Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0480.Seq
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    24   0.85 
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    24   0.85 
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   3.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.5  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 24.2 bits (50), Expect = 0.85
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -1

Query: 61  LSFLRAVVLCRSTTNGDL 8
           L+ L+ + L R TTNGDL
Sbjct: 321 LNVLKKIALRRQTTNGDL 338


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 24.2 bits (50), Expect = 0.85
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -1

Query: 61  LSFLRAVVLCRSTTNGDL 8
           L+ L+ + L R TTNGDL
Sbjct: 247 LNVLKKIALRRQTTNGDL 264


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +3

Query: 393 FRSNNDLLEILKRKRAQAAEAKSRGSTVQNPGLPFR 500
           FR   ++  I + ++  AAE K    T +N   PF+
Sbjct: 105 FRLKFNISSIPRHEKLTAAEIKLTRETAKNTSHPFQ 140


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 490 CLSGASATLPN*ITVVRNVPT 552
           C  GAS+  PN   +++ VPT
Sbjct: 766 CKKGASSDKPNFTKLIQVVPT 786


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,588
Number of Sequences: 336
Number of extensions: 2485
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)