Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0487.Seq
(697 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83122-8|CAF31484.1| 582|Caenorhabditis elegans Hypothetical pr... 89 4e-18
Z83122-7|CAF31483.1| 618|Caenorhabditis elegans Hypothetical pr... 89 4e-18
Z83122-6|CAF31482.1| 587|Caenorhabditis elegans Hypothetical pr... 89 4e-18
Z83122-5|CAB05600.1| 654|Caenorhabditis elegans Hypothetical pr... 89 4e-18
AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical ... 83 1e-16
AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical ... 83 1e-16
AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical ... 83 1e-16
AF040660-7|AAN65287.1| 366|Caenorhabditis elegans Hypothetical ... 62 4e-10
AF125442-11|AAD12791.1| 624|Caenorhabditis elegans Hypothetical... 54 1e-07
Z81532-5|CAE17816.1| 101|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z71178-8|CAA94882.1| 552|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z32673-1|CAA83585.1| 472|Caenorhabditis elegans transcription f... 28 7.3
U41535-12|AAK67251.1| 438|Caenorhabditis elegans Abnormal cell ... 28 7.3
AJ130957-1|CAA10262.1| 438|Caenorhabditis elegans LIN-26B protein. 28 7.3
AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical ... 28 7.3
U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein. 27 9.7
U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein. 27 9.7
AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell... 27 9.7
AC084159-10|AAK39362.1| 310|Caenorhabditis elegans Hypothetical... 27 9.7
>Z83122-8|CAF31484.1| 582|Caenorhabditis elegans Hypothetical
protein R11A5.4b protein.
Length = 582
Score = 88.6 bits (210), Expect = 4e-18
Identities = 52/145 (35%), Positives = 68/145 (46%), Gaps = 6/145 (4%)
Frame = +3
Query: 276 DEQFVRCLHAVG------SGGTPGWPCDPKNTIILHKPAENEIVXXXXXXXXXXXXXKKC 437
++ FVRC+H+VG WPC+P+ +I H+P E EI KKC
Sbjct: 217 NQDFVRCIHSVGLPRPVKQRVINHWPCNPERVLIAHRPPEREIWSFGSGYGGNSLLGKKC 276
Query: 438 FALRLGSVIARPRRMAGRTYAYPSHNQPSR*EALHRCRFSFSLRENEPCHDDANNCPGYK 617
FALR+ S IA+ +P E F + + + PG+K
Sbjct: 277 FALRIASNIAKDEGWMAEHMLIMGVTRPCGREHFIAAAFPSACGKTNLAMLEPT-LPGWK 335
Query: 618 VDCVGDDIAWMKFDKDGVFRAINPE 692
V CVGDDIAWMKF +DG AINPE
Sbjct: 336 VRCVGDDIAWMKFGEDGRLYAINPE 360
Score = 74.9 bits (176), Expect = 5e-14
Identities = 33/48 (68%), Positives = 40/48 (83%)
Frame = +1
Query: 475 EGWLAEHMLIRRITNPQGKKRYIAAAFPSACGKTNLAMMTPTIAPGTK 618
EGW+AEHMLI +T P G++ +IAAAFPSACGKTNLAM+ PT+ PG K
Sbjct: 289 EGWMAEHMLIMGVTRPCGREHFIAAAFPSACGKTNLAMLEPTL-PGWK 335
Score = 74.1 bits (174), Expect = 9e-14
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = +1
Query: 124 GRTMYVIPFSMGPVGSPLSKIGVEITDSPYVVYSMRVMTRI 246
GR MYVIPFSMGPVG PLSKIG+++TDS YVV SMR+MTR+
Sbjct: 167 GRIMYVIPFSMGPVGGPLSKIGIQLTDSNYVVLSMRIMTRV 207
>Z83122-7|CAF31483.1| 618|Caenorhabditis elegans Hypothetical
protein R11A5.4d protein.
Length = 618
Score = 88.6 bits (210), Expect = 4e-18
Identities = 52/145 (35%), Positives = 68/145 (46%), Gaps = 6/145 (4%)
Frame = +3
Query: 276 DEQFVRCLHAVG------SGGTPGWPCDPKNTIILHKPAENEIVXXXXXXXXXXXXXKKC 437
++ FVRC+H+VG WPC+P+ +I H+P E EI KKC
Sbjct: 181 NQDFVRCIHSVGLPRPVKQRVINHWPCNPERVLIAHRPPEREIWSFGSGYGGNSLLGKKC 240
Query: 438 FALRLGSVIARPRRMAGRTYAYPSHNQPSR*EALHRCRFSFSLRENEPCHDDANNCPGYK 617
FALR+ S IA+ +P E F + + + PG+K
Sbjct: 241 FALRIASNIAKDEGWMAEHMLIMGVTRPCGREHFIAAAFPSACGKTNLAMLEPT-LPGWK 299
Query: 618 VDCVGDDIAWMKFDKDGVFRAINPE 692
V CVGDDIAWMKF +DG AINPE
Sbjct: 300 VRCVGDDIAWMKFGEDGRLYAINPE 324
Score = 74.9 bits (176), Expect = 5e-14
Identities = 33/48 (68%), Positives = 40/48 (83%)
Frame = +1
Query: 475 EGWLAEHMLIRRITNPQGKKRYIAAAFPSACGKTNLAMMTPTIAPGTK 618
EGW+AEHMLI +T P G++ +IAAAFPSACGKTNLAM+ PT+ PG K
Sbjct: 253 EGWMAEHMLIMGVTRPCGREHFIAAAFPSACGKTNLAMLEPTL-PGWK 299
Score = 74.1 bits (174), Expect = 9e-14
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = +1
Query: 124 GRTMYVIPFSMGPVGSPLSKIGVEITDSPYVVYSMRVMTRI 246
GR MYVIPFSMGPVG PLSKIG+++TDS YVV SMR+MTR+
Sbjct: 131 GRIMYVIPFSMGPVGGPLSKIGIQLTDSNYVVLSMRIMTRV 171
>Z83122-6|CAF31482.1| 587|Caenorhabditis elegans Hypothetical
protein R11A5.4c protein.
Length = 587
Score = 88.6 bits (210), Expect = 4e-18
Identities = 52/145 (35%), Positives = 68/145 (46%), Gaps = 6/145 (4%)
Frame = +3
Query: 276 DEQFVRCLHAVG------SGGTPGWPCDPKNTIILHKPAENEIVXXXXXXXXXXXXXKKC 437
++ FVRC+H+VG WPC+P+ +I H+P E EI KKC
Sbjct: 150 NQDFVRCIHSVGLPRPVKQRVINHWPCNPERVLIAHRPPEREIWSFGSGYGGNSLLGKKC 209
Query: 438 FALRLGSVIARPRRMAGRTYAYPSHNQPSR*EALHRCRFSFSLRENEPCHDDANNCPGYK 617
FALR+ S IA+ +P E F + + + PG+K
Sbjct: 210 FALRIASNIAKDEGWMAEHMLIMGVTRPCGREHFIAAAFPSACGKTNLAMLEPT-LPGWK 268
Query: 618 VDCVGDDIAWMKFDKDGVFRAINPE 692
V CVGDDIAWMKF +DG AINPE
Sbjct: 269 VRCVGDDIAWMKFGEDGRLYAINPE 293
Score = 74.9 bits (176), Expect = 5e-14
Identities = 33/48 (68%), Positives = 40/48 (83%)
Frame = +1
Query: 475 EGWLAEHMLIRRITNPQGKKRYIAAAFPSACGKTNLAMMTPTIAPGTK 618
EGW+AEHMLI +T P G++ +IAAAFPSACGKTNLAM+ PT+ PG K
Sbjct: 222 EGWMAEHMLIMGVTRPCGREHFIAAAFPSACGKTNLAMLEPTL-PGWK 268
Score = 74.1 bits (174), Expect = 9e-14
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = +1
Query: 124 GRTMYVIPFSMGPVGSPLSKIGVEITDSPYVVYSMRVMTRI 246
GR MYVIPFSMGPVG PLSKIG+++TDS YVV SMR+MTR+
Sbjct: 100 GRIMYVIPFSMGPVGGPLSKIGIQLTDSNYVVLSMRIMTRV 140
>Z83122-5|CAB05600.1| 654|Caenorhabditis elegans Hypothetical
protein R11A5.4a protein.
Length = 654
Score = 88.6 bits (210), Expect = 4e-18
Identities = 52/145 (35%), Positives = 68/145 (46%), Gaps = 6/145 (4%)
Frame = +3
Query: 276 DEQFVRCLHAVG------SGGTPGWPCDPKNTIILHKPAENEIVXXXXXXXXXXXXXKKC 437
++ FVRC+H+VG WPC+P+ +I H+P E EI KKC
Sbjct: 217 NQDFVRCIHSVGLPRPVKQRVINHWPCNPERVLIAHRPPEREIWSFGSGYGGNSLLGKKC 276
Query: 438 FALRLGSVIARPRRMAGRTYAYPSHNQPSR*EALHRCRFSFSLRENEPCHDDANNCPGYK 617
FALR+ S IA+ +P E F + + + PG+K
Sbjct: 277 FALRIASNIAKDEGWMAEHMLIMGVTRPCGREHFIAAAFPSACGKTNLAMLEPT-LPGWK 335
Query: 618 VDCVGDDIAWMKFDKDGVFRAINPE 692
V CVGDDIAWMKF +DG AINPE
Sbjct: 336 VRCVGDDIAWMKFGEDGRLYAINPE 360
Score = 74.9 bits (176), Expect = 5e-14
Identities = 33/48 (68%), Positives = 40/48 (83%)
Frame = +1
Query: 475 EGWLAEHMLIRRITNPQGKKRYIAAAFPSACGKTNLAMMTPTIAPGTK 618
EGW+AEHMLI +T P G++ +IAAAFPSACGKTNLAM+ PT+ PG K
Sbjct: 289 EGWMAEHMLIMGVTRPCGREHFIAAAFPSACGKTNLAMLEPTL-PGWK 335
Score = 74.1 bits (174), Expect = 9e-14
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = +1
Query: 124 GRTMYVIPFSMGPVGSPLSKIGVEITDSPYVVYSMRVMTRI 246
GR MYVIPFSMGPVG PLSKIG+++TDS YVV SMR+MTR+
Sbjct: 167 GRIMYVIPFSMGPVGGPLSKIGIQLTDSNYVVLSMRIMTRV 207
>AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical
protein W05G11.6d protein.
Length = 594
Score = 83.4 bits (197), Expect = 1e-16
Identities = 55/154 (35%), Positives = 67/154 (43%), Gaps = 6/154 (3%)
Frame = +3
Query: 249 SEVLEILRQDEQFVRCLHAVG------SGGTPGWPCDPKNTIILHKPAENEIVXXXXXXX 410
++VLE L D FVRC+H+VG WPC+P+ +I H+P E EI
Sbjct: 196 TKVLEALG-DNDFVRCIHSVGLPRPVKQKVINHWPCNPEKVMIAHRPKEREIWSFGSGYG 254
Query: 411 XXXXXXKKCFALRLGSVIARPRRMAGRTYAYPSHNQPSR*EALHRCRFSFSLRENEPCHD 590
KKCFALR+ I R P E F + +
Sbjct: 255 GNSILGKKCFALRIACNIGRDEGWLAEHMLIMGVTNPEGEEKFIAAAFPSACGKTNLAML 314
Query: 591 DANNCPGYKVDCVGDDIAWMKFDKDGVFRAINPE 692
PG+KV VGDDIAWMKF DG AINPE
Sbjct: 315 TPT-VPGWKVRVVGDDIAWMKFGADGRLYAINPE 347
Score = 83.4 bits (197), Expect = 1e-16
Identities = 36/48 (75%), Positives = 44/48 (91%)
Frame = +1
Query: 475 EGWLAEHMLIRRITNPQGKKRYIAAAFPSACGKTNLAMMTPTIAPGTK 618
EGWLAEHMLI +TNP+G++++IAAAFPSACGKTNLAM+TPT+ PG K
Sbjct: 276 EGWLAEHMLIMGVTNPEGEEKFIAAAFPSACGKTNLAMLTPTV-PGWK 322
Score = 74.5 bits (175), Expect = 6e-14
Identities = 31/44 (70%), Positives = 37/44 (84%)
Frame = +1
Query: 124 GRTMYVIPFSMGPVGSPLSKIGVEITDSPYVVYSMRVMTRIGAK 255
GR MYV+P+SMGP+G PLSK G+E+TDSPYVV MR MTR+G K
Sbjct: 154 GRPMYVVPYSMGPIGGPLSKNGIELTDSPYVVLCMRTMTRMGTK 197
>AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical
protein W05G11.6b protein.
Length = 541
Score = 83.4 bits (197), Expect = 1e-16
Identities = 55/154 (35%), Positives = 67/154 (43%), Gaps = 6/154 (3%)
Frame = +3
Query: 249 SEVLEILRQDEQFVRCLHAVG------SGGTPGWPCDPKNTIILHKPAENEIVXXXXXXX 410
++VLE L D FVRC+H+VG WPC+P+ +I H+P E EI
Sbjct: 86 TKVLEALG-DNDFVRCIHSVGLPRPVKQKVINHWPCNPEKVMIAHRPKEREIWSFGSGYG 144
Query: 411 XXXXXXKKCFALRLGSVIARPRRMAGRTYAYPSHNQPSR*EALHRCRFSFSLRENEPCHD 590
KKCFALR+ I R P E F + +
Sbjct: 145 GNSILGKKCFALRIACNIGRDEGWLAEHMLIMGVTNPEGEEKFIAAAFPSACGKTNLAML 204
Query: 591 DANNCPGYKVDCVGDDIAWMKFDKDGVFRAINPE 692
PG+KV VGDDIAWMKF DG AINPE
Sbjct: 205 TPT-VPGWKVRVVGDDIAWMKFGADGRLYAINPE 237
Score = 83.4 bits (197), Expect = 1e-16
Identities = 36/48 (75%), Positives = 44/48 (91%)
Frame = +1
Query: 475 EGWLAEHMLIRRITNPQGKKRYIAAAFPSACGKTNLAMMTPTIAPGTK 618
EGWLAEHMLI +TNP+G++++IAAAFPSACGKTNLAM+TPT+ PG K
Sbjct: 166 EGWLAEHMLIMGVTNPEGEEKFIAAAFPSACGKTNLAMLTPTV-PGWK 212
Score = 74.5 bits (175), Expect = 6e-14
Identities = 31/44 (70%), Positives = 37/44 (84%)
Frame = +1
Query: 124 GRTMYVIPFSMGPVGSPLSKIGVEITDSPYVVYSMRVMTRIGAK 255
GR MYV+P+SMGP+G PLSK G+E+TDSPYVV MR MTR+G K
Sbjct: 44 GRPMYVVPYSMGPIGGPLSKNGIELTDSPYVVLCMRTMTRMGTK 87
>AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical
protein W05G11.6a protein.
Length = 651
Score = 83.4 bits (197), Expect = 1e-16
Identities = 55/154 (35%), Positives = 67/154 (43%), Gaps = 6/154 (3%)
Frame = +3
Query: 249 SEVLEILRQDEQFVRCLHAVG------SGGTPGWPCDPKNTIILHKPAENEIVXXXXXXX 410
++VLE L D FVRC+H+VG WPC+P+ +I H+P E EI
Sbjct: 196 TKVLEALG-DNDFVRCIHSVGLPRPVKQKVINHWPCNPEKVMIAHRPKEREIWSFGSGYG 254
Query: 411 XXXXXXKKCFALRLGSVIARPRRMAGRTYAYPSHNQPSR*EALHRCRFSFSLRENEPCHD 590
KKCFALR+ I R P E F + +
Sbjct: 255 GNSILGKKCFALRIACNIGRDEGWLAEHMLIMGVTNPEGEEKFIAAAFPSACGKTNLAML 314
Query: 591 DANNCPGYKVDCVGDDIAWMKFDKDGVFRAINPE 692
PG+KV VGDDIAWMKF DG AINPE
Sbjct: 315 TPT-VPGWKVRVVGDDIAWMKFGADGRLYAINPE 347
Score = 83.4 bits (197), Expect = 1e-16
Identities = 36/48 (75%), Positives = 44/48 (91%)
Frame = +1
Query: 475 EGWLAEHMLIRRITNPQGKKRYIAAAFPSACGKTNLAMMTPTIAPGTK 618
EGWLAEHMLI +TNP+G++++IAAAFPSACGKTNLAM+TPT+ PG K
Sbjct: 276 EGWLAEHMLIMGVTNPEGEEKFIAAAFPSACGKTNLAMLTPTV-PGWK 322
Score = 74.5 bits (175), Expect = 6e-14
Identities = 31/44 (70%), Positives = 37/44 (84%)
Frame = +1
Query: 124 GRTMYVIPFSMGPVGSPLSKIGVEITDSPYVVYSMRVMTRIGAK 255
GR MYV+P+SMGP+G PLSK G+E+TDSPYVV MR MTR+G K
Sbjct: 154 GRPMYVVPYSMGPIGGPLSKNGIELTDSPYVVLCMRTMTRMGTK 197
>AF040660-7|AAN65287.1| 366|Caenorhabditis elegans Hypothetical
protein W05G11.6c protein.
Length = 366
Score = 62.1 bits (144), Expect = 4e-10
Identities = 26/36 (72%), Positives = 34/36 (94%)
Frame = +1
Query: 511 ITNPQGKKRYIAAAFPSACGKTNLAMMTPTIAPGTK 618
+TNP+G++++IAAAFPSACGKTNLAM+TPT+ PG K
Sbjct: 3 VTNPEGEEKFIAAAFPSACGKTNLAMLTPTV-PGWK 37
Score = 48.0 bits (109), Expect = 6e-06
Identities = 21/29 (72%), Positives = 22/29 (75%)
Frame = +3
Query: 606 PGYKVDCVGDDIAWMKFDKDGVFRAINPE 692
PG+KV VGDDIAWMKF DG AINPE
Sbjct: 34 PGWKVRVVGDDIAWMKFGADGRLYAINPE 62
>AF125442-11|AAD12791.1| 624|Caenorhabditis elegans Hypothetical
protein H04M03.1 protein.
Length = 624
Score = 53.6 bits (123), Expect = 1e-07
Identities = 22/41 (53%), Positives = 31/41 (75%)
Frame = +1
Query: 124 GRTMYVIPFSMGPVGSPLSKIGVEITDSPYVVYSMRVMTRI 246
GRTMYV+PFSMG +GS + +GV+ITD P +V ++R R+
Sbjct: 179 GRTMYVVPFSMGTIGSRRAVVGVQITDDPVLVLNLRTTFRV 219
Score = 27.9 bits (59), Expect = 7.3
Identities = 33/156 (21%), Positives = 58/156 (37%), Gaps = 7/156 (4%)
Frame = +3
Query: 249 SEVLEILRQDEQFVRCLHAVGSGG-------TPGWPCDPKNTIILHKPAENEIVXXXXXX 407
S + + + F+RC+H +G TP P + ++ K + E V
Sbjct: 221 SNIWDHIAATTNFLRCVHTIGMPRPIIRKIVTPSPVETPVGSFLVLKHDDQE-VWAHGHS 279
Query: 408 XXXXXXXKKCFALRLGSVIARPRRMAGRTYAYPSHNQPSR*EALHRCRFSFSLRENEPCH 587
K F++ S + + + A + P + +H C +S SL +
Sbjct: 280 FGRTPRYGKTFSVHAASWLGAKQGWLAESAAILAITNPKN-DTIHVC-YS-SLTTIDSLQ 336
Query: 588 DDANNCPGYKVDCVGDDIAWMKFDKDGVFRAINPEN 695
PG+KV V + W+ + DG +PEN
Sbjct: 337 LSKGLAPGWKVTVVSEKSVWLHW-HDGKIYGFSPEN 371
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +1
Query: 472 REGWLAEHMLIRRITNPQGKKRYIAAAFPSACGKTNLAMMTPTIAPGTK 618
++GWLAE I ITNP+ ++ S+ + ++ +APG K
Sbjct: 301 KQGWLAESAAILAITNPKNDTIHVCY---SSLTTIDSLQLSKGLAPGWK 346
>Z81532-5|CAE17816.1| 101|Caenorhabditis elegans Hypothetical
protein F36F2.8 protein.
Length = 101
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 651 SSRLCRPPRNLLCTRGNCWRHHGKVRF 571
+S+ C PRN C GNC +H+G F
Sbjct: 51 TSQFC--PRNFKCINGNCEKHNGSSHF 75
>Z71178-8|CAA94882.1| 552|Caenorhabditis elegans Hypothetical
protein B0024.10 protein.
Length = 552
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/56 (30%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = -2
Query: 315 RSRLREDNERTARLDVEFLELRSNSSHDSHRINHVRR-IRDFYADLRERRSHRTHR 151
+++L+E+NER LDV F++L++ ++ + R+ +R+ D + RE+R R
Sbjct: 155 QAKLQEENERKKALDVNFVKLKAENA-ERDRLERLRQEAFDKDKESREKREQEQLR 209
>Z32673-1|CAA83585.1| 472|Caenorhabditis elegans transcription
factor protein.
Length = 472
Score = 27.9 bits (59), Expect = 7.3
Identities = 27/115 (23%), Positives = 43/115 (37%)
Frame = -2
Query: 489 GQPSFADERSLIPDVERSTSCPTNYCRRIHCRSLRSRSQPACGV*WCS*GRRANPECHRS 310
G PS + ++E S S C R+HC++ + S G R N H
Sbjct: 301 GAPSKKHRWLPVNELEESRSSRGKNCGRVHCKATYKCALCGKPTTLNSTGSRWNLLRHVI 360
Query: 309 RLREDNERTARLDVEFLELRSNSSHDSHRINHVRRIRDFYADLRERRSHRTHREW 145
+ D + D +F ++SN I+H R+ R D + + EW
Sbjct: 361 MIHSDCKPYKCWDCDFTGIKSNV------ISHARQCRHNAEDAHDITTDEMRAEW 409
>U41535-12|AAK67251.1| 438|Caenorhabditis elegans Abnormal cell
lineage protein 26 protein.
Length = 438
Score = 27.9 bits (59), Expect = 7.3
Identities = 27/115 (23%), Positives = 43/115 (37%)
Frame = -2
Query: 489 GQPSFADERSLIPDVERSTSCPTNYCRRIHCRSLRSRSQPACGV*WCS*GRRANPECHRS 310
G PS + ++E S S C R+HC++ + S G R N H
Sbjct: 267 GAPSKKHRWLPVNELEESRSSRGKNCGRVHCKATYKCALCGKPTTLNSTGSRWNLLRHVI 326
Query: 309 RLREDNERTARLDVEFLELRSNSSHDSHRINHVRRIRDFYADLRERRSHRTHREW 145
+ D + D +F ++SN I+H R+ R D + + EW
Sbjct: 327 MIHSDCKPYKCWDCDFTGIKSNV------ISHARQCRHNAEDAHDITTDEMRAEW 375
>AJ130957-1|CAA10262.1| 438|Caenorhabditis elegans LIN-26B protein.
Length = 438
Score = 27.9 bits (59), Expect = 7.3
Identities = 27/115 (23%), Positives = 43/115 (37%)
Frame = -2
Query: 489 GQPSFADERSLIPDVERSTSCPTNYCRRIHCRSLRSRSQPACGV*WCS*GRRANPECHRS 310
G PS + ++E S S C R+HC++ + S G R N H
Sbjct: 267 GAPSKKHRWLPVNELEESRSSRGKNCGRVHCKATYKCALCGKPTTLNSTGSRWNLLRHVI 326
Query: 309 RLREDNERTARLDVEFLELRSNSSHDSHRINHVRRIRDFYADLRERRSHRTHREW 145
+ D + D +F ++SN I+H R+ R D + + EW
Sbjct: 327 MIHSDCKPYKCWDCDFTGIKSNV------ISHARQCRHNAEDAHDITTDEMRAEW 375
>AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical
protein Y119D3B.12a protein.
Length = 339
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -2
Query: 240 SHDSHRINHVRRIRDFYADLRERRSHRTHR 151
SH S R + R RD + RE R H+ HR
Sbjct: 284 SHRSSRDHRDHRHRDHRGEHREHREHKEHR 313
>U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 27.5 bits (58), Expect = 9.7
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = -1
Query: 694 FSGLMARNTPSLSNFIQAMSSPTQSTLYPGQLLASSWQGSFSRKLKEKRQ 545
FS L T S + + SPT S P +ASS S S + E RQ
Sbjct: 204 FSALSLLGTDSPTTHSVSTPSPTDSVCSPSSSVASSATPSTSSPVDESRQ 253
>U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 27.5 bits (58), Expect = 9.7
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = -1
Query: 694 FSGLMARNTPSLSNFIQAMSSPTQSTLYPGQLLASSWQGSFSRKLKEKRQ 545
FS L T S + + SPT S P +ASS S S + E RQ
Sbjct: 204 FSALSLLGTDSPTTHSVSTPSPTDSVCSPSSSVASSATPSTSSPVDESRQ 253
>AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell
lineage protein 1 protein.
Length = 441
Score = 27.5 bits (58), Expect = 9.7
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = -1
Query: 694 FSGLMARNTPSLSNFIQAMSSPTQSTLYPGQLLASSWQGSFSRKLKEKRQ 545
FS L T S + + SPT S P +ASS S S + E RQ
Sbjct: 204 FSALSLLGTDSPTTHSVSTPSPTDSVCSPSSSVASSATPSTSSPVDESRQ 253
>AC084159-10|AAK39362.1| 310|Caenorhabditis elegans Hypothetical
protein Y73B3A.5 protein.
Length = 310
Score = 27.5 bits (58), Expect = 9.7
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = -1
Query: 694 FSGLMARNTPSLSNFIQAMSSPTQSTLYPGQLLASSWQGSFSRKLKEKRQ 545
FS L T S + + SPT S P +ASS S S + E RQ
Sbjct: 109 FSALSLLGTDSPTTHSVSTPSPTDSVCSPSSSVASSATPSTSSPVDESRQ 158
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,648,203
Number of Sequences: 27780
Number of extensions: 328856
Number of successful extensions: 1085
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1064
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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