Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0482.Seq
(797 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4471| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 6e-16
SB_11428| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 1e-15
SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0) 80 2e-15
SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 4e-11
SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 9e-10
SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 3e-09
SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_29711| Best HMM Match : Peptidase_C1 (HMM E-Value=6.9e-06) 40 0.002
SB_49777| Best HMM Match : Peptidase_C1 (HMM E-Value=0) 37 0.022
SB_24991| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.35
SB_50102| Best HMM Match : Phage_fiber (HMM E-Value=8.2e-06) 31 1.4
SB_39997| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_14151| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_6295| Best HMM Match : WSC (HMM E-Value=3.8e-10) 29 4.4
SB_54948| Best HMM Match : PAN (HMM E-Value=0.0035) 29 4.4
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_4471| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 331
Score = 81.8 bits (193), Expect = 6e-16
Identities = 33/54 (61%), Positives = 43/54 (79%)
Frame = +3
Query: 507 AVDWRKHGAVTDIKDQGKCGSCWSSARLELWEGQHFRQSGYLVSLSEQNLIDCS 668
++DWR G VT +K+QG+CGSCW+ + EGQHFR++G LVSLSEQNL+DCS
Sbjct: 118 SIDWRSKGYVTPVKNQGQCGSCWAFSTTGALEGQHFRKTGKLVSLSEQNLVDCS 171
Score = 52.0 bits (119), Expect = 5e-07
Identities = 52/177 (29%), Positives = 73/177 (41%), Gaps = 6/177 (3%)
Frame = +1
Query: 250 RGEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHHEFVKTMNGFNKTAKH 429
+ E+ R I+ + I HN+ G S+KL MN GDM E +T+ G K KH
Sbjct: 43 KNEETMRNFIWQNNLKKIVTHNE----GKHSFKLAMNHLGDMTSLEISQTLLGL-KLKKH 97
Query: 430 NKNLYMKGGSVRGAKFISPANVKLPER--W-TGGSTAPSPTSRTKGS---VAHAGLQHDW 591
++ +GA F+ PANVK+ + W + G P GS + G
Sbjct: 98 AES------QPKGATFLPPANVKVVDSIDWRSKGYVTPVKNQGQCGSCWAFSTTGALEGQ 151
Query: 592 SFGKDSTSVSPATWCXXXXXXXXXXXXXXEQRLQRGAHGQRFKYIKDNGGIDTEQTY 762
F K VS + G F+YIK+NGGIDTE++Y
Sbjct: 152 HFRKTGKLVS-----LSEQNLVDCSGKYGNNGCEGGLMDNAFQYIKENGGIDTEKSY 203
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/49 (48%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +2
Query: 578 FSTTGALGRTALPSVRLPGVALGAKPHRLL---GAYGNNGCNGGLMDNA 715
FSTTGAL R G + L+ G YGNNGC GGLMDNA
Sbjct: 142 FSTTGALEGQHF---RKTGKLVSLSEQNLVDCSGKYGNNGCEGGLMDNA 187
>SB_11428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 521
Score = 81.0 bits (191), Expect = 1e-15
Identities = 37/82 (45%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Frame = +3
Query: 426 TQQESVHEGWERPRG*VHIAGQR-EAAGAVDWRKHGAVTDIKDQGKCGSCWSSARLELWE 602
T S + + + +G +A + VDWRK G VT +K+QG+CGSCW+ + E
Sbjct: 308 TGMRSHYSNYTKKQGSAFLAPSHVQVPDTVDWRKEGYVTPVKNQGQCGSCWAFSTTGSLE 367
Query: 603 GQHFRQSGYLVSLSEQNLIDCS 668
GQ+F+++G LVSLSEQNL+DCS
Sbjct: 368 GQNFKKTGKLVSLSEQNLVDCS 389
Score = 48.0 bits (109), Expect = 9e-06
Identities = 50/175 (28%), Positives = 70/175 (40%), Gaps = 6/175 (3%)
Frame = +1
Query: 256 EDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHHEFVKTMNGFNKTAKHNK 435
E+ R I+ ++ I KHN + S+ L MN GD+ EF G H
Sbjct: 263 EEGARKAIWRDNLKKIQKHNAEGH----SFTLAMNHLGDLTQDEFRYFYTGMRS---HYS 315
Query: 436 NLYMKGGSVRGAKFISPANVKLPER--WTG-GSTAPSPTSRTKGSV---AHAGLQHDWSF 597
N K GS F++P++V++P+ W G P GS + G +F
Sbjct: 316 NYTKKQGSA----FLAPSHVQVPDTVDWRKEGYVTPVKNQGQCGSCWAFSTTGSLEGQNF 371
Query: 598 GKDSTSVSPATWCXXXXXXXXXXXXXXEQRLQRGAHGQRFKYIKDNGGIDTEQTY 762
K VS + Q G FKYIK+NGGIDTE++Y
Sbjct: 372 KKTGKLVSLSE-----QNLVDCSTAYGNNGCQGGLMDYAFKYIKENGGIDTEESY 421
Score = 33.9 bits (74), Expect = 0.15
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +2
Query: 578 FSTTGALGRTALPSVRLPGVALGAKPHRLLG---AYGNNGCNGGLMDNA 715
FSTTG+L + + G + L+ AYGNNGC GGLMD A
Sbjct: 360 FSTTGSLEGQ---NFKKTGKLVSLSEQNLVDCSTAYGNNGCQGGLMDYA 405
>SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0)
Length = 1220
Score = 79.8 bits (188), Expect = 2e-15
Identities = 34/54 (62%), Positives = 43/54 (79%)
Frame = +3
Query: 507 AVDWRKHGAVTDIKDQGKCGSCWSSARLELWEGQHFRQSGYLVSLSEQNLIDCS 668
+VDW + G VT +K+QG+CGSCW+ + EGQHFR++G LVSLSEQNLIDCS
Sbjct: 46 SVDWSQKGYVTGVKNQGQCGSCWAFSTTGSVEGQHFRKTGSLVSLSEQNLIDCS 99
Score = 38.3 bits (85), Expect = 0.007
Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +2
Query: 578 FSTTGALGRTALPSVRLPGVALGAKPHRLL---GAYGNNGCNGGLMDNA 715
FSTTG++ R G + L+ G+YGNNGC GGLMDNA
Sbjct: 70 FSTTGSVEGQHF---RKTGSLVSLSEQNLIDCSGSYGNNGCQGGLMDNA 115
Score = 32.3 bits (70), Expect = 0.47
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 691 QRGAHGQRFKYIKDNGGIDTEQTY 762
Q G F+YI+ NGGIDTE +Y
Sbjct: 108 QGGLMDNAFRYIESNGGIDTESSY 131
>SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 65.7 bits (153), Expect = 4e-11
Identities = 28/53 (52%), Positives = 36/53 (67%)
Frame = +3
Query: 510 VDWRKHGAVTDIKDQGKCGSCWSSARLELWEGQHFRQSGYLVSLSEQNLIDCS 668
VDWRK GAV +K QG CGSC++ A EG HF Q+G + LSEQ ++DC+
Sbjct: 503 VDWRKAGAVNSVKSQGICGSCYAFAVAGALEGAHFIQTGLKLDLSEQQIVDCT 555
>SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 61.3 bits (142), Expect = 9e-10
Identities = 28/63 (44%), Positives = 37/63 (58%)
Frame = +3
Query: 480 IAGQREAAGAVDWRKHGAVTDIKDQGKCGSCWSSARLELWEGQHFRQSGYLVSLSEQNLI 659
+A + ++W GAVT +KDQ CGSCWS EG F ++ YL LS+QNL+
Sbjct: 634 MASINDVPDEMNWVIRGAVTPVKDQAVCGSCWSFGTTGTIEGTLFLKTKYLTRLSQQNLM 693
Query: 660 DCS 668
DCS
Sbjct: 694 DCS 696
>SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 589
Score = 59.7 bits (138), Expect = 3e-09
Identities = 25/40 (62%), Positives = 32/40 (80%)
Frame = +3
Query: 552 QGKCGSCWSSARLELWEGQHFRQSGYLVSLSEQNLIDCSE 671
Q +CGSCW+ + EGQHFR++G LVSLSEQNL+DCS+
Sbjct: 342 QCQCGSCWAFSSTGSLEGQHFRKTGKLVSLSEQNLVDCSK 381
Score = 31.9 bits (69), Expect = 0.62
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +2
Query: 674 YGNNGCNGGLMDNA 715
YGNNGC GGLMD A
Sbjct: 383 YGNNGCEGGLMDYA 396
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1
Query: 718 KYIKDNGGIDTEQTYLTRGVDDQ 786
+YIK+N GIDTEQ+Y D Q
Sbjct: 450 RYIKNNDGIDTEQSYPYTARDGQ 472
>SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/55 (45%), Positives = 35/55 (63%)
Frame = +3
Query: 504 GAVDWRKHGAVTDIKDQGKCGSCWSSARLELWEGQHFRQSGYLVSLSEQNLIDCS 668
G D K GAV+ ++ QG CGSC++ A + EG +F ++G L LS Q +IDCS
Sbjct: 315 GEYDQHK-GAVSPVRGQGICGSCYALAAVGAVEGAYFMKTGKLKELSAQQVIDCS 368
>SB_29711| Best HMM Match : Peptidase_C1 (HMM E-Value=6.9e-06)
Length = 385
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = +3
Query: 528 GAVTDIKDQGKCGSCWSSARLELWEGQHFRQSGY 629
GAV K QG CGSCW+ A E HF Q G+
Sbjct: 141 GAVNPAKGQGTCGSCWAFATAGAVEAAHFIQEGF 174
>SB_49777| Best HMM Match : Peptidase_C1 (HMM E-Value=0)
Length = 298
Score = 36.7 bits (81), Expect = 0.022
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +3
Query: 516 WRKHGAVTDIKDQGKCGSCWSSARLELWEGQH--FRQSGYLVSLSEQNLIDCSE 671
W + +++DQG CGSCW+ +E ++ + + +S ++L+ C E
Sbjct: 95 WPHCPTIKEVRDQGACGSCWAFGAVEAMSDRYCIHSEGKVMPHISAEDLLSCCE 148
>SB_24991| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1146
Score = 32.7 bits (71), Expect = 0.35
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 7/84 (8%)
Frame = +1
Query: 217 LQAAAPSQLRKRGEDNF-RMKIYAEHKHI------IAKHNQKYEMGLVSYKLGMNKYGDM 375
L A PS L RG D K+Y + HI + K +++Y + L Y +G
Sbjct: 63 LGIAPPSGLNLRGADKAANWKVYKQQWHIYVIVTQLEKQSEEYRVALFLYSIGS------ 116
Query: 376 LHHEFVKTMNGFNKTAKHNKNLYM 447
E VKT N F+ T + K L M
Sbjct: 117 ---EAVKTYNSFDMTEEDRKKLTM 137
>SB_50102| Best HMM Match : Phage_fiber (HMM E-Value=8.2e-06)
Length = 274
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 427 HNKNLYMKGGSVRGAKFISPANVKLPER-WTGGSTAPSPTSRTKGSVAH 570
HN +L+ +G + + ++ N R WT G+T + + T+G+ H
Sbjct: 17 HNSSLWTQGNTTHNSSLLTQGNTTHNSRLWTQGNTTHNSSLWTQGNTTH 65
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Frame = +1
Query: 310 HNQK-YEMGLVSYKLGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISP 486
HN + G ++ + G+ H+ + T N T HN +L+ +G + + ++
Sbjct: 138 HNSSLWTQGNTTHNSSLWTQGNTTHNSSLWTQG--NTT--HNSSLWTQGNTTHNSSLLTQ 193
Query: 487 ANVKLPER-WTGGSTAPSPTSRTKGSVAH 570
N WT G+T + + T+G+ H
Sbjct: 194 GNTTHNSSLWTQGNTTHNSSLWTQGNTTH 222
>SB_39997| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 510 VDWRKHGAVTDIKDQGK 560
VDWR+ G VT +K+QGK
Sbjct: 44 VDWRQQGYVTPVKNQGK 60
>SB_14151| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 241
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Frame = +1
Query: 310 HNQK-YEMGLVSYKLGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISP 486
HN + G ++ + G+ H+ + T N T HN +L+ +G + + ++
Sbjct: 105 HNSSLWTQGNTTHNSSLWTQGNTTHNSSLWTQG--NTT--HNSSLWTQGNTTHNSSLLTQ 160
Query: 487 ANVKLPER-WTGGSTAPSPTSRTKGSVAH 570
N WT G+T + + T+G+ H
Sbjct: 161 GNTTHNSSLWTQGNTTHNSSLWTQGNTTH 189
>SB_6295| Best HMM Match : WSC (HMM E-Value=3.8e-10)
Length = 281
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = +1
Query: 247 KRGEDNFRMKIYAEHKHIIAKHNQ---KYEMGLVSYKLGMNKY 366
+ G +RM + A+ + ++AK+ KY MG+ Y++G+ KY
Sbjct: 142 RMGVAKYRMGV-AKCRMVVAKYRMGVAKYRMGVAKYRMGVAKY 183
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = +1
Query: 247 KRGEDNFRMKIYAEHKHIIAKHNQ---KYEMGLVSYKLGMNKY 366
+ G +RM + A+++ +AK+ KY MG+ Y++G+ KY
Sbjct: 163 RMGVAKYRMGV-AKYRMGVAKYRMDVAKYRMGVAKYRMGVAKY 204
>SB_54948| Best HMM Match : PAN (HMM E-Value=0.0035)
Length = 396
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/60 (31%), Positives = 23/60 (38%)
Frame = -2
Query: 448 SCTDSCCVWQFCXXXXXXXRTRGGACLRTCSCPACKKRGPFRTSGCVWR*CACAQRISSC 269
SC++ CC+ Q C GG C+ C P KK T C R C SC
Sbjct: 129 SCSNGCCLGQRC--------LNGGTCVEHCEDPK-KKFSCACTPSCSGRTCESCGTYRSC 179
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +1
Query: 478 ISPANVKLPERWTGGSTAPSPTSRTKGSVAHAGLQHDWSF 597
I+P N K WT + APSPT+ T G A Q D SF
Sbjct: 1694 ITPVNAKPTNPWT--TPAPSPTATTVGPTL-APSQWDCSF 1730
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,360,072
Number of Sequences: 59808
Number of extensions: 532932
Number of successful extensions: 1698
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1662
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2203769656
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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