Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0486.Seq
(670 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067948-3|AAO25984.1| 870|Caenorhabditis elegans Egl-27 relate... 29 3.9
AF067948-2|AAD34654.1| 870|Caenorhabditis elegans Egl-27 relate... 29 3.9
AF067948-1|AAD34653.1| 1022|Caenorhabditis elegans Egl-27 relate... 29 3.9
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 28 5.2
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 28 5.2
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 28 5.2
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z71266-3|CAA95840.1| 292|Caenorhabditis elegans Hypothetical pr... 28 6.9
DQ340625-1|ABC65813.1| 292|Caenorhabditis elegans chondroitin p... 28 6.9
Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical pr... 27 9.1
>AF067948-3|AAO25984.1| 870|Caenorhabditis elegans Egl-27 related
protein 1, isoform d protein.
Length = 870
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = -1
Query: 418 EQMGEMEIAATAKKAGQLQPQQRQLAAVRP*QLPAVVRQPRRQAVLSTEPSLIF 257
EQ +++ K Q+Q Q +Q + P VV PR++ +T+P+++F
Sbjct: 712 EQFLQLQKNFAQKIQAQIQQQIQQQQQRQAQTTPQVVATPRKKTTPATKPAIVF 765
>AF067948-2|AAD34654.1| 870|Caenorhabditis elegans Egl-27 related
protein 1, isoform b protein.
Length = 870
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = -1
Query: 418 EQMGEMEIAATAKKAGQLQPQQRQLAAVRP*QLPAVVRQPRRQAVLSTEPSLIF 257
EQ +++ K Q+Q Q +Q + P VV PR++ +T+P+++F
Sbjct: 712 EQFLQLQKNFAQKIQAQIQQQIQQQQQRQAQTTPQVVATPRKKTTPATKPAIVF 765
>AF067948-1|AAD34653.1| 1022|Caenorhabditis elegans Egl-27 related
protein 1, isoform a protein.
Length = 1022
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = -1
Query: 418 EQMGEMEIAATAKKAGQLQPQQRQLAAVRP*QLPAVVRQPRRQAVLSTEPSLIF 257
EQ +++ K Q+Q Q +Q + P VV PR++ +T+P+++F
Sbjct: 712 EQFLQLQKNFAQKIQAQIQQQIQQQQQRQAQTTPQVVATPRKKTTPATKPAIVF 765
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Frame = +3
Query: 291 CRRGCRTTAGSCYGRTAASCR--CCGC 365
CRR C C R CR CCGC
Sbjct: 97 CRRCCTCCRTCCCTRCCTCCRPCCCGC 123
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Frame = +3
Query: 291 CRRGCRTTAGSCYGRTAASCR--CCGC 365
CRR C C R CR CCGC
Sbjct: 95 CRRCCTCCRTCCCTRCCTCCRPCCCGC 121
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Frame = +3
Query: 291 CRRGCRTTAGSCYGRTAASCR--CCGC 365
CRR C C R CR CCGC
Sbjct: 96 CRRCCTCCRTCCCTRCCTCCRPCCCGC 122
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Frame = +3
Query: 291 CRRGCRTTAGSCYGRTAASCR--CCGC 365
CRR C C R CR CCGC
Sbjct: 96 CRRCCTCCRTCCCTRCCTCCRPCCCGC 122
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Frame = +3
Query: 291 CRRGCRTTAGSCYGRTAASCR--CCGC 365
CRR C C R CR CCGC
Sbjct: 97 CRRCCTCCRTCCCTRCCTCCRPCCCGC 123
>Z71266-3|CAA95840.1| 292|Caenorhabditis elegans Hypothetical
protein R06C7.4 protein.
Length = 292
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/61 (24%), Positives = 22/61 (36%), Gaps = 2/61 (3%)
Frame = +3
Query: 276 VLSTACRRGCRTTAGSCYGRTAASCRCCGC--SWPAFLAVAAISISPICSTFSLVTSVIS 449
V S C +G C G A +C C C WP A + C++ + +
Sbjct: 189 VSSAVCYGDSGCGSGKCIGALAGTCNCNSCVFGWPCQEDSACGGFNGACNSITATCDCFA 248
Query: 450 A 452
A
Sbjct: 249 A 249
>DQ340625-1|ABC65813.1| 292|Caenorhabditis elegans chondroitin
proteoglycan-3 protein.
Length = 292
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/61 (24%), Positives = 22/61 (36%), Gaps = 2/61 (3%)
Frame = +3
Query: 276 VLSTACRRGCRTTAGSCYGRTAASCRCCGC--SWPAFLAVAAISISPICSTFSLVTSVIS 449
V S C +G C G A +C C C WP A + C++ + +
Sbjct: 189 VSSAVCYGDSGCGSGKCIGALAGTCNCNSCVFGWPCQEDSACGGFNGACNSITATCDCFA 248
Query: 450 A 452
A
Sbjct: 249 A 249
>Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical
protein F01G10.5 protein.
Length = 824
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = +2
Query: 53 TELKQKHG*LTLQVYTVQMALFNQI*KHREKLNDIVLNLN*ICSCNIDVYNLMK 214
+EL +K LT+QV +Q A N++ R+K +++ L + N+D+ L+K
Sbjct: 324 SELNEK---LTMQVKDLQDASENELASFRQKEKELIDELRMATNENVDLEELLK 374
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,829,557
Number of Sequences: 27780
Number of extensions: 179633
Number of successful extensions: 547
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 547
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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