Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0484.Seq
(794 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 164 3e-39
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 152 1e-35
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 151 2e-35
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 132 1e-29
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 131 2e-29
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 118 2e-25
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 110 3e-23
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 107 3e-22
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 101 2e-20
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 96 1e-18
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 91 4e-17
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 89 9e-17
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 84 3e-15
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 84 4e-15
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 82 2e-14
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 81 2e-14
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 79 1e-13
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 79 1e-13
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 79 2e-13
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 77 5e-13
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 77 5e-13
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 76 9e-13
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 75 2e-12
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 74 5e-12
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 73 1e-11
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 73 1e-11
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 71 4e-11
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 69 2e-10
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 68 2e-10
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 67 4e-10
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 66 7e-10
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 66 1e-09
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 64 4e-09
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 63 7e-09
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 63 7e-09
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 58 3e-07
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 57 4e-07
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 57 4e-07
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 55 2e-06
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 55 2e-06
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 53 1e-05
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 52 2e-05
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 51 3e-05
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 50 5e-05
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 50 9e-05
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 49 2e-04
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 49 2e-04
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 48 2e-04
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 48 3e-04
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 48 4e-04
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 47 5e-04
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 46 0.001
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 46 0.001
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 46 0.001
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 45 0.002
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 44 0.003
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 44 0.006
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 44 0.006
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 43 0.008
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 43 0.010
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 41 0.031
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 41 0.031
UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2; Mycoplas... 40 0.072
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 39 0.17
UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3; ... 38 0.22
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 38 0.38
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 38 0.38
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.38
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.51
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 37 0.51
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 37 0.67
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 37 0.67
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 37 0.67
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 36 1.2
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 36 1.5
UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3; Bacteria... 36 1.5
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 35 2.0
UniRef50_Q1JY07 Cluster: Tryptophan synthase alpha chain; n=5; P... 35 2.7
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 35 2.7
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 2.7
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 34 3.6
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 34 4.7
UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2; Ostreoco... 33 8.3
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 8.3
UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1; Neoricke... 33 8.3
UniRef50_Q9NQ11 Cluster: Probable cation-transporting ATPase 13A... 33 8.3
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 164 bits (398), Expect = 3e-39
Identities = 81/96 (84%), Positives = 85/96 (88%)
Frame = +3
Query: 222 KNRQTREHLLVSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 401
K + E L SLPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 402 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY 509
NGH+GLGVKCSKEVATAIRGAIILAKLS++PVRRGY
Sbjct: 134 NGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGY 169
Score = 124 bits (298), Expect = 3e-27
Identities = 57/81 (70%), Positives = 63/81 (77%)
Frame = +2
Query: 509 WGNKIGKPHTVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSALVQ 688
WGNKIGKPHTVPCKVTG+CGSV RLIPAPRGTGIVSAPVPKKLL MAG+ DCYTSA
Sbjct: 170 WGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGC 229
Query: 689 IGNFGKFAKSHIRCHLPRTYA 751
G FAK+ + +TY+
Sbjct: 230 TATLGNFAKATFDA-ISKTYS 249
Score = 50.0 bits (114), Expect = 7e-05
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +1
Query: 163 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFLYQSKNS 276
K + KEW+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 152 bits (368), Expect = 1e-35
Identities = 71/106 (66%), Positives = 89/106 (83%), Gaps = 1/106 (0%)
Frame = +3
Query: 222 KNRQTREHLLVSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 401
K + E L SLPIKE++I+D+FL P LNDEV+K++PVQKQTRAGQRTRFKAFV IGD+
Sbjct: 48 KIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDS 106
Query: 402 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY-GVTR*ESHT 536
+GH+GLG+KC+KEVATAIRGAII+ KLS++P+RRGY G + HT
Sbjct: 107 DGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTALGDPHT 152
Score = 100 bits (240), Expect = 4e-20
Identities = 41/70 (58%), Positives = 52/70 (74%)
Frame = +2
Query: 509 WGNKIGKPHTVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSALVQ 688
WG +G PHTVP KV+GKCGSVT RL+PAPRG G+V+APV K+ LQ+AG++DCYT +
Sbjct: 143 WGTALGDPHTVPVKVSGKCGSVTVRLVPAPRGAGLVAAPVTKRFLQLAGIEDCYTQSRGS 202
Query: 689 IGNFGKFAKS 718
G F K+
Sbjct: 203 TKTLGNFVKA 212
Score = 51.2 bits (117), Expect = 3e-05
Identities = 20/31 (64%), Positives = 27/31 (87%)
Frame = +1
Query: 163 KEDQKEWVPVTKLGRLVREGKIDKLESIYLF 255
++++KEWVPVTKLGRLV+ GKI +E IYL+
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLY 58
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 151 bits (366), Expect = 2e-35
Identities = 76/96 (79%), Positives = 80/96 (83%)
Frame = +3
Query: 222 KNRQTREHLLVSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 401
K + E L SLPIKE EIIDFFLG SL DEVLKIMPVQKQT AGQ TRFKAFV IGD
Sbjct: 14 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDY 73
Query: 402 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY 509
NGH+GL VKCSKEVATAIRGAIILAKLS++PV RGY
Sbjct: 74 NGHVGLSVKCSKEVATAIRGAIILAKLSIVPVCRGY 109
Score = 62.9 bits (146), Expect = 9e-09
Identities = 25/30 (83%), Positives = 26/30 (86%)
Frame = +2
Query: 509 WGNKIGKPHTVPCKVTGKCGSVTFRLIPAP 598
WGNKIGKPHTVPCKVTG+C SV LIPAP
Sbjct: 110 WGNKIGKPHTVPCKVTGRCSSVLVHLIPAP 139
Score = 35.9 bits (79), Expect = 1.2
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +1
Query: 184 VPVTKLGRLVREGKIDKLESIYLFLYQSKNS 276
+PVTKLG L+ + KI LE IYLF K S
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKES 31
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 132 bits (318), Expect = 1e-29
Identities = 66/101 (65%), Positives = 80/101 (79%), Gaps = 2/101 (1%)
Frame = +3
Query: 240 EHL-LVSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 416
EH+ L SLPIKE +I++ F+G L DEV+KI PVQKQT AGQR RFKAFV +GD NGHIG
Sbjct: 69 EHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGHIG 128
Query: 417 LGVKCSKEVATAIRGAIILAKLSVLPVRRGY-GVTR*ESHT 536
LGVK KEVA +I+G++ILAKL+++PVRRGY G E HT
Sbjct: 129 LGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKLGEPHT 169
Score = 85.4 bits (202), Expect = 1e-15
Identities = 38/70 (54%), Positives = 48/70 (68%)
Frame = +2
Query: 509 WGNKIGKPHTVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSALVQ 688
WG+K+G+PHT+P KV GKCGSV RLIPAPRG GIV++ KK+L MAG+ D YT +
Sbjct: 160 WGSKLGEPHTIPTKVHGKCGSVHVRLIPAPRGAGIVASGTVKKVLAMAGLHDVYTCSRGH 219
Query: 689 IGNFGKFAKS 718
G K+
Sbjct: 220 TRTLGNSVKA 229
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +1
Query: 166 EDQKEWVPVTKLGRLVREGKIDKLESIYLF 255
+D+ WVP TKLGRLV++GKI LE I+LF
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLF 74
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 131 bits (317), Expect = 2e-29
Identities = 63/90 (70%), Positives = 74/90 (82%)
Frame = +3
Query: 240 EHLLVSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 419
E L SLP+KEF+IID L P L DEV+ I PVQKQTRAGQRTRFKA V +GD+NGH+GL
Sbjct: 55 EIFLHSLPVKEFQIIDTLL-PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGL 113
Query: 420 GVKCSKEVATAIRGAIILAKLSVLPVRRGY 509
G+K +KEVA AIR II+AKLSV+P+RRGY
Sbjct: 114 GIKTAKEVAGAIRAGIIIAKLSVIPIRRGY 143
Score = 89.4 bits (212), Expect = 9e-17
Identities = 37/57 (64%), Positives = 47/57 (82%)
Frame = +2
Query: 509 WGNKIGKPHTVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSA 679
WG +G+PH++ K TGKCGSVT RLIPAPRG+GIV++P KKLLQ+AGV+D YT +
Sbjct: 144 WGTNLGQPHSLATKTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQLAGVEDVYTQS 200
Score = 43.6 bits (98), Expect = 0.006
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +1
Query: 169 DQKEWVPVTKLGRLVREGKIDKLESIYL 252
++K WVPVTKLGRLV+ GKI +E I+L
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFL 58
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 118 bits (284), Expect = 2e-25
Identities = 57/66 (86%), Positives = 61/66 (92%)
Frame = +3
Query: 312 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 491
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 492 PVRRGY 509
P+R+GY
Sbjct: 108 PLRQGY 113
Score = 115 bits (277), Expect = 1e-24
Identities = 52/70 (74%), Positives = 57/70 (81%)
Frame = +2
Query: 509 WGNKIGKPHTVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSALVQ 688
WGNKIGKP+TVPCKVTG CGSV LIPAPRGTG+VSAPVPKKLL MAG+ DCYTSA
Sbjct: 114 WGNKIGKPNTVPCKVTGHCGSVLVCLIPAPRGTGMVSAPVPKKLLMMAGIDDCYTSARDC 173
Query: 689 IGNFGKFAKS 718
+ G FAK+
Sbjct: 174 TASLGNFAKA 183
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 110 bits (265), Expect = 3e-23
Identities = 52/91 (57%), Positives = 63/91 (69%)
Frame = +2
Query: 497 PKRLWGNKIGKPHTVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTS 676
P+ WGN+I KPHTVP KVTG+CGSV RLIPAPRGTG VSAPVPKKLL MAG+ DCYTS
Sbjct: 106 PRGYWGNEIRKPHTVPGKVTGRCGSVLVRLIPAPRGTGFVSAPVPKKLLMMAGIDDCYTS 165
Query: 677 ALVQIGNFGKFAKSHIRCHLPRTYALPSILT 769
A +G + + PR A+ +++
Sbjct: 166 ARGHTATWGTLPRL-LLMRSPRPTAISPLIS 195
Score = 85.4 bits (202), Expect = 1e-15
Identities = 39/49 (79%), Positives = 44/49 (89%)
Frame = +3
Query: 363 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY 509
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGY
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGY 109
Score = 33.5 bits (73), Expect = 6.2
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +1
Query: 169 DQKEWVPVTKLGRLVREGKI 228
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 107 bits (257), Expect = 3e-22
Identities = 53/66 (80%), Positives = 55/66 (83%)
Frame = +3
Query: 222 KNRQTREHLLVSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 401
K + E L SLPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 49 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 108
Query: 402 NGHIGL 419
NGH+GL
Sbjct: 109 NGHVGL 114
Score = 50.8 bits (116), Expect = 4e-05
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +1
Query: 163 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFLYQSKNS 276
K + KEW+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 66
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 101 bits (243), Expect = 2e-20
Identities = 48/81 (59%), Positives = 59/81 (72%)
Frame = +3
Query: 264 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 443
I+E EI+D G S+ +EVL I VQKQTRAGQ+TR KA V +GD GH+G+G K SKE
Sbjct: 49 IREPEIVDLLCGNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEA 108
Query: 444 ATAIRGAIILAKLSVLPVRRG 506
A+AIRGAI AK ++ PVR G
Sbjct: 109 ASAIRGAIARAKCAIRPVRLG 129
Score = 82.2 bits (194), Expect = 1e-14
Identities = 36/73 (49%), Positives = 48/73 (65%)
Frame = +2
Query: 506 LWGNKIGKPHTVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSALV 685
LW GKPHTV CK +GKCG+ ++IPAPRGTGI+S V KK+ ++AG++D YT +
Sbjct: 130 LWDGAQGKPHTVSCKGSGKCGTSVVQVIPAPRGTGIISGSVNKKIFELAGIKDLYTLSFG 189
Query: 686 QIGNFGKFAKSHI 724
FAK+ I
Sbjct: 190 ATSTTENFAKASI 202
Score = 35.9 bits (79), Expect = 1.2
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +1
Query: 163 KEDQKEWVPVTKLGRLVREGKIDKLESIYLF 255
++++ EW+P T +GRLV+ KI LE I+ F
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKF 45
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 95.9 bits (228), Expect = 1e-18
Identities = 48/65 (73%), Positives = 52/65 (80%)
Frame = +3
Query: 222 KNRQTREHLLVSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 401
K + E L SLPIKE EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 402 NGHIG 416
NG+ G
Sbjct: 62 NGYAG 66
Score = 46.4 bits (105), Expect = 8e-04
Identities = 22/65 (33%), Positives = 37/65 (56%)
Frame = +1
Query: 490 YQSEEVMG*QDRKATHRPLQGHRQVWFRNIPADSCPSWYWYCVCASS*EASSDGWCTGLL 669
++++ ++G QDR+A HRPLQG R + +W+ + + + EA+ D W LL
Sbjct: 91 HRAQRLLGEQDRQAPHRPLQGDRPLRLCAGALHPRAQGHWHRLSSCAQEAAHDSWYLRLL 150
Query: 670 HVSSG 684
H+S G
Sbjct: 151 HLSQG 155
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 90.6 bits (215), Expect = 4e-17
Identities = 44/68 (64%), Positives = 50/68 (73%)
Frame = +2
Query: 548 KVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSALVQIGNFGKFAKSHIR 727
KVTG+CGSV RLIPAPRGTGIVSAPVPKKLL MAG+ DCYTSA G FAK+
Sbjct: 125 KVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFD 184
Query: 728 CHLPRTYA 751
+ +TY+
Sbjct: 185 A-ISKTYS 191
Score = 81.4 bits (192), Expect = 2e-14
Identities = 41/52 (78%), Positives = 42/52 (80%)
Frame = +3
Query: 222 KNRQTREHLLVSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 377
K + E L SLPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFK
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
Score = 50.8 bits (116), Expect = 4e-05
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +1
Query: 163 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFLYQSKNS 276
K + KEW+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 89.4 bits (212), Expect = 9e-17
Identities = 44/69 (63%), Positives = 48/69 (69%)
Frame = +2
Query: 512 GNKIGKPHTVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSALVQI 691
GNKIGK H V CKVTG CGSV LIPA RGTGI SAPVP K L MAG+ DCYTSA
Sbjct: 7 GNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGTGISSAPVPTKPLMMAGIDDCYTSARGCT 66
Query: 692 GNFGKFAKS 718
+ FA++
Sbjct: 67 ASLDYFAQA 75
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 84.2 bits (199), Expect = 3e-15
Identities = 41/91 (45%), Positives = 61/91 (67%)
Frame = +3
Query: 240 EHLLVSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 419
E L LPI+E EI+D L P L+D+VL + +Q+ T +G+R RF +G+++G++GL
Sbjct: 12 EALATGLPIREVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGL 70
Query: 420 GVKCSKEVATAIRGAIILAKLSVLPVRRGYG 512
+ KEVA+ IR AI AKL+++PV RG G
Sbjct: 71 AICKGKEVASTIRKAIDKAKLNMIPVMRGNG 101
Score = 48.0 bits (109), Expect = 3e-04
Identities = 22/60 (36%), Positives = 36/60 (60%)
Frame = +2
Query: 509 WGNKIGKPHTVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSALVQ 688
W + G +VP K+TG+ GS L+PAP G G+V + +++L +AGV D ++ + Q
Sbjct: 103 WESGGGPGTSVPLKITGRSGSTRVTLMPAPAGKGLVVSDYGRRVLTLAGVTDVWSRSAGQ 162
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 83.8 bits (198), Expect = 4e-15
Identities = 41/68 (60%), Positives = 54/68 (79%)
Frame = +3
Query: 255 SLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCS 434
S+PIKE++I+D FL +L +E L I PVQKQT AGQ+TRFKA+V +GD++ HIGLG K +
Sbjct: 89 SIPIKEYQIVDHFL-KTLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSA 147
Query: 435 KEVATAIR 458
KEV AI+
Sbjct: 148 KEVQGAIQ 155
Score = 60.9 bits (141), Expect = 4e-08
Identities = 51/174 (29%), Positives = 80/174 (45%), Gaps = 7/174 (4%)
Frame = +1
Query: 172 QKEWVPVTKLGRLVREGKIDKLESIYLFLYQSKN----SRSLISSSARP*MMRFLRSCLY 339
++EWVP+TKLGRLV+ GKI LE+I+ F K L + P + ++
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQIVDHFLKTLKEEPLAIGPVQKQTC 120
Query: 340 RNKHVPDSAHVSRHLLPLATTTVILVWV*SAARKSPLPFEALLSLLSC--QFYQSEE-VM 510
+ A+V ++ + + L W +A++ + L +L C QF S++ ++
Sbjct: 121 AGQKTRFKAYV---VVGDSHQHIGLGW--KSAKEVQGAIQELCNLNQCQTQFDSSQKRIL 175
Query: 511 G*QDRKATHRPLQGHRQVWFRNIPADSCPSWYWYCVCASS*EASSDGWCTGLLH 672
G QDR TH P+Q R+ S YWY E ++GW LLH
Sbjct: 176 GKQDRLTTHSPMQSDRKGRISQSQIGSSTQRYWYSCSHHIQEGLTNGWYPRLLH 229
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 81.8 bits (193), Expect = 2e-14
Identities = 50/90 (55%), Positives = 58/90 (64%)
Frame = +3
Query: 240 EHLLVSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 419
E L SLPIKE EIID FLG +L DEVLK +P QK TR GQ +KA GD NGH+
Sbjct: 68 EIYLFSLPIKETEIIDIFLGAALKDEVLKSLPEQKGTRVGQ--YYKA----GDYNGHVIT 121
Query: 420 GVKCSKEVATAIRGAIILAKLSVLPVRRGY 509
G+ EVA I+ IIL KL ++PV RGY
Sbjct: 122 GL---DEVANTIQRVIILTKLPIVPVWRGY 148
Score = 81.4 bits (192), Expect = 2e-14
Identities = 39/56 (69%), Positives = 44/56 (78%)
Frame = +2
Query: 512 GNKIGKPHTVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSA 679
G+K KPHTV CKVTG GSV+ LIPAPR T I SAP+PKKLL MAG+ DC+TSA
Sbjct: 150 GSKTSKPHTVLCKVTGH-GSVSLHLIPAPRDTVISSAPMPKKLLMMAGINDCHTSA 204
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 81.4 bits (192), Expect = 2e-14
Identities = 45/109 (41%), Positives = 62/109 (56%)
Frame = +3
Query: 162 QGRPERVGSCHQTRPSCSRRKNRQTREHLLVSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 341
QG + P K + + +L SLPIKEFE+ DF LG L D+VLK+M VQ
Sbjct: 116 QGLAPELSKAASESPQVKDMKMKSLKVYLF-SLPIKEFEVTDFLLGVPLKDKVLKLMFVQ 174
Query: 342 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 488
KQ +AG+R RFK V I D N ++ LGV+ KE+ A+ +L+ + V
Sbjct: 175 KQPKAGRRIRFKVIVTIRDCNDNVSLGVEWPKELLIAVCRTNVLSIILV 223
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 79.4 bits (187), Expect = 1e-13
Identities = 39/67 (58%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
Frame = +2
Query: 512 GNKIGKPHTVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSA--LV 685
G K +PH VPC+VTG+CGS+ LIPAPRGTG VSAPVP KLL MAG+ D +++
Sbjct: 147 GGKRLEPHMVPCRVTGRCGSLLVHLIPAPRGTGTVSAPVP-KLLMMAGIDDSSSASGCTA 205
Query: 686 QIGNFGK 706
+GNF K
Sbjct: 206 TLGNFTK 212
Score = 60.1 bits (139), Expect = 6e-08
Identities = 44/99 (44%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Frame = +3
Query: 246 LLVSLPIKEFEIIDFFLGPSLNDEVLKIM---PVQKQTRAGQRTRFKAFVAIGDNNGHIG 416
L+ + IK E I FF S N L P+ KQT Q+TRFKA V +G + GH+
Sbjct: 63 LVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEHPLIKQTCTDQQTRFKASVTVG-SYGHVS 121
Query: 417 LGVKCSKEVATAIRGAIILAKLSVLPVRRGYGVTR*ESH 533
LG+K S EVA IILAKLS++PV G R E H
Sbjct: 122 LGIKYSMEVA------IILAKLSIIPVETATGGKRLEPH 154
Score = 48.0 bits (109), Expect = 3e-04
Identities = 23/45 (51%), Positives = 29/45 (64%)
Frame = +1
Query: 172 QKEWVPVTKLGRLVREGKIDKLESIYLFLYQSKNSRSLISSSARP 306
+ +W+P+TKLG LV+E KI LE IY F S+N RSL S P
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEHP 95
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 79.4 bits (187), Expect = 1e-13
Identities = 40/86 (46%), Positives = 60/86 (69%)
Frame = -1
Query: 512 PITSSDW*N*QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLYR 333
P+TSSDW N QL D++ S+G+ +FL+ L+TQT++TV V N + LE+ +L+ + L L R
Sbjct: 113 PVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTDVTVGVTNDDDSLESGSLTSSGLLLDR 172
Query: 332 HDLKNLIIQGRAEEEINDLEFFDW*R 255
D+ N I+Q ++ +NDLEF DW R
Sbjct: 173 LDVHNFILQ-VWQQLVNDLEFLDWQR 197
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 78.6 bits (185), Expect = 2e-13
Identities = 40/85 (47%), Positives = 59/85 (69%)
Frame = +3
Query: 258 LPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSK 437
LP+ E EI+D L P L ++VL + VQ+ ++G+R R++A V +G+ NG++G+G+ SK
Sbjct: 42 LPLLEPEIVDALL-PDLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSK 100
Query: 438 EVATAIRGAIILAKLSVLPVRRGYG 512
EV AIR AI AKLS++ VR G G
Sbjct: 101 EVGPAIRKAIAHAKLSLIKVRVGCG 125
Score = 62.1 bits (144), Expect = 2e-08
Identities = 28/70 (40%), Positives = 39/70 (55%)
Frame = +2
Query: 509 WGNKIGKPHTVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSALVQ 688
W G PH++P G CGSV L+PAPRG G+V+ V K +L +AGV+D +T
Sbjct: 127 WECGCGSPHSIPFTAKGACGSVKVELLPAPRGVGLVAGNVAKAVLGLAGVKDAWTKTFGD 186
Query: 689 IGNFGKFAKS 718
FA++
Sbjct: 187 TRTTYNFAEA 196
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 77.0 bits (181), Expect = 5e-13
Identities = 38/83 (45%), Positives = 57/83 (68%)
Frame = -1
Query: 512 PITSSDW*N*QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLYR 333
P+ S+ N QL +D+S ++G G FLAAL QT++ V V +G++ LE L+GT L L
Sbjct: 32 PVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGLEARTLTGTGLLLDG 91
Query: 332 HDLKNLIIQGRAEEEINDLEFFD 264
HDL++ ++Q A+EEI+DLE F+
Sbjct: 92 HDLQHFVLQRAAQEEIDDLELFN 114
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 77.0 bits (181), Expect = 5e-13
Identities = 36/91 (39%), Positives = 59/91 (64%)
Frame = +3
Query: 240 EHLLVSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 419
E L LP+KE++I+D+ + P L DEV+ I Q+ T +G+R + +G+ NG++G+
Sbjct: 25 EALHSKLPLKEYQIVDYLI-PDLKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGV 83
Query: 420 GVKCSKEVATAIRGAIILAKLSVLPVRRGYG 512
G +KE A AI+ AI AKL+++ ++RG G
Sbjct: 84 GRGKAKEAAPAIKKAIDNAKLNIIEIKRGCG 114
Score = 58.0 bits (134), Expect = 3e-07
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = +2
Query: 509 WGNKIGKPHTVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 670
W GKPHT+P V GK GSV+ L PAP+G G+ V K +L+MAG+ D +
Sbjct: 116 WECGCGKPHTLPFLVNGKSGSVSVTLKPAPQGVGLAVGDVVKVILRMAGIDDAW 169
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 76.2 bits (179), Expect = 9e-13
Identities = 38/57 (66%), Positives = 41/57 (71%)
Frame = +2
Query: 548 KVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSALVQIGNFGKFAKS 718
KVTG+CGSV RL APRGTGIVSAPVPKKLL MA + DCYT A G FAK+
Sbjct: 125 KVTGRCGSVLVRLFSAPRGTGIVSAPVPKKLLMMA-IDDCYTLARGCTATLGNFAKA 180
Score = 71.3 bits (167), Expect = 3e-11
Identities = 37/52 (71%), Positives = 39/52 (75%)
Frame = +3
Query: 222 KNRQTREHLLVSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 377
K + E L SLPIK EIIDFFLG SL +EVLK MPVQKQTRAGQ TRFK
Sbjct: 74 KIKSLEEIYLFSLPIKGSEIIDFFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
Score = 46.8 bits (106), Expect = 6e-04
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = +1
Query: 163 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFLYQSKNS 276
K + KEW+P TKLG LV++ KI LE IYLF K S
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGS 91
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 75.4 bits (177), Expect = 2e-12
Identities = 39/86 (45%), Positives = 59/86 (68%)
Frame = +3
Query: 255 SLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCS 434
+LPI E EI+D L P L EV+ I VQKQT AG+ +R+K V +G+ +G++ +G +
Sbjct: 38 NLPITEPEIVDVLL-PKLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKA 96
Query: 435 KEVATAIRGAIILAKLSVLPVRRGYG 512
K++ AI+ AI AK++++PVRRG G
Sbjct: 97 KQLRVAIQKAIRDAKMNIIPVRRGCG 122
Score = 62.1 bits (144), Expect = 2e-08
Identities = 27/56 (48%), Positives = 38/56 (67%)
Frame = +2
Query: 509 WGNKIGKPHTVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTS 676
W G+PH++P KV GK GSV L+PAP+GTG+V V K LL AG++D +++
Sbjct: 124 WQCTCGEPHSLPFKVVGKAGSVEVDLLPAPKGTGLVVGSVLKTLLTYAGIKDAWST 179
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 73.7 bits (173), Expect = 5e-12
Identities = 38/85 (44%), Positives = 56/85 (65%)
Frame = +3
Query: 258 LPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSK 437
LP+KE EI+D L P L DEVL I VQ+ T +G+R +F+ VA+G+ +G++G
Sbjct: 84 LPLKEAEIVDQLL-PGLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLGYAQARDD 142
Query: 438 EVATAIRGAIILAKLSVLPVRRGYG 512
+V AI+ AI +AKL+++ V RG G
Sbjct: 143 QVGGAIQKAIDVAKLNIIEVDRGSG 167
Score = 52.0 bits (119), Expect = 2e-05
Identities = 21/57 (36%), Positives = 38/57 (66%)
Frame = +2
Query: 509 WGNKIGKPHTVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSA 679
W ++ G +++ K GK GSVT + PAP+G G+ +A + +L++AGV+D +T++
Sbjct: 169 WEDQPGGTNSLTRKAEGKAGSVTVEIQPAPQGLGLAAAETVRNILELAGVEDAWTNS 225
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 72.5 bits (170), Expect = 1e-11
Identities = 38/66 (57%), Positives = 48/66 (72%)
Frame = +3
Query: 258 LPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSK 437
LP+KEFEI DFFL SL D+VLKI+P+ + R Q TRF +F I + GH G+GVKCSK
Sbjct: 18 LPVKEFEINDFFLEASLKDKVLKIIPLSR-FRNDQWTRFNSFDTI-NYGGHNGIGVKCSK 75
Query: 438 EVATAI 455
+V TA+
Sbjct: 76 KVGTAV 81
Score = 50.4 bits (115), Expect = 5e-05
Identities = 35/94 (37%), Positives = 48/94 (51%)
Frame = +2
Query: 482 VSSTSPKRLWGNKIGKPHTVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQ 661
+SS P+ GN I KP T PCK TG S++F L P IVS VP+KL+ A +
Sbjct: 90 LSSCLPRDYCGNNIRKP-TYPCKRTG--WSISF-LFPETLAF-IVSVLVPRKLMLRASID 144
Query: 662 DCYTSALVQIGNFGKFAKSHIRCHLPRTYALPSI 763
CYTSA G AK+ +++ P++
Sbjct: 145 SCYTSARSYTVTLGNIAKATFDAVSKTSHSTPNL 178
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 72.5 bits (170), Expect = 1e-11
Identities = 39/92 (42%), Positives = 58/92 (63%)
Frame = +3
Query: 237 REHLLVSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 416
+E L LP+KE E++D + P L DEVL I VQ+ T +G+R +F+ VA+G+ +G IG
Sbjct: 26 QEALNSGLPLKESEVVDQLV-PDLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIG 84
Query: 417 LGVKCSKEVATAIRGAIILAKLSVLPVRRGYG 512
+V AI+ AI +AKL+++ V RG G
Sbjct: 85 YAEGRDDQVGGAIQKAIDIAKLNIIDVSRGCG 116
Score = 59.3 bits (137), Expect = 1e-07
Identities = 27/70 (38%), Positives = 39/70 (55%)
Frame = +2
Query: 509 WGNKIGKPHTVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSALVQ 688
W G+PHTV + GK GSV L PAPRG G+ +K+L++AG++D +T +
Sbjct: 118 WECGCGRPHTVALRTEGKAGSVEVELQPAPRGLGLAGGETVRKVLELAGIEDIWTRSSGN 177
Query: 689 IGNFGKFAKS 718
FAK+
Sbjct: 178 TRTTVNFAKA 187
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 70.5 bits (165), Expect = 4e-11
Identities = 39/87 (44%), Positives = 55/87 (63%), Gaps = 4/87 (4%)
Frame = +3
Query: 264 IKEFEIIDFFLGPSLN----DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKC 431
IKE EIID L P +N EVL I + T +G+R RF+ A+G+ +G++GLG+
Sbjct: 44 IKEPEIIDVLL-PEVNARENQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGH 102
Query: 432 SKEVATAIRGAIILAKLSVLPVRRGYG 512
KEV AIR AI AKL+++ ++RG G
Sbjct: 103 GKEVGIAIRKAINYAKLNIIEIKRGCG 129
Score = 66.1 bits (154), Expect = 1e-09
Identities = 32/70 (45%), Positives = 43/70 (61%)
Frame = +2
Query: 509 WGNKIGKPHTVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSALVQ 688
W + +PH+VP V GK GSV RLIP PRG G+V V KK+L++AGVQD ++ +
Sbjct: 131 WECRCRRPHSVPFAVEGKEGSVRVRLIPGPRGLGLVIGDVGKKILRLAGVQDVWSQTFGE 190
Query: 689 IGNFGKFAKS 718
FAK+
Sbjct: 191 TRTTVNFAKA 200
Score = 34.3 bits (75), Expect = 3.6
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +1
Query: 178 EWVPVTKLGRLVREGKIDKLESIYLFLYQSK 270
EW P TKLG +V+EG+I + I+ YQ K
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIK 45
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 68.5 bits (160), Expect = 2e-10
Identities = 33/51 (64%), Positives = 37/51 (72%)
Frame = +2
Query: 512 GNKIGKPHTVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQD 664
GNKI KPHTV C+VT SV I APRGT I+SAPVPKKLL+MA + D
Sbjct: 71 GNKIAKPHTVSCRVTRLYCSVLVHHISAPRGTDILSAPVPKKLLRMASIDD 121
Score = 58.8 bits (136), Expect = 1e-07
Identities = 33/68 (48%), Positives = 44/68 (64%)
Frame = +3
Query: 285 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 464
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 465 IILAKLSV 488
IIL + S+
Sbjct: 55 IILDRSSI 62
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 68.1 bits (159), Expect = 2e-10
Identities = 33/54 (61%), Positives = 38/54 (70%)
Frame = +2
Query: 590 PAPRGTGIVSAPVPKKLLQMAGVQDCYTSALVQIGNFGKFAKSHIRCHLPRTYA 751
PAPRGTGIVSAPVPKKLL MAG+ DCYTSA G FAK+ + +TY+
Sbjct: 1 PAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDA-ISKTYS 53
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 67.3 bits (157), Expect = 4e-10
Identities = 37/75 (49%), Positives = 47/75 (62%)
Frame = +3
Query: 249 LVSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVK 428
L S PIKEFE+ DF L L D+VLK+M V+KQ AG+ RFK V I N ++ LGV+
Sbjct: 10 LFSRPIKEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLGVE 69
Query: 429 CSKEVATAIRGAIIL 473
KE+ A+ IIL
Sbjct: 70 RPKELLIAVCRTIIL 84
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 66.5 bits (155), Expect = 7e-10
Identities = 39/91 (42%), Positives = 54/91 (59%)
Frame = +3
Query: 240 EHLLVSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 419
E + + L I+E II L P L EV+ + +QK T GQ TRFKA VA G+ NG++G+
Sbjct: 66 EIIELGLRIQEAGIIKKLL-PDLKSEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGI 124
Query: 420 GVKCSKEVATAIRGAIILAKLSVLPVRRGYG 512
G SK++ AI A A L+V P++ G G
Sbjct: 125 GQGKSKQMRIAIEKATNAAYLNVNPIKMGCG 155
Score = 65.3 bits (152), Expect = 2e-09
Identities = 32/81 (39%), Positives = 51/81 (62%)
Frame = +2
Query: 509 WGNKIGKPHTVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSALVQ 688
W + + H+VP KV GK GSVT +IPAPRG G+V+ K+LL++AG++D +T+A
Sbjct: 157 WECRCDQKHSVPFKVKGKGGSVTIEIIPAPRGLGLVAGGKIKRLLELAGLKDAWTTAKGS 216
Query: 689 IGNFGKFAKSHIRCHLPRTYA 751
+K+ + C L +T++
Sbjct: 217 TPTMNSTSKAILDC-LRQTFS 236
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 65.7 bits (153), Expect = 1e-09
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +3
Query: 339 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 482
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQL 48
Score = 64.1 bits (149), Expect = 4e-09
Identities = 36/82 (43%), Positives = 45/82 (54%)
Frame = +2
Query: 503 RLWGNKIGKPHTVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSAL 682
+L ++ + V KVT GSV LIPAPRGTGIVSAPV K L AG+ +CY SA
Sbjct: 47 QLGETRLSRSTLVQYKVTSHYGSVLVHLIPAPRGTGIVSAPVLTKFLMNAGIYNCYISAR 106
Query: 683 VQIGNFGKFAKSHIRCHLPRTY 748
F+K I + +TY
Sbjct: 107 CYTATLYNFSKPTIEV-ISKTY 127
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 64.1 bits (149), Expect = 4e-09
Identities = 28/78 (35%), Positives = 51/78 (65%)
Frame = +3
Query: 276 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 455
++++ G SL +V++ + V + T++G++ + K V +GD +GH+GLGVK S + I
Sbjct: 98 KLVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHVGLGVKSSMDSKAGI 157
Query: 456 RGAIILAKLSVLPVRRGY 509
+ A+ AKL++ +RRGY
Sbjct: 158 KAALRKAKLAITKIRRGY 175
Score = 59.7 bits (138), Expect = 8e-08
Identities = 24/57 (42%), Positives = 40/57 (70%)
Frame = +2
Query: 509 WGNKIGKPHTVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSA 679
W + GKP+T+ K +GK GSV + PAP+GTGIV++ +L+++G++DC+T +
Sbjct: 176 WEIEEGKPNTIKYKTSGKAGSVVVCIKPAPKGTGIVASKFQLNVLKISGIRDCFTKS 232
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 63.3 bits (147), Expect = 7e-09
Identities = 35/72 (48%), Positives = 42/72 (58%)
Frame = +2
Query: 536 TVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSALVQIGNFGKFAK 715
TV CKVTG+C SV LIP R I+SAPVPKKLL +A + DCYTSA F K
Sbjct: 162 TVSCKVTGQCVSVLICLIPPTRN--IISAPVPKKLLLLANIDDCYTSARGCTATLDNFDK 219
Query: 716 SHIRCHLPRTYA 751
+ + TY+
Sbjct: 220 ATFNA-ISNTYS 230
Score = 55.2 bits (127), Expect = 2e-06
Identities = 36/67 (53%), Positives = 41/67 (61%)
Frame = +3
Query: 255 SLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCS 434
SL K+ II FFL SL DE IMPVQ QT R FK FV+I D + H+ L KCS
Sbjct: 84 SLLNKKSMIIGFFLRTSLRDE---IMPVQTQTWLPSRP-FKDFVSIRDYSSHVDLDDKCS 139
Query: 435 KEVATAI 455
K+ ATAI
Sbjct: 140 KKTATAI 146
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 63.3 bits (147), Expect = 7e-09
Identities = 30/81 (37%), Positives = 50/81 (61%)
Frame = +2
Query: 509 WGNKIGKPHTVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSALVQ 688
W + + H+VP KV GK GSV ++PAPRG G+V+ ++LL++AG++D YT+A
Sbjct: 138 WECRCDQKHSVPFKVRGKGGSVVIEILPAPRGLGLVAGGKIRRLLELAGLKDAYTTAKGS 197
Query: 689 IGNFGKFAKSHIRCHLPRTYA 751
+K+ + C L +T++
Sbjct: 198 TPTTNSTSKAVLEC-LRQTFS 217
Score = 61.3 bits (142), Expect = 3e-08
Identities = 36/83 (43%), Positives = 50/83 (60%)
Frame = +3
Query: 264 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 443
I+E II L P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G +K++
Sbjct: 55 IQESGIIKKLL-PDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQM 113
Query: 444 ATAIRGAIILAKLSVLPVRRGYG 512
AI A A L+V P++ G G
Sbjct: 114 RIAIEKANNQALLNVGPIKLGCG 136
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 57.6 bits (133), Expect = 3e-07
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Frame = +3
Query: 297 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 476
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 477 KLSVL--PVRRGYGVTR---*ESHTPSLARSPASV 566
K + + P+ + Y + E S+ PASV
Sbjct: 128 KKTAITVPITKDYSLPHRLDVEWGAASVMMKPASV 162
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 57.2 bits (132), Expect = 4e-07
Identities = 32/69 (46%), Positives = 41/69 (59%)
Frame = -3
Query: 717 LLANFPKLPI*TRADV*QSCTPAI*RSFLGTGADTIPVPRGAGISRNVTEPHLPVTLQGT 538
+LA PK+ + A V QS P+ FLGT A+ +PVP GAG+ TEP P+TL G
Sbjct: 9 VLAKSPKVAVQPLAHVQQSSIPSSSSHFLGTEAEVMPVPMGAGMKSTRTEPQWPITLCG- 67
Query: 537 VCGFPILLP 511
+CG LLP
Sbjct: 68 LCGACCLLP 76
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 57.2 bits (132), Expect = 4e-07
Identities = 29/50 (58%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = +2
Query: 512 GNKIGKPHTVPCKVTG-KCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGV 658
GNKIG PHT+PC VT + V L APRGTG VSA VPKKL +A +
Sbjct: 123 GNKIGNPHTIPCDVTATEKNLVLVCLTTAPRGTGTVSASVPKKLPLLASI 172
Score = 48.8 bits (111), Expect = 2e-04
Identities = 34/83 (40%), Positives = 42/83 (50%)
Frame = +3
Query: 261 PIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKE 440
P +II+FFLG L DEVL+ M Q QRTR K F + + L V CSKE
Sbjct: 46 PFSSSDIIEFFLGEHLKDEVLRTMLAQ-----NQRTRIKVFFFLTIRSPMTTL-VNCSKE 99
Query: 441 VATAIRGAIILAKLSVLPVRRGY 509
V TA + AI L + + GY
Sbjct: 100 VGTAAQRAITLLSF-LFSTQTGY 121
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 54.8 bits (126), Expect = 2e-06
Identities = 28/54 (51%), Positives = 36/54 (66%)
Frame = +3
Query: 258 LPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 419
+ IKE++I+D L L +EV+ I VQKQT G+ R KA VAIGD+NGH L
Sbjct: 60 IKIKEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKEPRLKASVAIGDHNGHRAL 112
Score = 34.3 bits (75), Expect = 3.6
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +1
Query: 187 PVTKLGRLVREGKIDKLESIYLF 255
PVTKLGRLV++GK+ ++ I+ F
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEF 58
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 54.8 bits (126), Expect = 2e-06
Identities = 24/54 (44%), Positives = 35/54 (64%)
Frame = +2
Query: 509 WGNKIGKPHTVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 670
W G PH++P +V GK GSV L PAP+G GIV+ KK+ ++AG++D +
Sbjct: 131 WECACGAPHSIPYQVEGKSGSVRVILKPAPKGVGIVADDEIKKIFRLAGIKDVW 184
Score = 52.4 bits (120), Expect = 1e-05
Identities = 23/58 (39%), Positives = 37/58 (63%)
Frame = +3
Query: 339 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYG 512
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL+++ V RG G
Sbjct: 72 QKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVARGCG 129
Score = 37.1 bits (82), Expect = 0.51
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 175 KEWVPVTKLGRLVREGKIDKLESI 246
+EW P TKLGRLV+EGKI ++ I
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEI 28
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 52.8 bits (121), Expect = 1e-05
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +3
Query: 306 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 485
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 486 VLPV 497
++ V
Sbjct: 72 LISV 75
Score = 40.3 bits (90), Expect = 0.054
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +2
Query: 536 TVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSAL 682
T+P ++ G+ GS + PA GTG++S + +L++AGV D T +L
Sbjct: 81 TIPHEIHGQFGSGNVLMKPAAEGTGVISGGPVRAILELAGVGDILTKSL 129
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = +3
Query: 303 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 482
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 483 SVLPVRR 503
+++ V++
Sbjct: 108 NLIKVKQ 114
Score = 39.9 bits (89), Expect = 0.072
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +2
Query: 551 VTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSA 679
V G+ G+ L+PAP GTGI++ + ++++AG D YT +
Sbjct: 124 VNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFTDIYTKS 166
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 51.2 bits (117), Expect = 3e-05
Identities = 24/71 (33%), Positives = 43/71 (60%)
Frame = +3
Query: 285 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 464
DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 465 IILAKLSVLPV 497
++ AK SV+ V
Sbjct: 566 LVDAKKSVVRV 576
Score = 34.3 bits (75), Expect = 3.6
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +2
Query: 536 TVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQD 664
T+P +V K + ++PA GTG+++ + +L++AGVQ+
Sbjct: 583 TIPHRVEAKFNAARCVMVPAADGTGVLAGSSIRSVLELAGVQN 625
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 50.4 bits (115), Expect = 5e-05
Identities = 24/66 (36%), Positives = 37/66 (56%)
Frame = +3
Query: 300 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 479
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 480 LSVLPV 497
++ +
Sbjct: 73 KQLVRI 78
Score = 35.5 bits (78), Expect = 1.5
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +2
Query: 536 TVPCKVTGKCGSVTFRLIPAPRGTGIVS-APVPKKLLQMAGVQDCYT 673
T+P G+ G+ F L PA +GTGIV+ + +L++ G+ D T
Sbjct: 84 TIPHDTIGRFGASKFFLKPASKGTGIVAGGKAARTILELVGINDVLT 130
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 49.6 bits (113), Expect = 9e-05
Identities = 24/71 (33%), Positives = 39/71 (54%)
Frame = +3
Query: 306 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 485
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 486 VLPVRRGYGVT 518
+ V+ T
Sbjct: 138 MYKVKMNKNFT 148
Score = 39.9 bits (89), Expect = 0.072
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = +2
Query: 518 KIGKPHTVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSAL 682
K+ K T+ +V GK G+ + PAP+GTG+++ K +L++ G +D Y+ L
Sbjct: 142 KMNKNFTLYHEVIGKHGAGKVLIKPAPKGTGVIAGGPIKVVLELCGFKDVYSKNL 196
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 48.8 bits (111), Expect = 2e-04
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +1
Query: 163 KEDQKEWVPVTKLGRLVREGKIDKLESIYLF 255
K + KEW+PVTKLGRLV++ KI LE IYLF
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLF 84
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 48.8 bits (111), Expect = 2e-04
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +3
Query: 312 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 491
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 492 PV 497
+
Sbjct: 71 KI 72
Score = 44.8 bits (101), Expect = 0.003
Identities = 17/49 (34%), Positives = 31/49 (63%)
Frame = +2
Query: 527 KPHTVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYT 673
K +T+P ++ GK G+ T + PA GTG+++ +++L++ GV D T
Sbjct: 75 KNNTIPHEIAGKWGATTLWMAPAYEGTGVIAGSASREILELVGVHDILT 123
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +3
Query: 312 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 491
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK +++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 492 PV 497
V
Sbjct: 77 EV 78
Score = 35.9 bits (79), Expect = 1.2
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = +2
Query: 536 TVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSAL 682
T+P +V G+ + L PA GTGI++ + ++++AG+Q+ T +L
Sbjct: 84 TIPHEVIGRQDASKVLLKPAAPGTGIIAGGTVRAVVELAGIQNILTKSL 132
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 48.0 bits (109), Expect = 3e-04
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +3
Query: 291 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 470
F ++V+ I V K T+ G+ RF A V +GD G +GLG + EV AI+ A+
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVK 97
Query: 471 LAKLSVLPV 497
AK +++ V
Sbjct: 98 EAKKNLIRV 106
Score = 37.5 bits (83), Expect = 0.38
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +2
Query: 536 TVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSAL 682
TVP +V G G+ + PA GTG+++ + ++++AG+ D Y +L
Sbjct: 112 TVPHEVIGHFGAGQVLIKPAKPGTGVIAGGPARAVIELAGIADVYAKSL 160
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 47.6 bits (108), Expect = 4e-04
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +3
Query: 312 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 491
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 492 --PVRRG 506
PV G
Sbjct: 79 TVPVENG 85
Score = 35.9 bits (79), Expect = 1.2
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +2
Query: 536 TVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSAL 682
T+P ++ G+ + L PA GTG+++ VP+ + ++AG+ + + L
Sbjct: 86 TIPHEIVGENSTSRVLLKPAGPGTGVIAGTVPRSIAELAGITNMLSKEL 134
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 47.2 bits (107), Expect = 5e-04
Identities = 19/62 (30%), Positives = 40/62 (64%)
Frame = +3
Query: 312 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 491
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 492 PV 497
V
Sbjct: 209 QV 210
Score = 33.1 bits (72), Expect = 8.3
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +2
Query: 527 KPHTVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQD 664
K T P + G G+ L PA GTG+++ + +L+MAGV++
Sbjct: 214 KYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVEN 259
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +3
Query: 312 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 464
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKA 78
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/62 (30%), Positives = 38/62 (61%)
Frame = +3
Query: 312 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 491
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 492 PV 497
V
Sbjct: 246 TV 247
Score = 33.5 bits (73), Expect = 6.2
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +2
Query: 536 TVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQD 664
T P + G G+ L PA GTG+++ + +L+MAGV++
Sbjct: 254 TFPHRADGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVEN 296
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 45.6 bits (103), Expect = 0.001
Identities = 27/72 (37%), Positives = 36/72 (50%)
Frame = +3
Query: 297 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 476
G L D V+ I V K + G+ F A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 477 KLSVLPVRRGYG 512
K + V R G
Sbjct: 102 KKHMFSVPRVRG 113
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +3
Query: 297 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 476
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 477 KLSVL--PVRRG 506
K +++ P+R G
Sbjct: 116 KKTMIRVPLREG 127
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 44.4 bits (100), Expect = 0.003
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +3
Query: 312 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 485
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 486 VLPVRRG 506
+P+R G
Sbjct: 84 FVPLRGG 90
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 43.6 bits (98), Expect = 0.006
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +3
Query: 309 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 488
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 489 LPV 497
+ +
Sbjct: 91 VKI 93
Score = 41.9 bits (94), Expect = 0.018
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +2
Query: 527 KPHTVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSA 679
K HT+P +V GK S L P+ GTGI++ + +++ AG+QD T +
Sbjct: 96 KGHTIPHEVIGKFKSARVILKPSTAGTGIIAGASVRSIVEKAGIQDVLTKS 146
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 43.6 bits (98), Expect = 0.006
Identities = 18/62 (29%), Positives = 38/62 (61%)
Frame = +3
Query: 312 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 491
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 492 PV 497
V
Sbjct: 128 RV 129
Score = 36.3 bits (80), Expect = 0.89
Identities = 17/65 (26%), Positives = 36/65 (55%)
Frame = +2
Query: 488 STSPKRLWGNKIGKPHTVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDC 667
S + K L + K +++P ++G G+ L PA GTG+++ + +L++AG+++
Sbjct: 120 SDARKALIRVPLNKINSIPHPMSGSSGAANVFLKPASGGTGVIAGGAVRTVLELAGIKNV 179
Query: 668 YTSAL 682
+L
Sbjct: 180 LAKSL 184
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 43.2 bits (97), Expect = 0.008
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +3
Query: 306 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 485
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 486 VLPV 497
V+ V
Sbjct: 88 VIRV 91
Score = 39.1 bits (87), Expect = 0.13
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +2
Query: 536 TVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSAL 682
TVP V G G+ ++PA RGTG+V+ K + ++AG D T +
Sbjct: 97 TVPHDVIGTFGATKIIVLPARRGTGVVAGGAAKPVFELAGYTDVLTKII 145
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 42.7 bits (96), Expect = 0.010
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +3
Query: 312 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 491
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 492 PV 497
V
Sbjct: 104 RV 105
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 41.1 bits (92), Expect = 0.031
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +3
Query: 312 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 491
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 492 PV 497
V
Sbjct: 79 EV 80
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 41.1 bits (92), Expect = 0.031
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +3
Query: 306 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 479
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERAR 73
>UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
pneumoniae
Length = 219
Score = 39.9 bits (89), Expect = 0.072
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +2
Query: 548 KVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSAL 682
+V G+ G+ L PAP+GTGI++ + ++++AG D YT L
Sbjct: 139 EVIGRSGASRVLLKPAPQGTGIIAGGAIRAIIELAGYSDIYTKNL 183
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 38.7 bits (86), Expect = 0.17
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +1
Query: 181 WVPVTKLGRLVREGKIDKLESIYLF 255
W PVTKLGRLV++GK+ ++ I+ F
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEF 59
>UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 38.3 bits (85), Expect = 0.22
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +2
Query: 602 GTGIVSAPVPKKLLQMAGVQDCYTSALVQIGNFGKFAKSHIRCHLPRTYALPSILTF*R 778
G+ +V+ VPKK+L+ AG++D +TS+ F K ++ L Y P + F R
Sbjct: 2 GSSVVATRVPKKVLKFAGIEDVFTSSRGSTKTLSNFVKHQMKRALNFQYKPPPLPPFLR 60
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 37.5 bits (83), Expect = 0.38
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 336 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 503
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR 405
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 37.5 bits (83), Expect = 0.38
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +3
Query: 306 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 458
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIK 121
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 37.5 bits (83), Expect = 0.38
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +3
Query: 306 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 485
L ++L V QTR G+ + +G+ NG IGLG S + A+ A ++A +
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 486 VLPVRR 503
++P+RR
Sbjct: 310 MVPIRR 315
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.51
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -1
Query: 467 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 369
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 37.1 bits (82), Expect = 0.51
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 306 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 458
L ++VL + K + G++ F A + +GD G +G G + E+ AIR
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIR 63
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 36.7 bits (81), Expect = 0.67
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +2
Query: 536 TVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSAL 682
T+P +V K G L PA GTG+++ + +L++AGV+D +L
Sbjct: 84 TLPHEVEVKFGGARVLLRPASAGTGLIAGGAVRAILELAGVEDVLAKSL 132
Score = 35.9 bits (79), Expect = 1.2
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 309 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 458
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIR 65
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 36.7 bits (81), Expect = 0.67
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +3
Query: 306 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 485
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 486 VLPV 497
++ V
Sbjct: 81 MVRV 84
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 36.7 bits (81), Expect = 0.67
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +3
Query: 312 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 491
++++ I V + G+R F A V +GD G +G G + EV AI+ A+ A+ +++
Sbjct: 91 EKIVNIARVTNVVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLI 150
Query: 492 PV 497
V
Sbjct: 151 RV 152
Score = 33.5 bits (73), Expect = 6.2
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +2
Query: 536 TVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSA 679
TVP + K + L PAP+G GI+++ + ++++AG D YT +
Sbjct: 159 TVPHEQWAKFLASKVMLKPAPKGKGIIASNSVRAVVELAGYTDIYTKS 206
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 35.9 bits (79), Expect = 1.2
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +3
Query: 318 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 497
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 35.5 bits (78), Expect = 1.5
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +3
Query: 336 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 503
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR 378
>UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3;
Bacteria|Rep: 30S ribosomal protein S5 - Rhodopirellula
baltica
Length = 177
Score = 35.5 bits (78), Expect = 1.5
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +2
Query: 536 TVPCKVTGKCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSA 679
++P +V G+ G+ LIPA GTGI++ + + + G+ D T +
Sbjct: 90 SIPHQVWGRYGAARVVLIPAGAGTGIIAGQAVRAVCEACGIHDILTKS 137
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 35.1 bits (77), Expect = 2.0
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +3
Query: 303 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 482
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A +LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 483 SVLPVRR 503
++ P+RR
Sbjct: 302 NMRPIRR 308
>UniRef50_Q1JY07 Cluster: Tryptophan synthase alpha chain; n=5;
Proteobacteria|Rep: Tryptophan synthase alpha chain -
Desulfuromonas acetoxidans DSM 684
Length = 270
Score = 34.7 bits (76), Expect = 2.7
Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Frame = +3
Query: 246 LLVSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTR-FKAFVAIGDNNGHIGLG 422
LLV LP +E E + L P + + P RA Q + + FV G G
Sbjct: 126 LLVDLPSEEREELHIHLKPKGIHLITLLAPTTPPDRAAQLLKQAQGFVYYVSMTGVTGT- 184
Query: 423 VKCSKEVATAIRGAII-LAKLSVLPVRRGYGVTR*ESHTPSLARSPASVV 569
SK +AI ++ L +LS +PV G+G+T E ++AR +VV
Sbjct: 185 ---SKVDGSAIESQVVQLRELSPVPVAVGFGITT-EQDAAAIARFSDAVV 230
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 34.7 bits (76), Expect = 2.7
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +3
Query: 294 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 473
L ++ +++++I + + G+ R+K + +G+ G IGLGV SK + I AII
Sbjct: 94 LNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLGV--SKNI--NINKAIIS 149
Query: 474 AKLSVL 491
AK+ L
Sbjct: 150 AKIKAL 155
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.7 bits (76), Expect = 2.7
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 291 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 455
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 34.3 bits (75), Expect = 3.6
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +3
Query: 303 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 482
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 483 SVLPVRR 503
++ PV R
Sbjct: 314 NMQPVPR 320
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 33.9 bits (74), Expect = 4.7
Identities = 26/79 (32%), Positives = 35/79 (44%)
Frame = +3
Query: 222 KNRQTREHLLVSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 401
K + E L P K I F G SL D+++ + + + QRT+
Sbjct: 48 KIKSQEEVCLFCCPSKSLFTITDFPGESLKDDLMMASGLGSRLLSSQRTK---------- 97
Query: 402 NGHIGLGVKCSKEVATAIR 458
GH GL CS EVATAI+
Sbjct: 98 -GHSGLSSMCSGEVATAIQ 115
>UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2;
Ostreococcus|Rep: COG0457: FOG: TPR repeat - Ostreococcus
tauri
Length = 1474
Score = 33.1 bits (72), Expect = 8.3
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 4/37 (10%)
Frame = -1
Query: 377 LETCALSGTCLFLYRHDLKNLI----IQGRAEEEIND 279
LE+CAL TC+ +Y HD+ ++ + +A+E+++D
Sbjct: 965 LESCALDDTCVIVYEHDMNRVMLCRTLVSKAKEKLSD 1001
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 8.3
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 318 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 464
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
>UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S5 - Neorickettsia sennetsu (strain Miyayama)
Length = 172
Score = 33.1 bits (72), Expect = 8.3
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 560 KCGSVTFRLIPAPRGTGIVSAPVPKKLLQMAGVQD 664
K G+ + PAP GTGIV+ +K +M GV D
Sbjct: 89 KLGASKLFIKPAPEGTGIVAGGAMRKFCEMLGVSD 123
>UniRef50_Q9NQ11 Cluster: Probable cation-transporting ATPase 13A2;
n=23; Euteleostomi|Rep: Probable cation-transporting
ATPase 13A2 - Homo sapiens (Human)
Length = 1180
Score = 33.1 bits (72), Expect = 8.3
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = -2
Query: 238 RVCRFFLREQDGRVW*QEPTLSGLPCRAHDHGRDXDRVHEDRHGLYL 98
RV R++L + +W E + DHGR D VH RHGL L
Sbjct: 161 RVLRYYLFQGQRYIW-IETQQAFYQVSLLDHGRSCDDVHRSRHGLSL 206
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 807,018,017
Number of Sequences: 1657284
Number of extensions: 17312690
Number of successful extensions: 48260
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 46015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48215
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67908372675
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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