Positives = 74/154 (48%), Gaps = 5/154 (3%)
Frame = +3
Query: 249 SEVLEILRQDEQFVRCLHAVGSGGTPG-----WPCDPKNTIILHKPAENEIVXXXXXXXX 413
S VL+ L Q + FV+CLH+VG G WPCDP TII H PA+N I
Sbjct: 354 SHVLKALDQGD-FVKCLHSVGKPLKEGEKDVLWPCDPDRTIITHFPADNYIKSFGSGYGG 412
Query: 414 XXXXXKKCFALRLGSVIARPRRMAGRTYAYPSHNQPSR*EALHRCRFSFSLRENEPCHDD 593
KKCFALR+ S IA + P + F + +
Sbjct: 413 NSLLGKKCFALRIASNIALKEGWLAEHMLIMALTNPEGKKKYIAAAFPSACGKTNLAMLK 472
Query: 594 ANNCPGYKVDCVGDDIAWMKFDKDGVFRAINPEN 695
PG+KVDCVGDDIAWM FDK G RAINPE+
Sbjct: 473 P-TIPGWKVDCVGDDIAWMWFDKTGQLRAINPES 505
Score = 87.4 bits (207), Expect = 1e-17
Identities = 39/50 (78%), Positives = 45/50 (90%)
Frame = +1
Query: 469 VREGWLAEHMLIRRITNPQGKKRYIAAAFPSACGKTNLAMMTPTIAPGTK 618
++EGWLAEHMLI +TNP+GKK+YIAAAFPSACGKTNLAM+ PTI PG K
Sbjct: 431 LKEGWLAEHMLIMALTNPEGKKKYIAAAFPSACGKTNLAMLKPTI-PGWK 479
Score = 55.2 bits (127), Expect = 5e-08
Identities = 22/34 (64%), Positives = 31/34 (91%)
Frame = +1
Query: 151 SMGPVGSPLSKIGVEITDSPYVVYSMRVMTRIGA 252
+MGPVGSP++KIG+++TDS YVV MR+MTR+G+
Sbjct: 321 NMGPVGSPIAKIGIQLTDSEYVVCCMRIMTRMGS 354
>SB_51020| Best HMM Match : BDV_P10 (HMM E-Value=1.9)
Length = 576
Score = 29.5 bits (63), Expect = 2.7
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 2/83 (2%)
Frame = -2
Query: 663 PCRTSSRLCRPPRNLLC--TRGNCWRHHGKVRFPAS*RKSGSDVALLTLRVGYATDKHMF 490
PCR S P +LL T G C ++ + P + +S A++ LR +DK
Sbjct: 269 PCRAS-----PKDSLLAKATVGPCQKNRPRRLLPKTPLESEGAPAMIPLRAPLRSDKDDL 323
Query: 489 GQPSFADERSLIPDVERSTSCPT 421
P + + D E +T PT
Sbjct: 324 NSPPLTPDETTSRDAESTTPEPT 346
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 427 ARSASLYVWDQ*SLVREG-WLAEHMLIRRITNPQGKKRYIAAAFPSACGKTNLAMMTPT 600
AR+A LY D + R G W A + + G K+YI+A AC +L +M T
Sbjct: 1792 ARNARLYAEDDYNTKRVGAWCAADSDEQWLQIDLGMKKYISAVATQACHGDHLVVMVLT 1850
>SB_37209| Best HMM Match : Ion_trans (HMM E-Value=1.7e-05)
Length = 822
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -2
Query: 672 IRRPCRTSSRLCRPPRNLLC-TRGNCWRHHGKVRFPAS*RKS 550
+R C+ S+R C PR + C T W + G RF RKS
Sbjct: 650 VRLLCKLSNRCCGVPRKVPCLTESQVWDYDGG-RFDVEHRKS 690
>SB_31720| Best HMM Match : Peptidase_M10 (HMM E-Value=1e-30)
Length = 284
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 576 EPCHDDANNCPGYKVDCVGDD 638
EPC D+ +CPG+ C DD
Sbjct: 251 EPCVDNYKSCPGWTAYCNNDD 271
>SB_15741| Best HMM Match : MANEC (HMM E-Value=2.7)
Length = 263
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = -2
Query: 342 GRRANPECHRSRLREDNERTARLDVEFLELRSNSSHDSHRIN-HVRRIRDFY-ADLRERR 169
GRRA+PE + L + R E +++S + R+N R R +++ +
Sbjct: 127 GRRADPESNTDNLTKTKRRKRLFGGNQTEPVTDASLNEKRLNERFREHRSVIDSNVEDSA 186
Query: 168 SHRTHREWYHVH 133
S R H E + VH
Sbjct: 187 STRRHHERFQVH 198
>SB_9163| Best HMM Match : XS (HMM E-Value=0.84)
Length = 424
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -2
Query: 663 PC-RTSSRLCRPPRNLLCTRGNCWRHHGK 580
PC R+ R C+P +LC R N +R GK
Sbjct: 368 PCPRSCDRYCKPNCPILCCRSNPFRVKGK 396
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,579,582
Number of Sequences: 59808
Number of extensions: 458802
Number of successful extensions: 1642
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1639
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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